Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------At4g35610                                                        <---------ZAT2                                                        --------->ZAT2                                                        --------->At4g35610                                                   --------->GLK1(2)                                                   ------->TEIL                                                   <-----------ARR10      <---------HSFB2a(2)                          <---------ARR14(2)      --------->HSFB2a(2)                          --------->ARR14(2)          --------->ARR14(2)     ----------------->AGL1                     --------->ANAC58               <---------ARR14(2) ------MYB46(1)                                 --------->ANAC58              <---------HSFB2a(1) ---------MYB46(3)                             ------>NtERF2                  --------->HSFB2a(1) ------MYB83                               --------->ANAC46                   --------->HSFC1(2) ------P                                   --------->ANAC58                   <---------HSFC1(2) -----MYB46(3)        --------->ATHB12     --------->ANAC58            ----------->HVH21    ------->GAMYB -----DOF2           <---------ATHB12    ------>ZmHOX2a(2)             --------->ANAC46    --------->ANAC46 ---ANAC58      --------->ANAC58       --------->ARR11(3)         --------->PCF2         --------->MYB52(1) ---ANAC58      --------->ANAC58   ----------------------->TaNAC69(2)<---------ALFIN1--------->GLK1(1)   gttggtttccaaaacgagacccaatgactgaaatgaagtttgatctcgccacgaatctagctgagagaggcccacgacgaaggtccgatatcaacggcat  23073000                                                                         --------->HSFB2a(2)                                                                ----------->GT1                                                             ---------->DOF2                                                        ----------->RAV1(2)          <------ZmHOX2a(1)              <---------ALFIN1                        <---------ALFIN1   <---------HSFB2a(2)            --------->AtMYB61                        -------->P--------->DAG2      <---------TOE2(3)           --------->MYB46(3)                        ------>MYB83       <---------LBD16      --------->WRKY18(1)                            ------>MYB46(1) --------->GLK1(1)              -     <-----------HVH21             ---------->DOF2 --------->AtMYB61 <---------GLK1(1)              -   tcttgcaggtcaaaccacactcgctcttgagcattttcaaagccttgtttataccaacacctgtaaaggtgaaatctggaagattgaggaaattggtgag  23073100                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             --------              <-----------GT1                                            --------->GLK1(2)   <-------        <---------ZAT2                           <---------ARR14(2)  --------->HSFB2a(2)    <--------        <---------At4g35610                --------->MYB59       --------->At4g35610       --------->LBD16        <------NtERF2                  --------->ATHB12          <---------ZAT2  <---------ANAC58 <--        --------->At4g35610           --------->ICU4             --------->ZAT2  <---------ANAC58 --- -------->CCA1(2)                     <---------YAB1           --------->ZAT14  --------->ZAT2<------ -------->MYB52(1)           <------ZmHOX2a(1)   --------->GLK1(2)   <---------HSFB2a(2) <---------LBD16   agaaacgggcagcttattaccttgtacataaggaagcgggattattaggcaattctggccatcactgagctcgagaatcacgagcttgctctccggtggg  23073200                                ------->TEIL                                <---------ARR14(2) -MYB46(1)              ------>ZmHOX2a(2) -MYB83                <------ZmHOX2a(2) -->MYB55(2)       --------->MYB46(3) -P             <---------MYB55(2) --MYB55(1)   =================HOX2a_HOX2a ->ALFIN1     ================HOX2a_HOX2a                                                   --------- --ANAC46  ------>NtERF2--------->HSFB2a(1)                                            <---------ZAT14 -MYB52(1)--------->DEAR3(1)    --------->ARR14(2)                     --------->ANAC46--------->ZAT14 -------ARR14(2)--------->REM1(1)            --------->ARR11(3) <---------ICU4       --------->TGA1a ------>ARR14(2)--------->MYB46(3)         <---------ATHB12   =================================bZIP_DOF ---MYB46(3)  ------>ZmHOX2a(1)<---------CCA1(2)              <----------DOF2        --------->ANAC46   tattcgctatcgcctcctacaaccgatcgttctgtatccagaccgatgattttgttcgcgttttctttattacacagaaatgttctcacttcactggtaa  23073300                                                                 <---------DDF1                                                                <<<<<<<<<<bZIP23                                                                --------->ETT(2)                                                                >>>>>>>>>>bZIP19                                                                <---------ETT(2)                                          --------->ARR14(2)    <<<<<<<<<<bZIP19                                          <---------ARR14(2)    >>>>>>>>>>bZIP23                                         <---------CCA1(2)     --------->DDF1                    <-----------HVH21  --------->AtMYB61  <---------MYB46(3)        <------ZmHOX2a(1)    <-----------HVH21               --------->AtMYB61--------->ZAT14         <---------TOE2(3) >YAB1         --------->MYB46(3)  --------->MYB46(3)<---------ZAT14       ---------->DOF2      -----   tgtctctgtcatttctagccactgtcactctgatgcgaccaccatatccagtttctacagtggatgtcgacatctctcaaaggtaaggagagaatgggat  23073400                              --------->AHL20(2)                         <------NtERF2                         --------->LBD16                         ------>NtERF2                        --------->ANAC58                        --------->ANAC58                        --------->RAP2.6(2)                        --------->ANAC46                       --------->SPL7                      --------->ATERF1(1)                     <-----------HVH21                     <---------SPL7                    <---------ANAC58                    <---------ANAC58                   <-------TEIL                                  <----------DOF2                --------->GLK1(1)                               <---------DAG2                <---------GLK1(1)         --------->DAG2      <---------TOE1(2)          --------->TOE1(2)   <-----------TBP                 ------->TEIL                        <-- ----------->GT1--------->At4g35610      ---------->DOF2     <---------ALFIN1               --------- ---->CCA1(2)   <---------At4g35610   <---------ANAC46---------->DOF2                 ------------>CBF   atatgtttaaaacttgggagatgcgtccgccattatataggcgtaaagggaataacaaaagtcgcacctttggagaagaaaacgaagagacaatacgacc  23073500                                              <--------HAHB4                                      <--                                              --------->ATHB51                                 <-----                                      <---------ARR11(3)                              <---------ARR11(3)                                     <---------ZAT2                                  <---------ZAT2                                  ------->GAMYB                                   ------->GAMYB------                                 <---------ATHB12                                --------->MYB46(3)                                 --------->MYB46(3)                              <---------ATHB12----                                ------>MYB83  <---------ICU4                    ------>MYB46(1)<-----                    <----------DOF2  --------->ZAT2                 <----------DOF2  --------->ZAT2                 --------->ARR11(3) ------>MYB46(1)              --------->ARR11(3) ------>MYB83<----     <-----------HVH21          ------>MYB46(1)      <-----------HVH21          -------->P    <------ --------DOF2    <---------ARR11(3) ------>MYB83<---------YAB1   <---------ARR11(3) ------>MYB46(1) >ANAC46     ---------->DOF2    -------->P   --------->ICU4  ---------->DOF2    ------>MYB83------->TEIL   cttttaatgtcaccacaaagttctttcaagttccaaccaagctctgcattattaatgtcaccacaaagttctttcaagttccaaccaagctctgcatctt  23073600         --------->ANAC58                                                   --------->CCA1(2)         --------->ANAC58                                        --------->TGA2(2)        <---------LBD16                                        --------->O2<---------ARR14(2)        --------->ZAT18                                        --------->bZIP60(2) ----------CBF                                                 --------->TGA1a -----DOF2                                                     <---------TGA1a --------->AGL15                                               --------->ANAC58 ----->ATHB12                   <------ZmHOX2a(1)              --------->ANAC46 ----------AGL15      <---------DAG2                           --------->ANAC58<---------LBD16    <-- -----YAB1            <----------DOF2             --------->YAB1<-----------HVH21                <--- -----------AGL3--------->RAP2.6(2)       ----------->GT1     ------->TEIL --------->ARR14(2) -------   tattgggaagcgcggaagtcgcaacttttggagaggaaaacgaagagtcaaaacataactaatgcacgtcagaacgagatttggggaaactttgaaatta  23073700                                             ---------->DOF2                                          --------->LBD16                                          --------->HSFB2a(2)                                          ------>ZmHOX2a(1)                                          <---------HSFB2a(2)                                         <---------LBD16                                        ----------->RAV1(2)                                     -----                                     --------->At4g35610                                        -----          --------->ARR11(3)         <---------At4g35610                                  >>>>>>>>>WRKY18      ---------->DOF2             --------->DOF5.7(2)                            <---------ARR14(2) -------ZAT6       <------ZmHOX2a(2)--------->MYB52(2)                           --------->ARR14(2) ------YAB1        ==============================HOX2a_HOX2a                     --------->GLK1(2) -->ICU4  <---------ARR11(3)      <---------MYB52(1) --------->ZAT14            <---------GLK1(2)   -   gtattaaacaaagttcttccgatcaagttttgagacgttagctcctggaaagcagagaactcttgcaaaccatggccagacagaatccattttgacagaa  23073800                                                                              <---------ICU4                                                                             --------->ICU4                                                              --------->TOE1(2)                                              --------->ARR11(3)             <---------YAB1                                              <---------ARR11(3)           --------->YAB1        <-------TEIL              ---------->DOF2   ---------->DOF2        <---------ICU4<-----------GT1 ---->ANAC58                 <---------ARR11(3)  --------->TOE2(3)        <<<<<<<<<ARR2  --------->ZAT6 ---->ANAC58                 --------->ARR11(3)  <----------DOF2          <---------ATHB12 --------->DOF2             <---------CCA1(2) <---------AHL20(1)          <<<<<<<<<ARR1<-----------GT1   gcaaaagagattcatatgcacaaatgaaacatatctcaaagaaaacaatatctttaaaggctaaactacgagtacaatcataatggttttatcactactc  23073900  Previous    Next  AGI:  At3g62320.1    Description:  nucleic acid binding. similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT5G48350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18255.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) Range:  from: 23072780    to: 23073373    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62330.1    Description:  zinc knuckle (CCHC-type) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO40140.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) Range:  from: 23073794    to: 23076394    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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