Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ARR11(3)              <---------ARR14(2)                                                  <---------TOE1(2)              <---------ARR11(3)                                                 ------>ZmHOX2a(1)     <---------ANAC58                                                         <---------YAB1     <---------ANAC58                                                       --------->YAB1 -----------RAV1(1)     --------->At4g35610                         <-----------GT1 ---------REM1(1)       <---------At4g35610                        <---------AHL20(2)         <<<<<<< --------TOE2(3)        <-------GAMYB                  ------>ZmHOX2a(1)   <---------ATHB12 <------MYB83 --YAB1       --------->ARR14(2)         <-----------RAV1(2)       --------->AHL20(2)       <------MYB46(1)   tgatgttgcttctcaagatactattcagttgcagagaaaatgctcaggctcttcgtccttgtaatctatttaactaaatcatcctagttttgtttggttt  23224900                                                       <---------ICU4                                                       --------->YAB1                         -------                                                      --------->ICU4                         --------                                                  <---------YAB1                             --------                                               --------->ARR14(2)               --------->ETT(1)                                               <---------ARR14(2)               <---------DREB2C(2)--                                          --------->CCA1(2)                  <-----------RAV1(1)   <-                                         --------->ARR11(1)           <---------YAB1         <-------                                         <---------ARR14(2)       <---------ANAC58         ----------                                         --------->ARR11(3)       <---------ANAC46    --------->ICU4                                       ----------->ARR10    ------->TEIL <---------YAB1--------->YAB1 <<MYB2      <---------TOE1(2)<---------MYB46(3)--------->CCA1(2) <---------ANAC58    <---------YAB1-   tcatttcatctatcgtatgaaaaaaaactcagtggtttgataagatttggatatgaataatgaaactgtcttgtgatttttgtcggtcatcataagattt  23225000                                                                     <---------------AGL15                                                                    <---------ANAC55(2)                                                                    ----------------->AGL3                                                                    <-----------------AGL3                                                                    <---------ANAC46                                                                    <-----------------AGL1     ------->TEIL                                                   ----------------->AGL2     <---------YAB1                                       <---------YAB1  <---------YAB1                                        <---------ICU4                <---------ANAC46 -->CCA1(2)                                             --------->YAB1                <---------ANAC58 ->ARR11(3)                                            --------->ICU4--------------->AGL15       <--- ->ARR11(1)                                         --------->MYB46(3)                <---------ANAC58 ------->ARR14(2)                                 ------>MYB83      ----------------->AGL1  <------MYB83 --------ARR14(2)                                 ------>MYB46(1)   <-----------------AGL2  <------MYB46(1) --ARR14(2)                                     <---------MYB59     <-----------------AG   --------->MYB59 ->ARR10      ----------->GT1                   ------->GAMYB<---------ANAC46         <---------AtLEC2 -------->CCA1(2)        --------->LBD16    --------->MYB46(3)      ----------------->AG  <--------P   ggatatgaatattgttttgttattttccgaaatttgtttttaaactacaaccgaaccattatgatgtgttacctatattggcaatttggcatgtaggtag  23225100                                                                                  <---------ANAC58                                                                                  <---------ANAC55(1)                                                                                  <---------YAB1                                                                           <---------ANAC55(2)                                                                           <---------ANAC58                                                                           --------->ANAC55(2)                                                                           <---------ANAC46                         --------->ZAT14<---------RVE1(1)                  <---------ANAC58                       --------->ANAC46 <---------CCA1(1)                <---------ANAC46                     <---------ALFIN1  <---------AHL20(1)               ---------->ID1       <-------              <---------ICU4           --------->AHL20(1)              <-----------HVH21    ---------             --------->ICU4            --------->ARR11(3)             <-----------RAV1(1)   <--------            --------->ANAC58           <---------ARR11(3)         <---------AHL20(2)  --------->ALFIN1 ------ZAT6 --------->ANAC58       ---------->DOF2          <---------At4g35610   <---------ANAC58  -   agtcagtacatggcaaggattacacacttcaccaaaaaaaagatatttctatagtcgttttcagatgtttatttgtcgcgtattacgagtggaagataat  23225200                                                   <---------ARR11(3)                                                   <---------AHL20(1)     --------->CCA1(2)                       --------->ANAC58                            --------->ARR14(2)    --------->ARR11(3)                       --------->ANAC46                      <----------ID1    <---------ARR11(3)                       --------->ANAC58                --------->ANAC58 --YAB1                                   <---------ZAT18         <---------AHL20(2)     <---------ARR14(2) >ARR11(3)   <---------ZAT14              <---------ZAT14         --------->AHL20(2)----------->RAV1(1) -ARR11(3)   --------->ZAT14              --------->ZAT14     <----------DOF2--------->ANAC46       - --------->DOF2     ------>ZmHOX2a(1)   --------->ANAC46 ------->TEIL        --------->ANAC58--------   agaaaagatatagactatagtcctcacaattcaccaaaatacacttcactcaatatatgtatttctttttaaatggtccaagaaaacgacagaaccggac  23225300     <---------ICU4     -------->ATHB1     --------->AHL20(2)     <--------HAHB4                                                                               ---     --------->ATHB51                                                                             ---     <---------AHL20(2)                                                                           ---     --------->ATHB12               <------ZmHOX2a(1)                                          <-----    <---------ATHB12               ----------->GT1                         <---------YAB1     ------>NtERF2    <---------ATHB51              ----------->GT1                        <---------ICU4      --------    --------->ICU4               <------ZmHOX2a(1)                      <---------MYB52(1)   <------- ----------->CBF             --------->LBD16                     <---------MYB52(1)          <------- ->LBD16                   <---------LBD16     *TSS        --------->WOX13(1)                <-------   tcttcaattatttgttcatttggactcaaaccggaggaggaaaatcaaaaatgaaacatttcaatctgttatccattattctggttatcgttttggcgac  23225400                                                     <------NtERF2                                                    <---------ZAT2                                               <---------LBD16                                            ------>ZmHOX2a(1)  <-------TEIL                        <-----------ARR10 ------>ANAC58                        <---------ARR14(2) ------>ANAC46                        --------->ARR14(2) ------>ANAC58                   --------->LBD16    ------>NtERF2 -NtERF2                        <---------HSFB2a(2)<---------ARR14(2) ->ETT(2)            --------->ARR14(2)--------->GLK1(1) ---ARF1             <---------ARR14(2)<---------GLK1(1)        <---------At4g35610 --ETT(2)          --------->ANAC46  <------ZmHOX2a(1)  <---------MYB52(1)            <---------ALFIN1 ---ID1        --------->REM1(1)--------->HSFB2a(2)--------->ARR14(2)      <-------TEIL           ---   aagctacattgatgccttcaccagaaacgattttccagaggatttcctcttcggagccggtacttctgcttatcaggttcgagtctgaccacatcaatgg  23225500                                                                                                 <---                                                                                    <---------ATHB12                                                                            --------->ZAT2--------->ANAC58                             <---------ETT(2)                               --------->At4g35610  ----                             --------->ETT(2)                               <---------At4g35610 -----                 <---------AHL20(2)                      <---------LBD16    <---------ZAT2--------->ANAC58 ------>WOX13(1) <---------YAB1                <---------LBD16            <------ZmHOX2a(1)     <----   caatcggggttttccatttttaattgttttgtctacaatttgagttttttgggggaatttgtggaaatagtgggaaggagctgctaatgaagacggaaga  23225600                           <-----------RAV1(1)         --------->HSFB2a(2)     <---------ANAC58   <---------ALFIN1     <---------ANAC46 ------>MYB83                                         <----------DOF2     <---------ANAC58 ------>MYB46(1)                              <---------ICU4  ------>ZmHOX2a(1)   >>>>>>>>>>>>>>>>>LFY                         --------->ATHB12                 - ------GLK1(1)      ------->GAMYB                                 --------->ICU4                   <- ----->GLK1(1)      --------->AtMYB61                    <----------DOF2 ---------->ID1            <- ---->ARR11(3)     --------->MYB46(3)              <-----------GT1<---------YAB1                  --- -----ARR11(3)--------->CCA1(2)               <---------AHL20(2)--------->YAB1                    <--   actcctagcgtctgggatacaacctcccactgttgtaagttgttttgttttattttcaactttgagtcatcattcggcgtttttgtgagaagattgtata  23225700                                                      <---------GLK1(1)                                               ----------->HVH21                                              <-------MYC3                                              ------->MYC3                                           <---------ANAC58 -------->ATHB12                      --------->CCA1(2) --------YAB1                        <---------ARR11(3) -----ZmHOX2a(2)              --------->MYB52(1)  <---------ANAC46 ------>ARR11(3)     --------->MYB52(1)    <---------ANAC58                        <----------DOF2 -------ARR11(3)   --------->ARR11(3)--------->ARR11(3)                   ---------->ID1            -   gatcattgttcaaaaatcgcagataatggaagtaatggagatatagcatgtgatgggtatcacaaatacaaggtttgtctctcttctttgttgaagaagt  23225800  Previous    Next  AGI:  At3g62740.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G27820.1); similar to hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G62750.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G27830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40012.1); contains InterPro domain 6-phospho-beta-galactosidase, eukaryotic; (InterPro:IPR011580); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 23222392    to: 23224864    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g62750.1    Description:  hydrolase, hydrolyzing O-glycosyl compounds. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G27820.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G27830.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT3G62740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40012.1); contains InterPro domain 6-phospho-beta-galactosidase, eukaryotic; (InterPro:IPR011580); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 23225347    to: 23228021    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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