Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <----------DOF2 <---------ARR14(2) --------->ARR11(3) --------->ARR14(2)                                                 <-------TEIL <---------ARR11(3)                                                 --------->SPL7 --------->KAN4(2)                                              --------------->AtSPL3 -------->KAN4(1)               <---------LBD16                 <---------TOE1(2) ---------KAN4(1)             <---------SPL7                    <---------TOE2(2) -------->GLK1(1)            --------->YAB1                     --------->SPL7   --------->YAB1 ---------GLK1(1)           <---------YAB1                      --------------->AtSPL8 -------->HSFB2a(1)     --------->LBD16                       XXXXXXXXXXXXXXXXXXXX>MIR416 ---------HSFB2a(1)    --------->ANAC46                     --------------->AtSPL3           -------- ----------TaMYB80     --------->LBD16                      <---------------AtSPL8      <---------DAG2 -------->TaMYB80     <---------LBD16<---------WOX13(1)     <---------------AtSPL3      <----------DOF2 --------KAN4(2)  <----------DOF2--------->ANAC55(2)  ------>ZmHOX2a(1)         <---------ATHB51   gaatatccgctttgctatgtctttcccggtatcatacggattgctcaaaacacttcctgtaactcgtacgtacaccaattcaattataagctttatcaaa  23211200                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                              <------                                                  --------->MYB52(1)                          -------                                             <---------ALFIN1                                 -------                                           --------->AtMYB61                             <---------ZAT18                                           <---------ALFIN1                         <---------ZAT14                                          --------->ANAC46                          --------->ZAT14                                          --------->ANAC58                   <---------HSFB2a(2) <---                                          --------->ANAC58                   --------->HSFB2a(2)-----                                   <---------REM1(1)                     --------->GLK1(1)    -------     ----------->GT1               <-----------RAV1(1)       ------->TEIL<---------GLK1(1)    -------    --------->DAG2                --------->ARR11(3)   <---------ATHB12 <---------ARR11(3)    -------   ---------->DOF2                <---------ARR11(3)   <------ZmHOX2a(2)--------->ARR11(3)  <-------- ->YAB1                     <-----------GT1----------->RAV1(1) <----------DOF2     ----------->RAV1(1)   aaaaaaaaagttattcaaaaattcgatatataacaagatgttgcaccacacataccgatcatgtactttgtgaagatttctggcacaacagtggccacac  23211300      <---------ANAC58      <---------ANAC58  --------->At5g28300                                                     --------->ANAC46  <---------MYB52(1)                                                   ------->TEIL  --------->DOF5.7(2)                                               --------->ANAC55(2) ----------->GT1                                                    --------->ANAC46 ------>MYB52(1)                                                    <---------ANAC55(2) ----->AtMYB61                                                      --------->ANAC55(1) ----->DEAR3(1)                                               <-----------TGA1 ---ALFIN1                                               <---------MYB52(1) -->ANAC58                                              --------->LBD16--------->ARR14(2) -->ANAC58                                >>>>>>>>>>WRKY38    <-----------HVH21 ------ALFIN1                             >>>>>>>>>>WRKY26   --------->bZIP60(1) ---->MYB46(3)                           ----------->HVH21   --------->ANAC55(2) -->REM1(1)                              --------->WRKY38(1) <---------bZIP60(1) -->ANAC46                <---------ATHB12>>>>>>>>>>WRKY43 <---------DOF5.7(2) -->bZIP60(2)             <------ZmHOX2a(2)           <---------LBD16  <---------ARR14(2)       ----- -ALFIN1              --------->DEAR3(2) --------->WRKY12--------->DOF5.7(2)              <----------DOF2   caccggtaacttgtgagaagttgaaccgatcaatttgacacatttgaccaagtttctccggtaacgtcatacgtatcagcaagtcttctactctttcttc  23211400                                                  <---------ANAC58                                                 <------NtERF2                                                --------->ABI4(2)                                                ------>NtERF2           --------->ZAT6                                            <---------DEAR3(1)     --------->ATERF1(1)              ==========================HOX2a_HOX2a                <------NtERF2              ------>ZmHOX2a(2)         <---------ZAT2            ------>NtERF2             ===========================HOX2a_HOX2a              <---------DEAR3(1)                 -            <-----------ARR10           ----------->RAV1(2)      --------->ATERF1(2)       <---------HSFB2a(2)            <---------ARR14(2)          --------->ZAT2           <---------ATERF1(2)       --------->HSFB2a(2)            <---------ARR11(3)          <---------At4g35610     --------->SPL7             ------>NtERF2            --------->ARR11(3)          --------->At4g35610     --------->ATERF1(1)       --------->DEAR3(1)            --------->ARR14(2)       <---------MYB52(1)       ------->GAMYB             ------>NtERF2           <------ZmHOX2a(1)        <-----------HVH21        --------->MYB46(3)         --------->ABI4(1)      <----------DOF2              ----------->HVH21        --------->RAP2.6(3)        --------->DEAR3(1)      <---------DAG2         ------->TEIL  <---------LBD16 --------->MYB52(1) --------->YAB1       --  <---------MYB52(1)         --------->ARR14(2) <---------MYB46(3)<---------ATERF1(1) --------->MYB46(3) <---------At4g35610         <---------ARR14(2)<---------DEAR3(1)--------->DEAR3(1)  <---------At5g28300 ------>HVH21<------ZmHOX2a(2)   ------>ZmHOX2a(1)<---------ANAC58--------->LBD16  --------->MYB46(3)   gaccgctactttaggatctttgtacttaatgtatcctctgtcagctgcggtggcttctccataacggccggcgaacagtatcacaatcaccgccgagaag  23211500                                 --------->MYB52(1)                                 <---------DOF5.7(2)                            <------NtERF2                           ------>NtERF2                          --------->RAP2.3(2)                          --------->DEAR3(1)                          --------->RRTF1(2)                          --------->RAP2.6(2)                          <---------ATERF1(2)                          --------->ATERF1(2)                          --------->RRTF1(3)                          --------->ANAC46                          --------->RAP2.3(3)                          --------->DREB2C(2)                         --------->ATERF1(1)                         --------->ERF1                         --------->DEAR4(2)                         --------->RAP2.3(1)                         <------NtERF2                         --------->RRTF1(1)                         --------->ORA47(2)                        ------>NtERF2  --------->GLK1(1)                        <---------ATERF1(1)                        --------->DREB2C(1)                       --------->ANAC46<---------GLK1(1)                                       ------                       --------->DEAR3(1)                                                      ======             --------->DEAR3(1)--------->DOF5.7(2)                                           --------            <------NtERF2--------->RAP2.6(1)                                                 <-------           ------>NtERF2--------->At4g35610                                                 ---------         --------->SPL7--------->ATERF1(2)             --------->TOE1(2)             --------->ARR11(3)       ----------->TGA1<---------ATERF1(2)             <---------LBD16               <---------ARR11(3)       ----------->HVH21<---------At4g35610       ------>ZmHOX2a(1)              ---------->DOF2       ------>ZmHOX2a(1)--------->ABI4(1)        --------->TOE1(3)            --------->AHL20(2)<----     ----------->RAV1(2)<---------RAP2.3(1)    ------>ZmHOX2a(1)           --------->ATHB12--------->ICU4     --------->At4g35610<---------DREB2C(1)   <---------ALFIN1            --------->ICU4 --------->YAB1 -------->DAG2        <---------RAP2.6(2)  <---------ALFIN1               <---------YAB1<---------AHL20(2) -------->DOF2   --------->HSFB2a(1)------->GAMYB--------->TOE2(3)   <---------GLK1(2)--------->CCA1(2)   aaaaagctcctgacgccgaacattgccgccgccattaacggagaccctcctccttaaccagggagaattcagaatattgattaaaaagatataatgatct  23211600                                                                     --------->DOF5.7(2)                                                                     <---------MYB52(1)                                                                    <-------GAMYB                                                                    <---------RAP2.6(3)                                                                   ----------->GT1                                                               --------->DAG2       =================================HOX2a_HOX2a        --------->ANAC46                   -------       ------>ZmHOX2a(1)                                   --------->ANAC58           --------->At5g28300 >ZmHOX2a(2)                                               --------->ANAC58          ------->GAMYB  < =============HOX2a_HOX2a                      ---------->ID1 ---------->DOF2        ----------->GT1< ->ARR11(3)                      <------ZmHOX2a(2)     <---------ANAC58   --------->AHL20(2)  <------ --ARR11(3) ----------->GT1     <---------ARR11(3)     <---------ANAC58   <---------AHL20(2) -------- >YAB1 --------->LBD16          --------->ARR11(3)   <-----------GT1--------->At5g28300      -------- ------DOF2*TSS    --------->AHL20(2)      <---------MYB52(1)---------->DOF2      --------->MYB52(1)<   ttctaaatcctgaattgaaaaataaacaagaacagatcatatacagtttgtttttttacttacgaaaggccgttaattaatctccaacggtaaaaatatc  23211700                                                                                      --------->ANAC58               <------MYB46(1)                                                        --------->ANAC46               <------MYB83                                                     <---------ZAT2              <---------DEAR3(1)                                           <---------ANAC58              <---------MYB46(3)                                           <---------ANAC58       --------->YAB1                                                      <---------ANAC46 -->ARR11(3)  --------->ALFIN1              ----------->GT1             <---------MYB52(1) ---------ANAC46  <---------ZAT18          --------->ANAC58            <-------GAMYB  --------->ANAC58 ---------ANAC58  --------->ZAT18        --------->MYB52(1)       --------->LBD16   <---------ALFIN1 ---ARR11(3) <---------MYB52(1)   ------->GAMYB  --------->YAB1 <---------LBD16 --------->At4g35610 ->RVE1(1)   <--------P     <-----------GT1--------->ANAC58 <---------AHL20(2)  <---------At4g35610 ->CCA1(1) <---------MYB46(3)    --------->MYB46(3)        --------->AHL20(2) --------->ZAT18 ---------ANAC58<------NtERF2  ----------->RAV1(1)         <---------AHL20(2) <---------ZAT18   tagcgtctataatcggttggcgcactaaatttacaacagacaaaaacggaaacataactaatttaatccggacagttgtgtgagctccaagccagtcgtt  23211800                          --------->MYB52(1)               <---------RAP2.6(3)                      <---------------AGL15                <---------DDF1                      --------------->AGL15                ------>NtERF2                     <-----------------AGL2                ----------->RAV1(1)               ------>MYB46(1)                  <---------DAG2                <---------MYB52(1) --------->ATHB12          ------>MYB83                  <----------DOF2              --------->LBD16    <---------AHL20(2)       ------->GAMYB             -------->P   <---------DOF5.7(2) --------->ANAC46    <---------YAB1           <---------MYB59             <---------At5g28300              --------->ANAC55(2)--------->AHL20(2)        --------->AtMYB61            <-----------GT1            <---------ICU4     --------->DREB2C(2)             --------->MYB46(3)          <---------MYB52(2) ------->GAMYB<-----------GT1 --------->RAP2.6(2)            -------->P     <-----------GT1 <-----------------AGL1  <---------LBD16     <---------AHL20(2)     --------->WOX13(1)   ttctgtttaacaacttaccgctttctgttaacggaaaacaaaaattacccgtgatttaggccgacattttaattgggcttagattgttatcaaccaaaca  23211900                                                                              --------->ABI4(1)                                                                              <------NtERF2                                                                              <---------SPL7                                                                              ------>NtERF2                                                                             --------->DEAR3(1)                                                                             --------->RAP2.6(2)                                                                             --------->RAP2.3(2)                                                                             --------->RRTF1(2)                                                                            --------->RAP2.3(1)                                                                            --------->ATERF1(1)                                                                           ------>NtERF2                                                                           <---------ATERF1(1)                                                                           --------->LBD16                                                                          --------->ANAC46                                                                         --------->MYB46(3)                                                                         ------>ZmHOX2a(2)                                                                       <---------ARR14(2)                                                                 <---------ZAT14                                                                 --------->ZAT14                                                                 <---------REM1(2)                                                               --------->ANAC46                                                             --------->ZAT6--------->At4g35610                         <---------AHL20(2)         <---------ZAT6     --------->ARR14(2) <----------            <---------YAB1 <---------CCA1(2)  --------->ZAT6 <-----------GT1--------->ANAC46       <-        <---------GLK1(2)--------->AHL20(2)<-----------GT1 <-----------GT1--------->DEAR3(1)   <-----   aatgggcttagattattaaggcccaatttatatctgaagagtgttttaccactagtgtttttttcactacactgatccgccgcaccaagttttaacgcgt  23212000                                                                 <---------AHL20(2)                                                                 --------->AHL20(1)                                                                 --------->AHL20(2)                                                                 <---------AHL20(1)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                                --------->AHL20(2)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                         <---------AHL20(2)                                                        <---------AHL20(2)                                                        --------->AHL20(2)                                                    <---------AHL20(2)                                                    <---------YAB1                                                   <---------AHL20(2)                            <---                                                <---------ARR11(3)                              <---- -GT1        --------->ANAC58                   --------->ARR11(3)           <---------ANAC58 <------ --------HSFB2a(2)        ----------->HVH21     --------->AHL20(1)           <---------ANAC58 ------- ------HVH21 --------->ANAC58                   <---------AHL20(1)<---------AHL20(2)         *TSS----   cccagacagacaggcaggcatgttctgtctgacatttccaaaaattcaaatatttttattaaataaatatattttgtttacttgtttaatccaaatttaa  23212100  Previous    Next  AGI:  At3g62710.1    Description:  glycosyl hydrolase family 3 protein. similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G20950.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G20950.2); similar to exoglucanase precursor [Zea mays] (GB:AAF79936.1); similar to unknown [Populus trichocarpa] (GB:ABK95015.1); similar to beta-D-glucosidase [Tropaeolum majus] (GB:CAA07070.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) Range:  from: 23208634    to: 23211611    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62720.1    Description:  ATXT1; UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups. Identical to Xyloglucan 6-xylosyltransferase (XT1) [Arabidopsis Thaliana] (GB:Q9LZJ3); similar to ATXT2, UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G02500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70988.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59912.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77730.1); contains InterPro domain Galactosyl transferase; (InterPro:IPR008630) Range:  from: 23212093    to: 23213883    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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