Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <----------DOF2         <-----------GT1        <<<<<<<<<<GT-3b    <---------AHL20(2)                   --------------->AtSPL8    --------->AHL20(2)               <---------------AtSPL3   <---------AHL20(2)                --------------->AtSPL8   --------->AHL20(1)                <---------------AtSPL8                   <---------AHL20(2)   <---------AHL20(1)    --------->AHL20(2)      <---------GLK1(2)           --------->AHL20(1)   --------->AHL20(2)  --------->TOE2(3) --------------->AtSPL3              <---------AHL20(1) --------YAB1   <---------YAB1<-----------GT1<-------TEIL <---------AHL20(2)<---------AHL20(2) --------AHL20(2)    <---------AHL20(2)  ------->TEIL<---------YAB1       --------->AHL20(2)   tataatttatttttctttcttattaacttaaataacaaatttgtacgtacacattcttatttttttgttcatccatatatatattttgaactcacccttg  23130400                                                                                                    -                                                                                                    <                                                                                                   --                                            <---------AHL20(2)              <---------DAG2         --                     ----------->GT1        --------->AHL20(2)              <----------DOF2     <----        ----------->GT1           --------->MYB52(1)                     <-----------GT1   <---------   --------->ANAC55(2)            <-----------GT1<-----------GT1 <---------AHL20(2)    <-----------GT1   tttttaagtaatgtaaaatggagttgaaaaaatgaataactgtttataaattttcatcttaaatgatttttttttttacttttcaaattatacctttagg  23130500    --------->MYB46(3)    <---------ATHB12   ------>MYB46(1)   ------>MYB83   -------->P  ------>MYB46(1)  ------>MYB83 -------->MYB46(3)    --------->YAB1                                                       <---------ARR14(2) ---------MYB59      <---------YAB1                                                        --------->ARR14(2) ------->ANAC58     --------->ARR11(3)                         <-----------GT1             --------->GLK1(2) ------->ANAC58     <---------ARR11(3)  ---------->DOF2 <---------AHL20(2)         --------->ICU4 --ZmHOX2a(1)--------->ANAC58<---------YAB1            --------->AHL20(2)        ---------->DOF2 -DOF2       --------->ANAC58------->TEIL            ------->TEIL             ----------->GT1   aacccaaccatttgcaccctaatatcatatgaatattgacaacaaagactacatgaatttaaaattttcaacttgcagaattgtaaagatgagaatttgc  23130600                   <----------DOF2                                             --------->GLK1(2)               <----------DOF2                                                 <---------ARR11(3)         <---------bZIP60(2)                                                   --------->ARR11(3)         <---------ANAC58                                <----------DOF2      --------->CCA1(1)         <---------ANAC58          ----------->GT1   <---------CCA1(2)        --------->RVE1(1)    <---------DOF5.7(2)   ------->TEIL            <-----------GT1     ------->TEIL                  -  --------->DOF5.7(2)    <---------CCA1(2)  <----------DOF2          <---------CCA1(2)  --------->ANAC46   actcgttaatgacgttcctttctttttgaatcttattttgttaattcttttttttctatctttgattttttgtatctaaaaaatctctaaacgaaaacgt  23130700                                                                                             --------                                                                                          <----------                                                                                  --------->LBD16                                                  --------->AHL20(2)             <---------ANAC55(2)                                            --------->AHL20(2)                   <---------ANAC46                                            <---------AHL20(2)                   <---------ANAC55(1)                                           --------->AHL20(2)<--------HAHB4      <---------ANAC58                                          <---------YAB1     --------->ATHB12    <---------ANAC58         ------->TEIL                  --------->AHL20(1)    <---------ICU4      --------->ANAC55(2)      <---------REM1(1)                <---------AHL20(2)    --------->ATHB51 <---------ARR14(2)  --- <xxxxxxxxxxxxxxxxsmallRNA(s)         --------->AHL20(2)     -------->ATHB1   --------->ARR14(2)  <-- <---------At4g35610              <---------AHL20(2)        --------->ICU4  <---------HSFB2a(1)  ---- --------->At4g35610             --------->AHL20(2)    --------->YAB1       --------->HSFB2a(1)  <--- ------>TEIL            ----------->GT1--------->AHL20(2)   <---------YAB1 <---------TOE2(3)---------   tgcatctgatgtaccatagttttttcgagtaaattttaaattttattaaaaaaaaaatgagaattattagataaacaaaggttccgtgatataaacccaa  23130800                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --   ---------->DOF2                                                                                 <-  <---------AHL20(2)                                                                               <-  --------->AHL20(2)                                        ---------->DOF2                        <- ---->CBF                                          <---------AHL20(2)                              -- -GT1                                             <---------AHL20(2)                               == ------>AHL20(2)         --------->AHL20(1)       --------->AHL20(2)                            ----- -------AHL20(2)         <---------AHL20(1)       <---------AHL20(1)                          <------ ----->AHL20(2)          --------->ARR11(3)   <---------AHL20(2)    ---------->DOF2           <------ ------ATHB12       ------------>CBF     <----------DOF2    ========================================= >ANAC46            *TSS <---------ARR11(3)   --------->AHL20(2)    =================================   ttaataaaagaaacaacttaggcacaatatatagcctaagaagcttttttaatttttttttttaaagaagaaaagagagagaattgttcaattgatgcgc  23130900     --------->ARR14(2)     <---------ARR14(2) -----------HVH21 ------->bZIP60(1) --------ANAC46 --------O2 --------DEAR3(1) ------->O2 ------->bZIP60(2) --------TGA1a --------bZIP60(1)                      --------->REM1(1) --------bZIP60(2)                  <------NtERF2 ------->TGA1a                      --------->ATERF1(1) ========================bZIP_DOF  ------>NtERF2 ------>HVH21                      <---------ATERF1(1)                                       -------- ---ANAC58                         <---------RAP2.3(1)                                       <------- ---ANAC58    ---------->DOF2     <---------ANAC46                 <---------At5g28300       <------- ========bZIP_DOF                 <---------RAP2.6(2)     ----------->GT1         --------->YAB1 ========bZIP_DOF                ---------->ID1<----------DOF2    <-----------GT1--------->At4g35610   gacgtcggatttgatgaaaaggaagttttcgacttggcgcctacaactacttttgtaggcctgaaaattcacagtcttccctcatcagaacacaatatct  23131000                                                                                                   <-        <----------DOF2                            --------->LBD16  <---------ICU4                 <-      ------>ZmHOX2a(1)            <---------TOE1(3)       --------->ANAC58                <------ZmHOX2a(1)   ------>ZmHOX2a(1)      <------NtERF2          <---------LBD16 --------->YAB1        <---------TOE1(1) ->ARR11(3)              ------>NtERF2   <-----------GT1   --------->ANAC58   --------->ANAC46 <----- --ARR11(3)             --------->DEAR3(1)<-----------GT1---------->DOF2      --------->ANAC58 ------ --AHL20(1)  ---------->ID1        <---------TOE2(3)   <---------ZAT6         --------->ANAC58<------ZmHOX2a(1)   ttctcctcctcttttgtcttccttcgccgtcgattttaaggttttatcttctccgtagtgaaagcactgataatttctccaaggaatttacgaggaggat  23131100                                         <---------ANAC58          ----------->RAV1(2)            <---------ANAC58                            <<<<<<<<<MYB2   --------->MYB52(2)      <-----------GT1                                     --------->ARR14(2) -----MYB46(1)<---------ANAC46           <---------ANAC46                      --------->GLK1(2) -----MYB83 ------>ZmHOX2a(1)<---------YAB1        --------->TOE2(3)           <---------ARR14(2) ----ARR14(2) <---------ANAC58         <-----------HVH21        --------->At4g35610<------MYB83 --->ARR14(2) <---------ANAC58        <-----------RAV1(1)       ------>ZmHOX2a(1)  <------MYB46(1)   ttggtttgtttctcctgcgtgttagagttttacgatttctctgtcgtttgatttcttaattctatcctctgagagaacgagaatttggttttcgttttcg  23131200                                  ---------->ID1                                 <-------GAMYB                                           --------->LBD16                                <---------MYB46(3)                                       <---------HSFB2a(2)                                --------->MYB52(2)                                      <---------LBD16                            <---------ANAC58                                            --------->HSFB2a(2)                  --------->ARR14(2)             --------->ARR14(2)       <---------ANAC58     <-------GAMYB<---------ARR14(2)             <---------ARR14(2)       <---------ANAC58    <------   <---------TOE1(3)        <---------ANAC58  ------------>CBF<------------CBF          <---------HSFB2a(2)   <---------TOE2(3)    <------------CBF<------------CBF---------->DOF2   <---------ANAC46--------->LBD16   aatttagggttgaagaagcggtttcgcattgggtttgttgtctattgagccaatttgctaaaggaattgaaacgttgcgagtttttgtttcccggaggtc  23131300  Previous    Next  AGI:  At3g62499.1    Description:  contains InterPro domain YT521-B-like protein (InterPro:IPR007275) Range:  from: 23130820    to: 23131125    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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