Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------HSFB2a(2)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             ------->TEIL                                 --------->MYB46(3)          --------->ARR14(2)                                --------->DEAR3(2)           --------->AGP1                               --------->MYB52(1)            <---------AGP1                            --------->ANAC58                 --------->ARR11(3)               <------                            --------->ANAC46                 <---------ARR14(2)          --------->LBD16                            --------->ANAC58            --------->MYB52(1)              --------->HSFB2a(2)                          --------->MYB52(1)       --------->KAN4(2)                    <---------HSFB2a(2) -------->DOF2          <---------MYB52(2)        <---------KAN4(1)===========================HOX2a_HOX2a ---->DOF2         <---------REM1(1)              --------->KAN4(1)<------ZmHOX2a(1)   ------>ZmHOX2a(2)   agaaagcttatgtttttatacatgtagcaaacgaaacgaccagactgagagattgttccaacggatctaggaatgacttaaactcgtgatccagaaacta  23234900                                                               <---------ANAC46                                                               <---------ANAC58                                                               ----------->GT1                                                           ---------->DOF2                                                      --------->WOX13(1)                                                   --------->ANAC46                                       <---------ATHB12  --------->YAB1                                     --------->WOX13(1) <---------ATHB12                                   <---------YAB1  --------->ANAC58                                <-         --------->DEAR3(2)       --------->TOE2(3)--------->ANAC58                                <-        --------->SPL7           --------->YAB1   --------->WOX13(1)                             ----      <---------SPL7      =============================HOX2a_HOX2a                              -----     ------>ZmHOX2a(2)    <------ZmHOX2a(1)    --------->AGP1  <---------ANAC58              <------ZmHOX2a(1)     ============================HOX2a_HOX2a   --------->ARR11(3)                     ----------->RAV1(1) ---MYB52(2) ----------->HVH21  <---------ATHB12<------ZmHOX2a(2)                    --------->MYB46(3)   tcgatgatcgtacagacgaccgataacaggacgaatcatcaatgaaacagatcaagcaatcaaaagcgtgaattgatgacacatacaacaacacaggaac  23235000                                        --------->MYB52(1)                             --------->DAG2                            --------->DAG2                                                 --------->ZAT18                           ---------->DOF2    <----------DOF2                              --------->ZAT14     ---------->DOF2   <----------ID1   ------>MYB83                                       <---------ZAT18 --------ATHB51       ----------->GT1   ------>MYB46(1)                                <------------- --------YAB1       ---------->DOF2   <---------MYB59                           --------->ANAC46 ----->YAB1  --------->TOE1(3)        --------->AtMYB61                      <---------REM1(2) ------>GT1  --------->TOE2(3)     <---------ARR14(2) ----------->GT1     <---------ZAT6   <---------ZAT14   gataattgaaagaaaccctaaaaaaaggaaaaaggcgaaacctaacctctttggaatggtgaagacactcgaggtagtcttcacgaagaagagtacagtc  23235100                                                                                        ------>NtERF2                                                                                       --------->ANAC58                                                                                       --------->bZIP60(1)                                                                                       --------->DEAR3(1)                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                                      --------->SPL7                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                         ------>MYB46(1)             <---------ALFIN1                                               --------->YAB1                       ----------->HVH21                                            --------->GLK1(1)                       --------->ANAC46                                         --------->LBD16 ------>MYB83               --------->DEAR3(1)                                        --------->HSFB2a(2) <----------DOF2    <---------ALFIN1                                        <---------HSFB2a(2) <---------MYB52(1) --------->AtMYB61                                <---------GLK1(1)      --------->DEAR3(1)     --------->MYB46(3)         --------->ZAT14        --------->GLK1(1)   <---------ALFIN1   <---------MYB52(1)  <---------ZAT18    <-------TEIL     --------->AtLEC2 --------->AtMYB61    --------->ANAC46 --AtSPL8<---------ZAT14   --------->At4g35610 ----------->GT1   <-----------GT1------>NtERF2  <-----   tttgggctctctgcaatgagacatacattcgctgaaatccatccagaaatcgtaacacctccctttgtttcccgttatcccccaccccgacgccattttt  23235200                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                                                         --------->GLK1(2)                                                         <---------ARR14(2)                                                        <------ZmHOX2a(1)                               ---------->ID1           ==============HOX2a_HOX2a              ------                  --------->LBD16                     <---------TOE1(2)                        <-----                 <-----------RAV1(2)                 <---------LBD16               --------->YAB1                 <---------HSFB2a(2)                 --------->LBD16   ----------->GT1     --------->LBD16                 <---------LBD16                <---------GLK1(1)     <---------TOE2(3)   --------->ANAC58   ------>ZmHOX2a(1)<------ZmHOX2a(1)           --------->GLK1(1)     <---------TOE1(3)   --------->ANAC46 ------GT1      --------->TOE1(2)          ----------->RAV1(2) <------ZmHOX2a(2)   *TSS   --------->ANAC58   ccttcctctctctctaatcccaggagaaatttagtcgtcttcttcgcctgatttccgaggatccgatctattcaggttaatccaattagaacccgaaata  23235300                                                                                          -------->ATHB1                                                                                          --------->ATHB51                                                                                          --------->YAB1                                                                                          <---------ICU4                                                                                    ----------->GT1                                                                                   <---------TOE2(3)                                                                              <---------ZAT6                                                                            --------->MYB52(2)                                                                          <---------MYB52(1)       <-                         --------->TOE1(3)                               --------->TOE2(3)<--------HAHB4                         --------->TOE2(3)                              <---------ANAC58  -------->HAHB4                       <---------TOE2(3)                ------------>CBF<---------ANAC55(2)     -----           <---------AHL20(2)                        <---------ARR11(3) <---------YAB1   --------->ICU4     <----------DOF2   <---------TOE1(3)             --------->ARR11(3) <---------ANAC58 <---------YAB1  ------->TEIL        <---------DOF5.7(2)      <----------DOF2        <-----------GT1    <---------ATHB51 --->AHL20(2)       --------->DOF5.7(2)     <---------ALFIN1    ------>ZmHOX2a(1)  <---------TOE1(3) ----AHL20(2)      <----------DOF2      <---------PCF2--------->GLK1(1) --------->ANAC55(2)  <-------   aatgtgcctttatattatgggctttaacgtaaacacttcatgggcccaactttgagatatcaattcctgtaattacgttagtgtgaaggtaattattacc  23235400              ------>ZmHOX2a(1)                                                       <---------ETT(2)             --------->TOE2(3)                                                       <---------------             --------->ANAC55(2)                                                 --------->At4g35610             <---------ANAC55(2)                                                 --------->ZAT2             --------->TOE1(3)                                                   <---------At4g35610     <-----------GT1                                                  <---------AHL20(2)    <-----------GT1                                                  --------->AHL20(2) --------GLK1(2)     ---------->DOF2     <----------DOF2--------->AHL20(2)       <---------ZAT2 ---->HSFB2a(2)    --------->TOE2(3)  <-----------GT1 <----------DOF2<---------AHL20(2)          ---- ----GT1  <---------MYB52(1)<------ZmHOX2a(1) <-----------GT1        <---------AHL20(1)         -----   agaattttacccgttccttaacattaagcaggaattgttgttactttgttactaggcttttaatagtttaataaaatttagtctgctgtcgaaaaaaaaa  23235500                             <------MYB83                             <------MYB46(1)                             <---------MYB46(3)                                               -------                       <---------ANAC58                                                       -------    ---------->DOF2    <---------ANAC58                                        <---------ANAC55(2) --------->ZAT18<---------YAB1                                                 --------->ANAC55(2) ------WRI1  <---------MYB52(1)                                   <---------YAB1           --------->YAB1 ----->DAG2 <---------DAG2  <---------AtMYB61     ----------->RAV1(2)        --------->MYB52(1)     < ----->DOF2 <----------DOF2<--------P  <---------GLK1(2)       <---------ARR14(2)         <---------YAB1   aagtgcaaaagttcctttatgtttgacttgttggtggattagaatttcaaacccctgatttagcagttcttaatggccattacggactatatatgatagt  23235600                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                  --------->YAB1                                                          <----------DOF2        <---------YAB1                 ----------->GT1                    <---------ICU4              <---------AHL20(2)      <-----------HVH21     <---------AHL20(2)   <---------AHL20(2)             --------->AHL20(2) --------->AHL20(2)     <---------AHL20(2)      --------->AHL20(2)              <---------AHL20(1) <---------AHL20(2)    <---------AHL20(1)       <---------AHL20(2)              --------->AHL20(1) -->YAB1        <---------TOE2(3)           <---------AHL20(2)                 --------->AHL20(2)---- ---->GT1     <---------AHL20(2)            --------->AHL20(2)                 --------->YAB1   ----- ---------AHL20(2)     --------->AHL20(1)  --------->AHL20(2)           ---------->DOF2        ------   aatttatatgtcatatataatgttatatattttatatataaaacatttaattaaatatgactttagtttttttttaaagaattatattaatttttggtaa  23235700                         --------->AHL20(2)                       <-----------GT1                  --------->ANAC46                    <---------AHL20(2)                  <---------TOE2(3)     <---------MYB46(3)----------->GT1 <---------AHL20(2)      <---------AHL20(2)   <-----------GT1<---------AHL20(2)               <------ ------->GT1     <---------LBD16       <--------P    --------->AHL20(1)     ---------->DOF2<--------- ---->DAG2       <---------At5g28300  <-------GAMYB  --------->AHL20(2) <----------DOF2   <---------ANAC58 ---->DOF2      <-----------GT1 --------->ATHB12     <---------AHL20(2) <---------DAG2    <---------ANAC58   agtttaattctagtatttttacggtattaaaaaatgtttgggttgttttttcaaatttaatagttaattttccacttttaaagaaaacaattgcttttca  23235800  Previous    Next  AGI:  At3g62790.1    Description:  NADH-ubiquinone oxidoreductase-related. similar to NADH-ubiquinone oxidoreductase-related [Arabidopsis thaliana] (TAIR:AT2G47690.1); similar to NADH-ubiquinone oxidoreductase-like protein [Camellia sinensis] (GB:ABY77914.1) Range:  from: 23234036    to: 23235283    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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