Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                            <--------                                                                                        --------->YAB1                                                                                       <---------YAB1                                                                                      <---------TOE2(3)                                                                                     --------->YAB1                                                                                 -------->ATHB1                                                                                 --------->ATHB12               --------->AHL20(2)                                                --------->ATHB51              --------->AHL20(2)                                                <---------AHL20(2)          --------->AHL20(2)                                                    --------->ICU4-------      ----------->GT1                                     ---------->DOF2       <---------ATHB51 <--- -------->DOF2<---------AHL20(2)        <---------ANAC55(2)                     --------->AHL20(2)   ataaaacgcagaaaaaataaataatacaaaattgtttacatcatgtaaatgcagaaaatgtaaagctctctagtacaaacaaattattgatgataatgtt  23170400                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                              --------->AHL20(1)    ------>ZmHOX2a(1)                                                    --------->AHL20(2)   <---------YAB1                                                     <---------ICU4 --->GT1<---------MYB46(3)                     --------->DOF5.7(2)    --------->YAB1 -TOE2(3)                                      --------->At5g28300   --------->ICU4 -->TOE2(3)                                --------->MYB52(1)      --------->YAB1           --------- ------AHL20(2)                   ---------->DOF2             --------->ANAC46<---------AHL20(1)   <-   aaattcctattggttaactcatgagttagattaatagaaagttagaaacggtaactgtatatatacccaaaataatgaaatatatcaatagaagcagtaa  23170500                                              <---------AHL20(2)                                            <---------AHL20(2)                                          <---------AHL20(2)                                         <---------AHL20(1)                                        <---------AHL20(2)                                      <---------AHL20(2)           --------->AHL20(2)    --------->YAB1                                      --------->AHL20(2)           <---------AHL20(2)   <---------YAB1                                    --------->AHL20(2)       --------->YAB1     <---------------AtSPL8                                   --------->AHL20(1)   <------NtERF2           --------------->AtSPL8                                --------->AHL20(2)    --------->ETT(1)       <---------AHL20(2)      <---------RAP2.6(2) ----------->GT1--------->AHL20(1)  ----------->GT1 --------->AHL20(2) -->GT1 --------->At4g35610     <---------AHL20(2) <-----------RAV1(1)       --------->AHL20(1)     - --------YAB1      ---------->DOF2 <---------AHL20(1)--------->RAP2.6(3)     <---------AHL20(1)------   tacgattagcggctaacaaaaaaaagaatggtattaatatatatatattttttttgtcggcaatggtattaaaatggaatttattgtactatcattttaa  23170600                       -------->P                       --------->MYB52(1)                       ------>MYB83                       ------>MYB46(1)                    --------->MYB46(3)       <---------ICU4--------->AtMYB61  ----------------->AGL2                                <---------ZAT18  ----------------->AGL3                                --------->ZAT18        <---------------AtSPL8  <-----------------AGL1                                <---------ZAT14   ------------>CBF --------->HSFC1(2) -------->ZAT18   <-----------GT1              <---------DEAR3(2)        <-----------GT1   <---------HSFC1(2) ---->DOF2  <---------ANAC46                  --------->ETT(1) <---------AHL20(2)  --------->SPL7   agggcccaaaaatggcctataaaccaaccagacaattgcacacatttgtcggtaagagagcacaataaatcgttttaacaatgggtacgaagaagcctct  23170700                                             ------>NtERF2                                            --------->DEAR3(1)                                            <---------DEAR3(1)                                            <---------ANAC46                                    <---------ICU4                                   <---------ATHB12             --------->AGP1        ------------>CBF    --------->YAB1                               <      --------->AHL20(2)      --------->ANAC58      --------->YAB1                                  -      ---------->DOF2         --------->ANAC58 <---------ANAC46               ------>MYB83          <     <---------ATHB12         --------->ANAC46<------NtERF2                   ------>MYB46(1)<------- ------------>CBF       --------->CCA1(2)--------->ANAC46  *TSS      <-----------HVH21   ------>ZmHOX2a(1)   aggcccaataaaacagacctagtaagataaacaggccatcaatacggcgtcgtttgataatattcaatcggcgttagaccaacttcttctcctctctttc  23170800                                   --------->ZAT14                                   --------->ZAT18                                   <---------ZAT14                                   <---------SPL7                                 <---------------AtSPL3                                 <---------------AtSPL8                             <------NtERF2                             --------->At5g28300                            <---------MYB46(3)                            <---------DEAR3(2)                           <---------ANAC46                           <---------DEAR3(1)                          <---------ABI4(1)                          ------>NtERF2                          <------NtERF2      <------NtERF2       --------->ATERF1(1)                                                     ---    <---------DEAR3(1)   <---------RRTF1(1)                                                   <------   <------NtERF2         <---------RAP2.3(1)                                               --------->ARR14(2)  ------>NtERF2         <---------RAP2.3(2)                                                <---------ARR14(2)  --------->LBD16       <---------RAP2.6(2)                                            <---------At4g35610 <---------LBD16        <---------RRTF1(3)                                 --------->At4g35610------- --------->ANAC46       <---------RRTF1(2)                                 <---------ZAT2 <---------RAP2.6(3) ---------HSFB2a(2)     <---------RAP2.3(3)                                <---------At4g35610<------ -------->HSFB2a(2)     <---------DEAR3(1)                      --------->AtLEC2    ---------->DOF2 ---------LBD16        <---------LBD16    <---------GLK1(2)   <---------ANAC46  <---------At4g35610 ---DOF2          <---------YAB1<---------ANAC46              <---------AtLEC2  --------->At4g35610 -   ttcccggcggagcgactacgatgtttgcggcggtgagtgtacgagcttctctcaaaactttgttccatggaagacacagctcatcttacagccgatattg  23170900                                                                <---------HSFB2a(2)                                                                --------->HSFB2a(2)               <---------ANAC58                                <---------LBD16               <---------ANAC58                     <---------RVE1(1)               <---------ANAC46                     <---------CCA1(1)             <---------AHL20(2)       <---------HSFB2a(2)    --------->GLK1(2)        <---------MYB52(1)            --------->HSFB2a(2)    --------->ARR14(2)       --------->TOE2(3)          <----------DOF2  <---------ARR11(3) <---------MYB52(1)             <---------------AGL15        --------->ARR11(3) ---->TEIL   --------->ARR11(3) <----------DOF2    --------->ARR11(3) ---------AtSPL3           <---------ANAC58<---------GLK1(2)--------->RVE1(1)<---------DAG2        -- -------->AtSPL8           <---------ANAC58<---------ARR11(3)<---------ARR11(3)                    -- ---------AtSPL8          <---------ICU4   --------->ARR11(3)<---------ARR14(2) ---------->ID1     <- -------->TOE2(3)      --------->WOX13(1) <---------RVE1(1) <---------GLK1(1)<----------DOF2  <------   tacgttattcgttaatttcttgtatcaatccttgctctttcgagagattttcagatatttgaatatctggaaaatgacacttttcgcaatggctaattcg  23171000                                                                                                 ----                                                                                                <----                                                                                               <-----       <---------At4g35610                                                                     <-----       ----------->GT1                                                                         <-----       --------->At4g35610                                    <---------ANAC58              <--------P     <-----------RAV1(2)                           <---------AtMYB61      <----------DOF2  <---------ANAC58 ------->HSFC1(2)                            --------->CCA1(2)<---------ANAC55(2)          <-------GAMYB ------->HSFB2a(1)                    <-----------GT1         <---------ANAC58             <---------ANAC58 --------HSFC1(2)              <---------ANAC58<------MYB83   <---------ANAC46<-----------TGA1 <----- ---LBD16                      <---------ANAC58<------MYB46(1)--------->ANAC55(2)         <---------MYB46(3)   gagtttctcaggtgaaattgcagcgatttcgaagcgtatttcacaagataggtgaggtttgatttcgtatttctcactttcgtcagtgtttttggttgct  23171100                       <---------RVE1(1)                       --------->RVE1(1)                       <---------CCA1(1)                       --------->CCA1(1)                       --------->GLK1(1)          <---------MYB52(1)        <---------ANAC46        --------->TOE1(3)        <---------ANAC58<---------ARR11(3)        <---------ANAC58--------->ARR11(3)                               <-------TEIL ------->HVH21         <---------GLK1(1)                               <---------ARR14(2)     <------ -----WOX13(1)        --------->ARR11(3)                            <--------P             --------->GLK1(2) ----ANAC58           <---------ARR11(3)                          <------MYB46(1)         <---------GLK1(2) ----ANAC46          <<<<<<<<<RAP2.2                              <------MYB83            --------->ARR14(2) ----AtLEC2  <---------TOE2(3) <---------At4g35610                <---------MYB46(3)      <---------ARR14(2) ----ANAC58  <---------TOE1(3)<---------TOE1(3)                 <--------P          <---------GLK1(1)   tgacatggtttcgttagggttttagatatcttaagcttagaaacaattgcatttgagtttcttcttgttggtagattcagtgatggaaatcggattctga  23171200                                                                                                -----                                                                                                -----                                                  --------->GLK1(1)                            <-----                                                  <---------GLK1(1)                          <-------                                                 <---------ARR14(2)                         <------MYB46(1)                                                 --------->ARR14(2)                         <------MYB83             <---------HSFB2a(2)               --------->LBD16                    <---------ARR14(2)             --------->HSFB2a(2)              <---------ANAC46                    --------->GLK1(2) <---------ANAC58                            <---------LBD16                      --------->ARR14(2) <---------ANAC58                         --------->At4g35610        <---------ZAT14       --------->MYB59 <---------ANAC46     <---------ANAC46    <---------At4g35610        --------->ZAT14    <---------REM1(1) ---YAB1    <---------LBD16<------ZmHOX2a(1)------->GAMYB      <---------ALFIN1  <---------GLK1(2)   atagcttgaaattatctggaaatggagtaggaatcaaactgttcaactgcggatttcatagttctccacagtgttgtacatcagaatctgatgtaggtac  23171300  Previous    Next  AGI:  At3g62620.1    Description:  sucrose-phosphatase-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN74685.1); contains domain RNA-binding domain, RBD (SSF54928) Range:  from: 23170759    to: 23172830    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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