Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------WRKY18(1)                                                        ----------->HVH21                                                   <---------ARR14(2)                                                   ------->TEIL                                                   --------->ARR14(2)                                                  <---------ARR14(1)                                                  <---------CCA1(2)                                                --------->ANAC55(2)                                                <---------ANAC58                                                <---------ANAC55(2)                                                <---------ANAC55(1)                                                <---------bZIP60(2)                                                <---------ANAC46                                                <---------O2                                       --                                   <---------ARR14(2)   --------->WRKY12                           --                                 --------->LBD16<---------ANAC58                                   <-                               ----------------->AGL1   --------->WRKY38(1)                   <------                               <-----------------AG<---------ARR11(1)                      <---------ARR11(3)                               <---------LBD16 ----------->STF1                            --------->ARR11(3)                            --------->GLK1(1)----------->TGA1                         --------->LBD16                            <---------GLK1(1)----------->HVH21                       <---------HSFB2a(2)                 --------->RAP2.6(3)       --------->ANAC55(2)                       --------->HSFB2a(2)    ----------->GT1   <----------DOF2      <---------ANAC55(2)                      ------>ZmHOX2a(2) ---->HVH21     --------->ARR14(2) --------->ARR14(2)   --------->WRKY45          --------->ARR11(3)   acgaataagtgaaactaatatcggctttggatttcccgatttgatatgtgacgtatctttgaccggtcttatcgtttccaagatgatccagaagttcttt  23233600                                               --------->ANAC58                                               --------->ANAC58                                             <---------ANAC58                                             <---------ANAC58                                             <---------ANAC46                                         ------->MYC3                                   --------->At4g35610                                         <-------MYC3                                   <---------At4g35610                                        <---------O2                           <---------MYB52(1)                 --------->DEAR3(1)     --------->ANAC46     ---------->DOF2  <-------GAMYB ------->At4g35610                    <---------ALFIN1   ------>ZmHOX2a(2)   <---------DEAR3(2) --------->RAV1(2)                  ------>ZmHOX2a(1)  --------->ARR11(3)    <---------MYB46(3) --------At4g35610                  ============================HOX2a_HOX2a <---------DEAR3(1) ----DOF2 ------->TEIL  <----------DOF2 --------->O2   <---------ARR11(3) ------------>AtMYB77   <---   cacctgaacatgaacctcgccgatgtctttatctactcctccacgttgctcgcacttgatcttgaaagtgatcacaaggcggttagcctctgctaagttt  23233700                                                                                  <---------MYB46(3)                                  <-----------RAV1(1)                      ----------->HVH21                           <-----------------AGL2     <---------ANAC58   <---------ZAT2                     <---------YAB1                <---------CCA1(2)     --------->ZAT2                     --------->ICU4              --------->DEAR3(1)      --------->At4g35610                   <---------TGA2(1)          <---------ALFIN1        --------->At4g35610                   --------->TGA2(1)       --------->ARR14(2)         <---------At4g35610                   --------->bZIP60(1)     <---------TCP20          --------->ZAT18        <---------          ------->TEIL<---------ICU4     <------MYB83 <---------ANAC58<------NtERF2<-----------HVH21     <------ZmHOX2a(1)--------->ATHB12   <---------MYB46(3)  <---------ANAC46    --------->ALFIN1 ------AtMYB61     <---------bZIP60(1)   <------MYB46(1)    ------>NtERF2<---------At4g35610       <-   tggtcgaggatgaacttcatgacatcattgctccatttggggctggttccaccgtctcttgccgcttgtgtccgctgctcacggtggtcagagcattttg  23233800                                                                                          ---------->ID1                                                                                      ------>ZmHOX2a(2)                                                                               <---------HSFB2a(2)                                                                               --------->HSFB2a(2)                                                                         <---------AHL20(2)                                                                 <-----------HVH21   <------ZmHOX2a(2)                                                                <---------TGA2(1)   <---------ARR11(3)               --------->ANAC46                                 <---------bZIP60(1) --------->ARR14(3)    --------->LBD16                                             --------->TGA2(1)   --------->ARR11(3)  <---------LBD16             <-------TEIL                      --------->bZIP60(1)<---------GLK1(1) --------->MYB52(1)--------->RAP2.6(2)     <----------DOF2    <---------TGA2(2)--------->HSFC1(1) -DOF2       --------->MYB52(1)      --------->ANAC46  <----------DOF2   --------->AHL20(2) -----ZmHOX2a(2)   ----------->RAV1(1)  <---------ALFIN1   <---------At4g35610 <---------HSFC1(1)  <-   gatcaccggataacttcacggccacaaaaacatccatcttcgacactttcttaagcccttttgctgatgtcacatttatttctagagatctcgtccccat  23233900                                                                                                    <                                                                                                  <--                 --------->DAG2                                                           <---------AHL20(2)                ---------->DOF2                                                         <-----------TBP            <---------ATHB12                                                          ---------------        --------->MYB46(3)                                                      --------->YAB1    ---     <-----------GT1                             <------ZmHOX2a(1)     ---------->DOF2<-------------- --------YAB1--------->YAB1               <---------ANAC55(2)         *TSS ------------>CBF      <---   tttgatattacccaatgaaaaagctggttctctctagacacattacatataggagttgcagagaagactaagtgaaagtcaatgacaactatttatagag  23234000                                                                                      <---------TOE2(3)                                                                                <---------YAB1                  ------>MYB46(1)                                             <-----------GT1          <-----------GT1                                                  --------->ATHB51        <---------ICU4                               --------->AHL20(2)    --------->YAB1     --------->YAB1                                  <---------AHL20(2)    -------->HAHB4    <---------YAB1------>MYB83                   <---------ICU4            <---------ICU4 <----------DOF2 <---------ALFIN1               --------->ICU4             -------->ATHB1 ---------DAG2 >>>>>>>>>>>>>>>>>LFY             <---------YAB1            --------->ICU4 -------ARR11(3)--------->MYB46(3)            --------->YAB1              <---------ATHB51 >AGL15<---------YAB1<---------ZAT14          <---------ICU4              <---------YAB1 ------>ARR11(3)<---------MYB55(2)           --------->ICU4          ----------->GT1--------->AHL20(2) -AGL15--------->ICU4--------->ZAT14    --------->HSFB2a(2) <-----------GT1<--------HAHB4   <------ZmHOX2a(1) ---ZmHOX2a(1) --------->ANAC46<---------AHL20(2)--------->ATHB12   <------ZmHOX2a(1)---------->DOF2   gaccttttcattattccacccactgttctgtttttaatgtctctcgaataatgattttaatataactgtaggagtaattattaccattaaagaaggagtc  23234100                                       <---------TOE2(3)                                     ---------->DOF2                                    <---------WRKY12                                    <---------WRKY38(1)                                    <---------WRKY45            --------->AHL20(2)                                   --------->WRKY18(1) ---------->DOF2             --------->MYB52(1)               ---------->DOF2    <-----------HVH21 --------->ANAC58           --------->ANAC58      <---------ANAC46            <--------ZAP1     --------->ANAC58           --------->ANAC58   ----------->HVH21     <-----------GT1          ---------->DOF2            ---------->DOF2   <-----   tgtgtttgacgagtagccaaaggcatattacaactcggtcaaaggtaatagacaaagcaaagacaaaaaaatccattgcaaaagcaaactgaatacgatc  23234200                          --------->ARR11(3)                          <---------ARR11(3)                         <---------GLK1(1)                    <-------TEIL                   --------->CCA1(2)                  <---------ARR14(2)                  --------->ARR11(3)                                                 <---------ARR11(3)                  <---------ARR11(3)                                                 <-----------ARR10                  --------->ARR14(2)                                                 --------->ARR11(3)                --------->ANAC58       <----------DOF2                               --------->GLK1(2)                --------->ANAC58 --------->ANAC46                                <------ZmHOX2a(1)            --------->ANAC58     --------->ANAC58                               ----------->GT1    <-       --------->MYB59   --------->GLK1(1)     --------->KAN4(2)              <------ZmHOX2a(1)    -- -ZmHOX2a(2)--------->ANAC58     --------->ANAC58            <-------TEIL  --------->CCA1(2)    <----   aaatgaagtttggcacacaagatacagaaatcttcaagaaacttttgtttattcttcgaaagatgcaaactttggagataggaggaaaatctcgactagt  23234300                                            --------->At4g35610               ------>ZmHOX2a(1)                               <----------DOF2                                =======================                   --------->LBD16         ------->TEIL                   --------->ARR11(3)                  --------->LBD16       <---------REM1(1)                 <---------ARR14(2)                  <---------TOE1(2)<---------ANAC58                       --------->ARR14(2)       <- --------YAB1    <---------LBD16   <---------ANAC58                      <---------CCA1(2)         == ------->ICU4    --------->LBD16   --------->TOE2(3)   <---------TOE2(3) <---------GLK1(1)        <-- -----ZAT6  <---------ALFIN1  <---------DAG2<---------At4g35610    <----------DOF2       <---------TOE1(2)   gatgagtatgagtcccatccccggtttcttcgcctttccttgatgcagctcttagtttacgttgttcttctttgtatatcctgtttcttcgttggaacta  23234400            <---------ARR14(2)                                                                    <--            --------->ARR14(2)       -------->P                                              -------- =====HOX2a_HOX2a                 --------->At4g35610           ---------->DOF2           --------->YAB1 -----ZmHOX2a(2)                  <---------At4g35610    ---------->DOF2                 <---------ATHB51 =============================HOX2a_HOX2a             --------->ANAC58                 --------->YAB1 -------ARR11(3)       ------>ZmHOX2a(1)              --------->ANAC58              ----------->RAV1(1)   gatcaaaatacacaaatatgcgctccttatcagttcatctaccataggcttatactaagcaaagaagaaagaaacaatattggagacaacaataataaag  23234500  Previous    Next  AGI:  At3g62780.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G16510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70977.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 23232820    to: 23233970    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62790.1    Description:  NADH-ubiquinone oxidoreductase-related. similar to NADH-ubiquinone oxidoreductase-related [Arabidopsis thaliana] (TAIR:AT2G47690.1); similar to NADH-ubiquinone oxidoreductase-like protein [Camellia sinensis] (GB:ABY77914.1) Range:  from: 23234036    to: 23235283    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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