Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------At4g35610             ----------->RAV1(2)             --------->O2             <---------ZAT2            ------>NtERF2           --------->DEAR3(1)           <---------ALFIN1         --------->ABI4(1)         <---------ATERF1(1)         ------>NtERF2         <-----------HVH21        --------->ANAC58        --------->DEAR3(1)        --------->DREB2C(2)        --------->DEAR4(1)        --------->ANAC58        --------->RAP2.6(2)        --------->ANAC46        ------->GAMYB       --------->RAP2.3(1)       --------->MYB46(3)       <------NtERF2       --------->ATERF1(1)      <---------ATERF1(1)      ------>NtERF2      --------->ABI4(1)     --------->AtMYB61     <---------ALFIN1     --------->DEAR3(1)   <---------ATERF1(1)   ------>NtERF2   <-----------HVH21   --------->ABI4(1)  --------->ANAC58                                                                               ----  --------->ANAC46                                 ------->GAMYB                               <-----  --------->DREB2C(2)                             <---------MYB55(2)                          <------  --------->DEAR4(1)                              --------->MYB46(3)                      <-------GAMYB  --------->RAP2.6(2)                            ------>MYB83                            <---------ANAC58  --------->ANAC58                               -------->P                              <---------ANAC58  --------->DEAR3(1) <---------MYB52(1)       ------>ZmHOX2a(2)                  <---------DOF5.7(2)  ------->GAMYB     <-------GAMYB        <---------WOX13(1)                    --------->DOF5.7(2) <- --------->MYB46(3)<---------MYB46(3)--------->HSFB2a(2)                       <---------MYB52(1)<--- ---------ATERF1(1)------>ZmHOX2a(2) <---------HSFB2a(2)                      <-------GAMYB   <------ --------ALFIN1----------->HVH21 <----------DOF2 ------>MYB46(1)          --------->ARR14(2)  <------   tccaccgccaccgccacctgatcgttgtctcttccctttccagattgatccaacctccaaaattttcaaaacccagtttccgttatcgttttcgttgcgg  23160900                                 <---------CCA1(2)                              <------NtERF2                            --------->DEAR3(1)                            <---------DEAR3(1)                           --------->LBD16                           <------NtERF2                              <------ZmHOX2a(2)  <-----------HVH21        --------->ATERF1(1)        ========================HOX2a_HOX2a ----->ARR14(2)           ------>NtERF2               =======================HOX2a_HOX2a ----MYB46(3)             <---------ATERF1(1)         ------>ZmHOX2a(1)------>ZmHOX2a(2)        <---- ---ANAC46               --------->DEAR3(1)     <---------DAG2       <---------ARR14(2)  --------->SPL7 --------LBD16           <---------DEAR3(1)     <----------DOF2      --------->ARR14(2) ------>NtERF2 ------ARR14(2)          <---------ANAC46      <---------DAG2      --------->DEAR3(1)  <---------SPL7 ---ANAC58          --------->MYB52(1)     <---------MYB52(1)      --------->MYB46(3)  --------->ZAT18 ---ANAC58     ----------->RAV1(1)     <---------At5g28300     --------->MYB46(3) ---------->DOF2   ttccggtcccttctctccaacaaaacggcgtcgtcgtctcttaccgttcccttttcctctctcttaccaccgatccgaagaaactcaagcggacgaagac  23161000                                                                                             <-------                       ---------->DOF2                                                    <---------MYB52(1)                     <------NtERF2                                                   <---------ALFIN1                  <------NtERF2                                                     <---------ABI4(2)                 ----------->RAV1(1)                                                --------->MYB46(3)                --------->ANAC46                                                  <---------TCP15(1)               <---------LBD16                                                    --------->PCF2-----            ------>MYB46(1)                 ------>ZmHOX2a(1)                   --------->HSFB2a(1)            ------>MYB83                   --------->ANAC46            ---------->DOF2--------->MYB52(1)         --------->ANAC58            <---------GLK1(1)      <---------DEAR3(1)  <---------HSFC1(2)         --------->ANAC58        <---------MYB52(1)   --------->DEAR3(1)        --------->HSFC1(2)       --------->GLK1(1)  --------->At4g35610 ----------->RAV1(1)    <---------YAB1 ----------->HVH21 ------ID1  --------->MYB52(1) <---------MYB46(3)------->GAMYB <---------ANAC46 <---------HSFB2a(1) -   gacgaagggaaacccaacgcggcagagaagcagccgttgatttctcctcaacagagcctccgatggcgcatatgaaagaagaaggtcccaccggtatcat  23161100                <---------DDF1                ----------->RAV1(1)               --------->At1g77200               --------->DEAR3(1)               --------->DEAR4(1)               ------->GAMYB               --------->DREB2C(2)              --------->DEAR3(2)             --------->MYB52(1)            --------->AtMYB61            <---------ALFIN1            ------->GAMYB           <---------MYB52(2)           <---------MYB55(2)           <---------MYB111(2)           --------->MYB46(3)          -------->P          ------>MYB83  <---------ARR11(3)                                                              <xxxxxxxxxxxxxxxxxx  --------->ARR14(2)                                                        <------------------------ANAC81  --------->ARR11(3)                                                      <-----------GT1    <<<<<<<<  <---------ARR14(2)                                                 --------->AHL20(2)   <<<<<<<<<TBF1 --------->GLK1(1)                                                 ------>ZmHOX2a(1)   <<<<<<<<<TBF1 --YAB1   ------>MYB46(1)                                         --------->TOE1(3)  <xxxxxxxxxxxxxxx ---->At4g35610----------->HVH21    --------->ANAC46              --------->TOE2(3) <<<<<<<<<TBF1  << ---------->ARR10         <---------TOE2(3)                   <----------DOF2 ------>ZmHOX2a(1) <<<<<   cggagatactccaaccaccgacatttttaagaaaacaccctccattccaattcaaacaaaaactctttccttaaaatttcctcttcttcttcttcttctt  23161200                                                          <---------ANAC46                                                          <---------ANAC58                                              --------->GLK1(2)                                            --------->KAN4(1)                                       --------->LBD16    <---------ANAC58                                      <---------LBD16    <------NtERF2                                     <---------LBD16   <---------DEAR3(1)                                <---------ARR14(2)    --------->ATERF1(1)                                --------->ARR14(2)   <-------GAMYB                             <---------ANAC46--------->KAN4(2)        ------>ZmHOX2a(1)    <---------ANAC55(1)    <---------DEAR3(1)  <<<<<<<<<TBF1              --------->ANAC55(2)  --------->LBD16 xxxxxsmallRNA(se3)          <---------ANAC55(2)<---------LBD16 <TBF1 --------->TOE2(3)    <-----------------------TaNAC69(2) xxxxxxxxsmallRNA(se3)      <-------TEIL    <---------KAN4(1)                      ---------->ID1 <<<<<<<TBF1           --------->AHL20(2)  <---------KAN4(2)               ------->TEIL     --------- <<<<TBF1         ----------->GT1  --------->ANAC46 <---------ANAC46  <---------AtLEC2<XXXXXXXXXXXXXX   cttcttcttcctaaatagaaccgtataaaatacgtatacaccgggaataatccggcgttggcgtgcaagtttgaatgaatctcttgtcgtttttgttttt  23161300                     <-----------ARR10                     <---------ARR11(3)                     <---------ARR14(2)                     --------->ARR14(2)             --------->SPL7           <---------SPL7           <-----------HVH21          --------->TOE1(1)                                                         --------->ANAC58          --------->TOE2(1)                                                         --------->ANAC58         ------>ZmHOX2a(1)  *TSS                                                    --------->ANAC46   --------->ZAT2    --------->ARR11(3)                        <---------ZAT2--------->TOE2(3)   <---------At4g35610      <----------DOF2          ------->TEIL            --------->TOE1(3)   --------->At4g35610--------->HSFB2a(1)         <---------YAB1             <----------DOF2   <---------ZAT2   <---------CCA1(2)             <---------ANAC46         ------>MYB83--------->TOE2(3) ->ID1   ===============HOX2a_HOX2a               <---------ANAC55(2)   --------->MYB46(3)          - XXXXXXMIR851-3P <------ZmHOX2a(2)        ------->TEIL      ---------->DOF2------>MYB46(1)        ---   ttctcagcttcctcgtccgatcaaatcttcctttgatagcgatggatgtgttatgtatgttacaaagctggtgaaccaactttaacacgccttaatggat  23161400        ------------>CBF    --------->DEAR3(1)                            ----------->GT1   --------->ANAC46                              --------->DAG2  ------>NtERF2                      --------->HSFB2a(2)            <---------ANAC58 <---------ALFIN1                    <---------HSFB2a(2)            <---------ANAC58            <---- -------->MYB46(3)     <-----------GT1         ---------->DOF2 ------->TEIL                  <------- ------>PCF2      <---------GLK1(2) <---------LBD16      <---------AHL20(2)            <---------AHL20(2)   gccccaccgcatcaatttcagaattttactactacttctctggaaactggaaaggttaataaatgtatttgctggtttgatttcaagttttaattccgat  23161500                                                                                          ===========                                                                                          ---------->DOF2                                                                                      --------->At4g35610                                                                                ------->MYC2                                                                                <-------PIF5                                                                                ------->PIF5                                                                                <-------MYC3                                                                                ------->MYC3                                                                                <-------MYC4                                                                                <-------MYC2                                                                                ------->MYC4                                                                               <---------TGA1a                                                                               <---------ANAC46                                                           --------->REM1(2)   --------->O2                                                    =====================================bZIP_DOF                                                    <----------DOF2            <---------O2                                                   ===============================HOX2a_HOX2a                                                   ------>ZmHOX2a(2)           ======================bZIP_DOF                                                  <------ZmHOX2a(2)            --------->TGA1a                                                  ================================HOX2a_HOX2a                                                 --------->ARR11(3)            <---------ANAC55(2)                   ---------->DOF2               --------->ARR14(2)            ======================bZIP_DOF                  <---------AHL20(2)             <---------ARR14(2)           ------------>OsbHLH66               <---------AHL20(2)                <---------ARR11(3)        <------ZmHOX2a(1) -----WOX13(1)--------->AHL20(2)          <---------AHL20(2)      =======================bZIP_DOF  == --YAB1      <---------YAB1   --------->ICU4 <---------TOE2(3)    <----------DOF2--------->ALFIN1  --   tgattttttgggtttattatataaagtttgcaatttttgagtaatttaagggatctttctgggtagagctatatggaggacacgtggaagatgaaagcgc  23161600                           <---------ANAC46                         <---------ARR11(1)                         --------->ARR11(3)                         ------->TEIL                         --------->ARR14(2)                         <---------ARR14(2)                        <---------CCA1(2)                      --------->ANAC55(1)                      ===============================MYC_MYB                      ================================MYC_MYB                      --------->ANAC58                      --------->ANAC46                      --------->ANAC58                      --------->TGA1a                      <---------TGA1a                      <---------O2                      --------->O2                      --------->ANAC55(2)     <-------GAMYB         ----------------------->TaNAC69(2)  <---------MYB46(3)   <---------ARR11(3) <---------ANAC55(2)    --------->MYB55(2)   --------->ARR11(3)<---------TOE1(2)       --------->MYB111(2)                    ------>MYB46(1) ===============================bZIP_DOF     --------->MYB111(1)        --------->MYB46(3) ===============================bZIP_DOF    <--------P             --------->ANAC46 ------>MYB83    - -------->DOF2      <---------ALFIN1    <-----------RAV1(2)    <-------TEIL       <---------MYB59   <   ctaaagaacttgtttgagtctcccacgtatcttggaacaaaatcaggttgttggactctattagtttcatcgcaacaactaaaacctaactccatcgcct  23161700                                 --------->ANAC55(2)                             <---------YAB1                           --------->AHL20(2)                          <---------YAB1           --------->ZAT18                       --------->ICU4                        <--------HAHB4             <---------ZAT18                       <---------ATHB51                        <---------ICU4        <---------MYB52(2)              <---------ARR14(2)                       <---------YAB1    ----------->GT1                      --------->ARR14(2)  ---------->DOF2      --------->ICU4    --------->ANAC55(2)      --------->ARR14(2)     --------->AHL20(2) -------->AHL20(2)   --------->YAB1      <---------ANAC55(2)      <---------ARR14(2)     <---------AHL20(2) ---------AHL20(2)  <---------YAB1      <---------TOE2(3)  ---------->DOF2   <------ZmHOX2a(1)   aattaaaagagacacaagtgttttcattattatttatgtgataacgtaactagcgcacaaaaaaagagtattcgaaataggattcacagaaataattcaa  23161800  Previous    Next  AGI:  At3g62590.1    Description:  lipase class 3 family protein. similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT1G02660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40092.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) Range:  from: 23158894    to: 23161328    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62600.1    Description:  DNAJ heat shock family protein. similar to ATJ2 (Arabidopsis thaliana DnaJ homologue 2) [Arabidopsis thaliana] (TAIR:AT5G22060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72389.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971) Range:  from: 23161766    to: 23164486    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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