Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              <------                                                                                          ------>ZmHOX2a(2)                                                                                          ===========                                                                                         --------->HSFB2a(1)                                                                                         <---------HSFB2a(1)                                                                                         ============    ---------->ID1                                                                       <------ZmHOX2a(2) ----->ZmHOX2a(1)                                                                       --------->ARR11(3) --->bZIP60(2)                --------->MYB52(1)                                        --------->ARR14(3) ----TGA1a                --------->ANAC58                                              <-----------ARR10 --->TGA1a                --------->ANAC58                        <-----------GT1       <---------ARR11(3) --->ANAC46               --------->AtLEC2              --------->ATHB12                <---------ARR14(2) --->O2                   --------->ANAC46             <-------TEIL                --------->CCA1(2) --->ANAC58             ---------->DOF2             --------->GLK1(1)------->GAMYB<---------ARR14(2) --->ANAC58          <---------ETT(1)       ---------->DOF2       --------->MYB52(1)    --------->ARR14(2) --->ANAC55(2)   <---------GLK1(1)         ------>ZmHOX2a(1)   <----------DOF2    --------->ARR14(2)   tccttcgtcgtcttcttcgaattccgacaagcaaacagagcattcctcaagcggagattcatgggttttaacggagtagacgaagatagggatcttctcg  23197300                                                          <---------ANAC46                                                         <------NtERF2                              <                                                        <---------RAP2.3(1)                         <                                                        <---------ATERF1(1)              <------NtERF2                                                        ------>NtERF2                    --------->RAP2.3(1)                                                        <---------DEAR4(2)               --------->ATERF1(1)                                                       <---------RAP2.3(2)              <---------ORA47(2)                                                       --------->ATERF1(2)              <---------RAP2.3(1)                                                       <---------ANAC46                 ------>NtERF2                                           <---------ANAC58       ------>ZmHOX2a(2)     <---------DEAR4(2)                                           <---------PCF2--------->ATERF1(1)            <---------ATERF1(1)                                           <---------ANAC58    --------->ATHB12         <---------ERF1                                          <------NtERF2--------->DEAR3(1)              <---------RAP2.3(2)                                        --------->ALFIN1<---------ERF1                 <---------DEAR3(1)                                      <---------ANAC46 <---------DEAR3(1)              --------->DEAR3(1)                                      <---------ANAC58<------NtERF2  <---------DEAR3(1)<---------ANAC46         <------ZmHOX2a(2)            <---------ANAC58--------->ATERF1(1)              <---------RRTF1(3)         =========================HOX2a_HOX2a         --------->RAP2.3(1)              <---------RAP2.3(3)         ==============HOX2a_HOX2a   <---------MYB46(3)<---------ATERF1(2)            <---------ABI4(1)      <---------DEAR3(2)        --------->ICU4        <---------ABI4(1)               --------->ATERF1(1)   <-----------HVH21            <---------YAB1       <---------RAP2.3(1)             <---------RAP2.3(1)  --------->DEAR3(1)          --------->YAB1         <---------RRTF1(1)            --------->SPL7  <- -->HSFB2a(2)              <------ZmHOX2a(1)        <---------DEAR3(1)         ----------->HVH21----- ---HSFB2a(2)   <------ZmHOX2a(1)--------->ATHB12   <---------RAP2.3(2)    <---------ZAT14   -------- ======================HOX2a_HOX2a   --------->MYB55(2)<---------RAP2.3(3) --------->ZAT14   <------- ======================HOX2a_HOX2a <---------WOX13(1)<---------ATERF1(1)   --------->ZAT18<---------ANAC46   agcaccgtcggatcaagaggagagagggaggatgatgattgggtggggtctctagcggcggcgagtgatcggaggtgagcactgatacggcggcgaatac  23197400          <---------LBD16          <------NtERF2         <---------RAP2.3(1)         <---------ERF1         <---------RRTF1(1)         ------>NtERF2                                        <------NtERF2        <---------RRTF1(2)                                  --------->DEAR3(1)        <---------DEAR3(1)                                  <---------DEAR3(1)        <---------RRTF1(3)                                 --------->RAP2.3(1)        <---------RAP2.6(2)                                --------->ATERF1(1)        <---------RAP2.3(2)                                <------NtERF2        <---------ATERF1(2)                               <---------RAP2.3(1)        <---------RAP2.3(3)                               <---------ATERF1(1)        --------->ATERF1(2)    <---------ZAT2             ------>NtERF2     ----------->HVH21         --------->ZAT2            <---------RAP2.3(3)  --------->ARR14(2)           --------->At4g35610       <---------DEAR3(1)  <---------ARR14(2)           <---------At4g35610       <---------ANAC46                 <---------YAB1 <-------GAMYB             <---------ANAC46             --------->RAP2.6(3)           --------->ANAC58 ---------MYB46(3)  ------->GAMYB                      --------->MYB52(1)             --------->ANAC58 ---------DEAR3(2) --------->MYB46(3)                 ----------->HVH21           --------->ANAC58  < --------DEAR3(1)<-----------GT1                  --------->AHL20(2)              --------->ANAC58 <- ---->ANAC46   <---------KAN4(2)                  <---------AHL20(2)          <---------ANAC55(2) --- ->ARR14(2)  <------NtERF2 <---------ANAC58   <------ZmHOX2a(1)       <------ZmHOX2a(1) --------->YAB1 --ARR14(2) --------->LBD16<---------ANAC58   ----------->GT1------>NtERF2 ----------->TGA1     <----   ggcggttttgacggcggaataaccatctagcgtagctgtggaaacagaggattaaaatgacggcgacgaagaggatgatgacggaagcaagcatgatttt  23197500             <---------bZIP60(1)             --------->bZIP60(1)             --------->ANAC55(2)             --------->O2             <---------O2             <---------TGA1a             <---------ANAC55(2)             =========================================bZIP_DOF             <---------ANAC55(1)             --------->TGA1a             <---------ANAC58             <---------ANAC46             <---------ANAC58  --------->REM1(2)  <------ZmHOX2a(2)                   <-----------HVH21 <---------MYB52(1) <---------ARR14(2)      --------->DAG2 ---------RAP2.6(3) --------->ARR14(2) --------->LBD16  <---------ZAT6 --------ANAC46----------->HVH21      --------------->AGL15        <---------GLK1(1) ------->ID1 <---------bZIP60(2)   <-----------GT1 XXXXXXXXXXXXXXXXXXXX>MIR780.1                ----- -------GT1------------->DYT1<-------TEIL  ---------->DOF2         --------->GLK1(1)           ------   gccgtttagagagtaacgtgacgatccatggttcatgtttccccataaagtcttgctactgtcaaacaggtttcccattgttttgaagatagatagagaa  23197600                                                                                        <---------YAB1                              <------MYB83                                   *TSS   <---------ANAC46                              <------MYB46(1)                            --------->HSFC1(2)  <---------TOE2(3)           ----------->GT1        --------->MYB52(1)  <---------HSFB2a(1)  <---------TOE1(3)          --------->MYB55(2)  --------->ANAC58        <---------HSFC1(2)   <------ ---->DAG2                   <---------MYB46(3)  --------->ANAC58        --------->HSFB2a(1)  <------ ---->DOF2                  --------->ALFIN1 >>>>>>>>>TBF1         --------->ALFIN1 ----------->GT1   agtgaaggttttagagagagaatgaagtgagtgggtgaaacgatgaagaagaagcaaacgagagagagagtgggaagtttctaatgtggtataattctgt  23197700                                                  <----------DOF2                                   -                                            <---------ANAC58                                       --                                            <---------ANAC58     <-----------GT1                 <---                                       <------------CBF      --------->AHL20(2)                 <----                                      <---------ICU4         <---------AHL20(2)                 <----                                      --------->ATHB51      <---------AHL20(2)                 ------                <---------AHL20(2)    --------->ATHB12  <---------AHL20(1)                    <------     ------->TEIL                     -------->ATHB1    --------->AHL20(2)             <---------YAB1 -----RAV1(1) <-----------TBP        --------->ICU4     <---------AHL20(2)<----------DOF2 <---------YAB1 ---ANAC46<----------DOF2            <---------ATHB51<------------------------ANAC81   <---------AHL20(2)   gggtttgaatctctttatttatagacaaatactatatgaattattggcttctctttattttatttattttcatcttctttctatttgtttttattgttga  23197800                                                                   <---------AHL20(1)                                                                   --------->AHL20(1)     --------->TOE2(3)                                             <---------ICU4   <---------TOE1(3)                                               <---------ARR11(3)   <---------TOE2(3)                   <----------ID1              --------->ARR11(3)  <---------DOF5.7(2)                  ----------->GT1           <---------AHL20(1) -------->DOF5.7(2)            <---------STY1(2)              --------->AHL20(1) --------------------->TaNAC69(2)     ----------->GT1---------->DOF2      ---------->DOF2 ------WOX13(1)             <---------ANAC58      --------->YAB1 <---------AHL20(2) -----ANAC58          --------->AHL20(1)         <---------YAB1 --------->YAB1 -----ANAC58          --------->ARR11(3)       <---------ICU4 <---------AHL20(1)        <----------DOF2 --->ATHB12           <---------AHL20(1)   --------->ICU4--------->AHL20(2)        ---------->DOF2<-- ---YAB1  <-----------GT1   <---------ANAC58   --------->YAB1 --------->AHL20(2) <---------YAB1  <---   ttgttaacgtttatacgagttttatatattgctagctaagagggaaaaattatcacaaagaaaatataatattttcaaaagtgattaaagcttttgcgac  23197900                                                                <----------DOF2                                                          --------->ZAT14                                                      <---------ICU4     <------------------------ANAC81                  <---------------AtSPL8                        < --------DOF2          <---------ANAC46               --------------->AtSPL8                    <---- ------DAG2 ---------->ID1    <---------YAB1         --------->ICU4                             <----   ctttttttttttttgtttttttgttttgtgttttcatagaacatatattcgtctaataagtactctcttttttgtttttgtcaaatgtctaatagctact  23198000                                              <---------ANAC46              <---------WRKY18(1)                                              <---------ANAC58             --------->WRKY38(1)                                              <---------ANAC58       --------->ANAC58                                            --------->ARR11(3)       --------->ANAC58                                           --------->RVE1(1)      --------->LBD16        <----------DOF2                  ------>MYB83          <---------AHL20(2)       --------->ANAC46        <---------DAG2         <----------DOF2                <---------ICU4          <---------LBD16       <-----------GT1 ---------YAB1    ------>MYB46(1)      <---------ATHB12     <----------DOF2----------->HVH21 ------DOF2      <---------ALFIN1      --------->AHL20(2)   <---------DAG2 --------->WRKY12 -----DAG2   <-----------GT1        <---------YAB1         <---------YAB1  --------->WRKY45         <   ttatacttgagctttaaacccacttgtagatgtgagttctaataaatatcgtggagacattacttttgcgcaagtctttgaccgtagtttactttattag  23198100                     <----------DOF2                  ------->TEIL                  --------->GLK1(2)                  <---------ARR14(2)                  --------->ARR14(2)                  <---------ARR11(1)                 <---------ARR14(1)                           --------->ANAC58    <---------ARR11(3)                                        --------->ANAC46    --------->ARR11(3)     <---------AHL20(2)                 --------->ANAC58 <-----------GT1 <---------CCA1(2)                    <---------AHL20(2) -----------GT1  <---------GLK1(2)                 <---------GLK1(2)      <---------ANAC46   ttttaacatcttgctcaccgaatctttatttttttgctaatatttgttcaaccgattttttttcaaggcatatcagacgtataaaaaatactgccaattt  23198200  Previous    Next  AGI:  At3g62690.1    Description:  ATL5 (Arabidopsis T?xicos en Levadura 5); protein binding / zinc ion binding. Identical to RING-H2 finger protein ATL3L (ATL3L) [Arabidopsis Thaliana] (GB:Q9LZJ6;GB:Q9XF64); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G47560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40041.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23196324    to: 23197677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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