Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------WOX13(1)                                                       <---------ICU4                                                       -------->HAHB4             --------->ANAC58                                                       <--------ATHB1             --------->ANAC58                                                 <------ZmHOX2a(1)               --------->SPL7                                  --------->ANAC46     --------->ATHB12        <---------SPL7       <                        --------->YAB1       ---------->DOF2                 --------->HSFB2a(2)   -- <------ZmHOX2a(2)     <<<<<<<<<ARR2 ---------->DOF2  <---------YAB1         <---------HSFB2a(2)  --- -----------ARR10    --------->WOX13(1)----------->GT1--------->ICU4     <---------DAG2    --------->At4g35610 ------->At4g35610  --------->MYB46(3)--------->DAG2--------->YAB1    <-----------GT1      <---------At4g35610 --->ANAC46--------->AHL20(2)  --------->ZAT18   --------->YAB1    --------->ANAC46    <----------DOF2   cagatcaaaccattttaaaacaacaatcaaatgtacacaaaaagtagaaaaggataatgattgaattctacttcaccttctggtacgcgcttgagctcga  23116200                                                                             --------->GLK1(1)                              ------>ZmHOX2a(1)                              <----------TaMYB80                            ------>ZmHOX2a(2)                                <---------GLK1(1)                           <------ZmHOX2a(2)                                --------->ARR14(2)                          <---------GLK1(2)                                 <---------ARR14(2)      ----------->GT1     <---------ARR14(2)                                <---------ARR11(3)      <---------ANAC46    <---------ARR11(3)                                --------->ARR11(3)     <------NtERF2        --------->ARR14(2)                                ---------->TaMYB80   <---------ANAC46    ------>ZmHOX2a(1)                                <-----------RAV1(2)   <---------DEAR3(1)  --------->LBD16                      <---------WOX13(1)  <-----------------AGL1  <---------LBD16     <---------LBD16                     --------->ATHB12 <------ZmHOX2a(1) --------->LBD16 ------>ZmHOX2a(1)                  --------->ANAC58    <---------LBD16 ---------ATERF1(2)  ----------->RAV1(2)    --------->At4g35610       --------->SPL7              <-- ------->DEAR3(2)==================HOX2a_HOX2a      --------->ANAC58<---------SPL7               ---- ------>MYB52(1) =================HOX2a_HOX2a  --------->At4g35610--------------->AtSPL3    ---------   taccggcggagtgaaactccttatcctggatcctctgattcgtctcatcagcataagccttgattgagaccgtaccaggatatcccattttcgcaaaagc  23116300                                                            ------->PIF5                                                            <-------PIF5                                                            <-----------HVH21                                                           <---------O2                                                           --------->O2                                                           --------->ANAC58                                                           --------->ANAC58                                                           --------->bZIP60(2)                                                           <---------TGA1a                                                           --------->TGA1a                                                           --------->ANAC46                                                         <---------ALFIN1                                             ------>ZmHOX2a(2)                                             =================HOX2a_HOX2a                                            <------ZmHOX2a(2)                 <---------DAG2                                            ==================HOX2a_HOX2a<---------ANAC58                                           --------->ARR11(3)    --------->LBD16  <---------YAB1    <---------TOE2(3)                      --------->ARR14(2)   <---------HSFB2a(2)   ------>ZmHOX2a(2) -------RAP2.6(3)                          <---------ARR14(2)   --------->HSFB2a(2) --------->ARR11(3) ----->RAP2.6(2)  --------->AtMYB61        <---------ARR11(3)   <-----------RAV1(2) <---------ARR11(3) ->DOF2        --------->ARR14(2)   <-----------HVH21  ------>ZmHOX2a(1) <---------ANAC58   cgtattgatgttcttcgaaacctcaccagcactgagaccatcagggatcttgtagtcctccacgtcccagaagacgcttgccttatgatcttccagtctt  23116400                                     --------->ANAC46                                  <---------ARR14(2)                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     --------->ARR14(2)                     <---------ARR11(3)      --------->LBD16--------->ARR11(3)                                                         -----     <-----------RAV1(2)          --------->ARR14(2)                                        <------NtERF2     <---------HSFB2a(2)    <-----------GT1                 ==============HOX2a_HOX2a     <---------DEAR3(1)     --------->HSFB2a(2)----------------------->TaNAC69(2)  <------ZmHOX2a(1)             --------->ALFIN1 <-----------HVH21   <---------ARR14(2)         --------->LBD16    ------>ZmHOX2a(2)     <---------LBD16   cgatgtcccagaagagcatcagggatcttactaccgtattcgctactagccgtggttttgaaggactgatcgagacatttagagagagagaggcggagca  23116500                                 --------->LBD16                                              <------                                 ------>NtERF2                                            --------->LBD16                                <---------ETT(1)                                         --------->ANAC46                                --------->ANAC46                                         --------->ANAC58                               <---------LBD16                                           --------->ANAC58                             <---------ARR14(2)                                         ------>NtERF2                             --------->ARR14(2)                                         --------->LBD16                            <---------ZAT2                                              <---------LBD16                            <---------At4g35610                     <---------TOE2(3)  <---------ANAC46     --------->ANAC46       --------->At4g35610                   ---------->DOF2 --------->CCA1(2) *TSS --------->CCA1(2)          --------->ZAT2                 <---------LBD16        <---------At4g35610 ----->DOF2        <---------TOE2(3)                     ----------->HVH21        --------->At4g35610   aaggtatacgagactcgagcaaaggtttacagctccggcactgacttagaaacatggttttgacggagtaaaggaagacgagagagatgccgcgcaaata  23116600                                        --------->TOE2(3)                                        ------->GAMYB                                       <---------MYB55(2)                                       --------->MYB46(3)                                      -------->P                                      ------>MYB46(1)                                      ------>MYB83                                    <---------MYB46(2)                                    <---------MYB111(2)                                    <---------MYB111(1)                                    <---------MYB59                                 <-----------GT1         --------->ANAC58               ------>MYB83    --------->YAB1   <---------TOE2(3)           ------->TEIL     <--------HAHB4     >>>>>>>>>WRKY18      <----------DOF2        <---------ANAC58    --------->YAB1    ----------->HVH21     ------>ZmHOX2a(1)        <---------ANAC58   <---------YAB1     --------->WRKY12<---------ALFIN1     <----------DOF2--------->GLK1(1)--------->MYB55(1)  --------->ANAC58 ---ARR14(2)   ------>MYB46(1)<---------YAB1<------------CBF----------->RAV1(1)   gggttttctttcgtacctacagaaaccctattattataccaacctccattgacgaagagaagcaccagtcctttaaactaataagcccatttgtaaatgg  23116700                                                                                        <---------MYB52(1)                                                  <---------YAB1                 <<<<<<<<<SARD1                                    <---------ANAC58                             <<<<<<<<<CBP60g            --------------->AGL15   <---------ANAC58             --------->YAB1 ------>MYB46(1)     -   <----------DOF2              <----------DOF2  --------->At5g28300            ------>MYB83        -   gccttcttttagaccctataagagcaaactctctcttttcttggctaatactgtaattgtttttttgtaataacccaaaaccaaatttctcttagttttc  23116800                                                                            <---------At4g35610                                                                            --------->At4g35610                                                                     <---------AHL20(1)                                                                     --------->AHL20(1)                                                                  --------->AHL20(2)                                                              --------->AHL20(1)                                                              <---------AHL20(2)                                                              --------->AHL20(2)                                <----------DOF2              <---------AHL20(2)                  <---------AHL20(1)                         --------->AHL20(2)                     -   <---------AHL20(2)      <---------At4g35610              <---------AHL20(1)                      <  --------->AHL20(2)    <---------MYB52(1)       --------->YAB1   <---------AHL20(2)           <----- -------->TOE2(3) --------->ARR11(3)            <---------ATHB12 <---------AHL20(2)            ------ -------->YAB1   <---------CCA1(2)        --------->TOE2(3) --------->AHL20(2)        <-------TEIL <-   aatattaattcaattgttcatatattgttagcttctttcttatttcttaaatcataaaacaaaataatttatatattaagctccaatatacataagttta  23116900                                                                  ----------->GT1                                                            ---------->DOF2                                <---------TOE2(3)          --------->AHL20(2)                       -          <----------DOF2       --------->MYB59            <---------AHL20(2)                  <----- -------->AHL20(2)              <---------TOE1(3)  ------>ZmHOX2a(1)                          ------>ZmHOX2a(2) ---------AHL20(2)           --------->CCA1(2)    --------->TOE2(3)                           ======= ----AHL20(2)        <------ZmHOX2a(2) >>>>>>>>>WRKY18  --------->YAB1       <----------------------- --->AHL20(2)        =====================================HOX2a_HOX2a  <---------YAB1       <-------- --------AHL20(2)   --------->ARR11(3)----------->HVH21<---------AHL20(2) <----------DOF2   ---------   atttatatatgactttaagagagatcaagagatttaggttttgacagagtttcctaaataataaaagagagttattcttttgttttatgttcttgatctt  23117000    --------->ZAT6 <---------------AGL15 --------------->AGL15 ---------------->AGL2                                   ---------->DOF2 -----DOF2                                      <---------LBD16                                     < ========================HOX2a_HOX2a          <---------LBD16--------->TOE2(3)                    <-- -ANAC81          <------ZmHOX2a(1)         <---------ARR14(2)                                    <-- -ARR11(3)    --------->TOE1(2)            <---------GLK1(1) --------->TOE1(3)         --------->ICU4 >ARR11(3)    --------->TOE2(2) <-----------GT1 --------->LBD16               <---------YAB1     ----   tctctaaaactagaaatctaggatagaaatgttatcacattttgggtttctggggattttaaagcttaatgtcaagtttgatgatagaaatgttgaagtt  23117100  Previous    Next  AGI:  At3g62460.1    Description:  similar to PBS lyase HEAT-like repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G62530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40196.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 23115641    to: 23116600    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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