Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ANAC58                                                                                       ---------->DOF2                                           <---------GLK1(1)                  --------------->AGL15                                      ------->MYC3                            <---------------AGL15   --------->ARR11(3)                 <-------MYC3                         <---------YAB1--------->ANAC58   <---------ARR11(3)          <---------LBD16                            --------->KAN4(2)  --------->YAB1            <---------GLK1(1)       <---------ATHB12 <---------YAB1  --------->ANAC58 <---------ATHB12         --------->YAB1   --------->GLK1(1)     ------>ZmHOX2a(2)   --------->ANAC58   ccaatgatattgagagcgtcgagtccattgatatcgggcatatggaaatcccaaatcactagatcgatctcatgcttattcttcatcaagaaagccatgg  23188900                                                               <---------TOE2(3)                                                             --------->AHL20(2)                     -                                                             <---------AHL20(2)                    --                     <---------MYB52(1)                     --------->ICU4                         --                   <---------ANAC58                    --------->RAP2.6(2)                         <-                   <---------ANAC58       --------->YAB1    <---------ATHB12                       <-                 <-----------GT1--------->ANAC46       --------->ANAC58                          ----            --------->YAB1      --------->ANAC55(1)    --------->ANAC58                      --------       --------->At4g35610      --------->ANAC58--------->TOE2(3)                           ---------       <---------At4g35610      --------->ANAC58--------->TOE1(3)               --------->MYB52(1)<--   cctcttctccgctctcatatttcgttactgaaacacgaaattaagcataaccatagaccgcaattaatgtaaacccctcaattaccgaaaaaaaaaaagt  23189000             ------->GAMYB            --------->MYB46(3)            <---------MYB55(2)            <---------MYB52(2)  ---------->DOF2--------->TOE1(3) -------->TOE2(3)--------->TOE2(3) ------->ANAC55(2) --------->GT1 -------->P --------ANAC55(2) --------ANAC46------>MYB83                                                       <------ZmHOX2a(1) ----->MYB52(1)------>MYB46(1)     --------->YAB1               -------->P--------------->AGL15 ->DAG2--------->TOE1(3)    ---------->DOF2                     ------->TEIL --------->ATHB12       - ->DOF2--------->TOE2(3) <-----------HVH21          <---------MYB52(2)    --------->TOE2(3)<--------- ---------------------TaNAC69(2)  <-----------------------TaNAC69(2)     <-----------------AGL1    <-   aacgtaaaaccctaaccaaccttaattcgtcaaagaaacataaaaaaaaaaaaaactaactcaatctacctagataccttgataggaatactgtgtcatg  23189100                                  ---------->DOF2                                --------->AtMYB61                              ------>MYB83                              ------>MYB46(1)                             --------->ORA47(1)                            --------->DEAR3(1)                            --------->DREB2C(2)                            --------->DEAR4(1)                            <---------MYB55(2)                            <---------MYB111(1)                            --------->MYB46(3)                            <---------MYB46(2)                           --------->DEAR3(2)                                          --------->GLK1(1)                           --------->ORA47(2)                                          <---------At4g35610                        --------->ZAT14                                      <-------GAMYB                        <---------ZAT14                                     <---------MYB46(3)                    --------->ARR14(2)                                     <------NtERF2      ---------->DOF2--------->At4g35610                                 <---------DEAR3(1)         - -------->GLK1(2)   <---------ARR14(2)                      <---------ARR11(3)  --------->ATHB12    < --HVH21            --------->GLK1(2)            <---------DAG2         <------NtERF2  --------->At4g35610 --------GLK1(2)   <---------GLK1(2)             <----------DOF2      <---------DEAR3(1)  <-------TEIL   agattcttcaaagacgaattggaatctgcaccgaccaaaagaaccctattacttttagtcaagaactcttcgtcgtcgtcgttgatgggagatgcaattc  23189200                                                                                               <-----                                                                               <-----------ARR10                                                                               --------->ARR11(3)                                                                               --------->GLK1(2)         <---------ARR11(3)  <---------ANAC46                                  <---------ARR11(3) ---       --------->ANAC58      <---------ANAC58                             ----------->GT1      <-----       --------->ANAC58      <---------ANAC58                            --------->CCA1(2)    ------- -------->YAB1 <---------ANAC58                <---------KAN4(2)     <---------TOE2(3)      ------->TEIL ---------ICU4 <---------ANAC58       <---------YAB1                ---------->DOF2      <---------YAB1   catcatcacaaggtatttcgtttcgcaagttgcgagagttctcatcgagtatgttcgaaaaaactgacattaaagatagaaaatctaatctatgaatgct  23189300                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ====                                                                                                 <---                                                                                                 <---         ---------->DOF2                                                                         ----      --------->ANAC58                                                                           <---      --------->ANAC58                                                                           <---  --------->ANAC58                                                                               <---  --------->ANAC58                                                                              ----- ----ANAC58                                                    --------->TOE1(2)              <------ZmHOX2a(2) ------->DOF2                                                 <---------ANAC58               <------- ----ANAC58               <------------CBF                    <---------ANAC58        ----------->TBP -->ATHB12           <------------CBF                     <---------YAB1            <-----------TBP   tgaagcgcaaggaaagagatagagattgaattgaagaaggaagagagaatagaggggtttatgagcgtgcgaaaaactaggtatgcatatatatggatca  23189400     --------->DAG2    ---------->DOF2 -----MYC3 ------>TOE1(2) ---->MYC4 ---->MYC3 ---->PIF4 -----PIF4 -----MYC4 -----MYC2 -----PIF5 ---->MYC2                                     <------MYB83 ---->PIF5                                     <------MYB46(1) ------O2                                      <---------ANAC46 ----->O2                                     --------->MYB46(2) ----->TGA1a                                  --------->MYB59 ==============bZIP_DOF                      <---------MYB55(1)       <-----------TBP ------ANAC58                               <---------MYB52(1)        --------->AHL20(2) ------ANAC58                         --------->AHL20(2)             <---------AHL20(1)            -- ----->ANAC55(2)                      <---------AHL20(2)             --------->AHL20(1)   <---------AHL20(2) ------ANAC55(2)                  <---------YAB1                <---------AHL20(2)   --------->AHL20(2) ------ANAC46                   <---------ZAT6--------->MYB111(1)   --------->AHL20(2)  <---------AHL20(2) ------TGA1a             <-----------TBP<------------CBF        --------->AHL20(2)   <---------ARR11(3) ------->OsbHLH66    ----------->GT1 <---------YAB1     <----------DOF2              --------->AHL20(1) ----HVH21    <------------CBF  ----------->GT1<---------ANAC55(2)--------->AHL20(2)<---------CCA1(2)   cgtgcgaaaagttgaatattggaaagtatatatactgttattaattgttaggtatagactttttaaaaaaatatatatagttatccatatattattttga  23189500                                                                                                <----                                                                                          --------->ANAC55(2)                                                                                          <---------ANAC55(1)                                                                                          <---------ANAC55(2)                                                                                          <---------ANAC46                                                                   <---------ANAC58       <---------ANAC58                                    ----------->GT1                <---------ANAC58       <---------ANAC58                        <------ZmHOX2a(1)                         <------NtERF2        <---------MYB52(1)                       ----------->GT1                      <---------YAB1       <---------At4g35610           --------->AHL20(2)     ---------->DOF2   ---------->DOF2<---------ANAC46 xxxxxxxxxxxxxxxxx      ----------->GT1 <---------TOE1(3)        <----------ID1<-----------RAV1(1) --------->At4g35610 ------->AHL20(2)     <---------TOE2(3)    ---------->DOF2 <------------CBF  <----------DOF2   <-----   attaaaaatcgaaaaaaatgagttaaggaaaataacaaaagaaaaaaaagaaacaaaagagtattgttggcgtttctctctttagctccgtttcgtgttt  23189600                                                                      <---------GLK1(2)                                                                     <---------At4g35610                                                                     --------->At4g35610                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                           <---------TOE2(3) --------->bZIP60(1)                                      ----------->GT1 ------>ZmHOX2a(1) --------->At4g35610 -------GT1                 ------>ZmHOX2a(1)       <-----------------AGL1   <---------bZIP60(1) xxxxx>smallRNA(si3)        <---------YAB1   ----------->GT1 <------ZmHOX2a(1)          --------->ZAT18 ----ZAT14       ------->TEIL     <---------YAB1    ----------------->AGL1----------->HVH21      <---   actgtttgactaaaacatgaaacttgagtcctcattgttattgtgaaatgtaattcctgttgaggaacttcagcttctgacatcaatttgtgcccagttt  23189700                                                                                   <---------TOE1(3)                                                                                   <---------TOE2(3)                                                              ----------->GT1      <---------YAB1     --------->ATHB12               --------->GLK1(2)    <---------YAB1         <---------MYB52(1) <-    <---------YAB1            --------->AtLEC2         --------------->AGL15<-----------------AGL1<<< --------GT1            --------->GLK1(1)        --------->MYB52(1)     --------->YAB1        -------   ttcgacatcatagggaaatgagagagagttccatgaagaaactggctgaaataagggctatgaatggtaaacaatggtatcagttatggtagtaactata  23189800  Previous    Next  AGI:  At3g62670.1    Description:  ARR20 (ARABIDOPSIS RESPONSE REGULATOR 20); transcription factor/ two-component response regulator. Identical to Putative two-component response regulator ARR20 (ARR20) [Arabidopsis Thaliana] (GB:Q9LZJ8); similar to ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G16857.1); similar to ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G16857.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40068.1); contains InterPro domain Response regulator, plant B-type (InterPro:IPR017053 Range:  from: 23187532    to: 23189270    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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