Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------SPL7                                  ------>NtERF2                                 <---------RAP2.6(2)                                 <---------ANAC58                                 <---------PCF2                                 --------->DEAR3(1)                                 <---------ANAC58                                <------NtERF2                                --------->RAP2.3(1)                                --------->ATERF1(1)                               ------>NtERF2                               <---------RAP2.3(1)                               <---------ATERF1(1)                               --------->ABI4(2)                               <---------ERF1                              --------->ALFIN1                              <---------DEAR3(1)                           <---------DEAR3(1)                       ---------->DOF2                                                  <---------ARR14(2)                   ------>ZmHOX2a(2)                                                <----------------                  <------ZmHOX2a(2)                                    <------MYB83 -----------------                 <---------ARR14(2)                                    <------MYB46(1)  --------->ARR14(2)                 <---------ARR11(3)  --------->LBD16                >>>>>>>>>CBP60g <----------------                 --------->ARR14(2)<------NtERF2            <----------DOF2         -----------------                 --------->ARR11(3)--------->ATERF1(1)    ------>ZmHOX2a(1)---------->DOF2 ----AtLEC2  ---------->DOF2<---------MYB46(3)      <-----------GT1 >>>>>>>>>SARD1<---------ARR14(2)   tggcaagagggaaggaaaagatcggaagagcggtggcgcccgagactgcgaaattgactcctcttttgaaatttggtgaaagtgaatccaaatatggact  23061700                                                                     ------->TEIL                      <---------At4g35610                        --------------->AtSPL8                      ----------->RAV1(2)                        <---------------AtSPL8            --------->AHL20(2)                       --------->AHL20(1) -AGL2      <---------AHL20(2)                      --------->AHL20(2)                ---------->DOF2 >AGL3    --------->TOE2(3)             ----------->GT1  <-----------GT1             --------->AHL20(2) -AGL3    <----------DOF2              --------->DAG2<---------AHL20(1)              <---------AHL20(2) >AGL2  --------->ICU4--------->At4g35610       --------->AHL20(2)   <-------TEIL<---------AHL20(2)   caaatatgtcatctttaaatgttcacctgatcatatatcaaaaggtttaatcaaatatataacattacatgtacataaaacatatatttaaagaattgaa  23061800                                                       --------->WRKY38(1)                                                       <---------ETT(2)                                             <---------DOF5.7(2)                                            <---------WRKY45 ----------->HVH21                                            <---------WRKY12<-----------HVH21                  ---------->DOF2           <---------WRKY38(1)            ---------->DOF2       --------->ZAT6       --------->ETT(2)   actcttgttgaaaaaaaagagaaagaattgggactcacagtagaagtcaacgatgagtcgaccgtcaccgagacgaccagtgcctctatggaagaaggta  23061900                                                      <------NtERF2                                                   <------NtERF2                                                  <-----------HVH21                                               --------->LBD16                                             <---------LBD16                                            ------>ZmHOX2a(1)                                       <---------GLK1(1)                                 <---------ANAC46                                       --------->GLK1(1)                                 <---------ANAC58                                      <---------ARR11(3)        <---------DEAR3(1)       <---------ANAC58                                      --------->ARR11(3)        --------->DEAR3(1) <---------TOE2(3)-                                --------->ANAC58 --------->ALFIN1  --------->DEAR3(1)    <xxxxxxxxxxx                                --------->ANAC58 ----------->HVH21<------NtERF2<---------YAB1     <--                   <------ZmHOX2a(1)--------->ANAC58--------->ETT(1)        <---------YAB1        <--               <---------MYB52(1)   --------->ANAC58<---------ANAC46       <-----------GT1        <--   atgccatgagggagtccgataggaagtccaactccagcaagaactcctccggtgtcggagttagagtcgccgaagtttatcaatataggtttcttgtttg  23062000   <-----------GT1 ---------->GT1 xxxxxsmallRNA(i) -------ANAC58                                                                                      < -------ANAC46                                                                 --------->ZAT14      < -------ANAC58 <---------ZAT6 ---------->DOF2                          <------ZmHOX2a(1)   <---------   acttgtaactagtttcagagttagagcaaaccaaaagagagagacataaaactaagaagaagcattgtagagaggaaacagtgtaatccatttcttttga  23062100                                   <------ZmHOX2a(2)                                  --------->ARR14(2)                              <-----------GT1                             <-------TEIL                            --------->CCA1(2)                           --------->ARR14(2)                           <---------GLK1(2)                           <---------ARR14(2)                                     --------->AHL20(1)                           *TSS   <---------ARR11(3)                              <---------AHL20(2)                         <---------YAB1                                   ----------->GT1                       --------->YAB1                                   ---------->DOF2                      <---------ATHB12                             <---------ANAC58 ---------ANAC58  --------->AHL20(2)       <----------DOF2         <---------ANAC58 ---------ANAC58  <---------AHL20(2)------>ZmHOX2a(2)              <---------ANAC46             ----- -DOF2           --------->YAB1   <---------ARR14(2)          <----------DOF2     --------->AHL20(2)<   attcttgctactcagataattttaatcaagattcacgatctgaagcttttacatatagtaatgtctttggcttagaaagtcaaattttttgaatgtaagt  23062200                                                                                ------>ZmHOX2a(2)                                                                                =====================                                                                               --------->SPL7                                                                               ======================                                                                           ------>ZmHOX2a(2)                                                                 ------->TEIL  <------ZmHOX2a(2)                                                          <---------ATHB12 ==========================                                                         --------->ANAC58 --------->CCA1(2)                                                         --------->ANAC58 <------ZmHOX2a(2)                                                     --------->ANAC58     ===========================        <------------CBF  <---------AHL20(2)         --------->ANAC58    <---------ARR14(2)    <-----      <---------YAB1      --------->AHL20(2)         --------->ANAC46    --------->ARR14(2)--------->HSFB2a(2) --------->YAB1           ----------->TBP          ---------->DOF2       --------->AGP1    <---------HSFB2a(2) <---------ICU4         ----------->TBP      ---------->DOF2  <---------ATHB12<---------ARR14(2) ------->CBF  --------->ANAC46        <---------AHL20(2)--------->WOX13(1)--------->ARR14(1)  ------- ---------ATHB12      --------->AHL20(2)  --------->TOE2(3) --------->WOX13(1)--------->ARR14(2) <---   caataagtactattgcaagtcgcattatataaatctctaaataatctcaaagtaaaagcaatcaatcaacctatagatccgatcggccatgttctataag  23062300                                  --------->SPL7      --------->ARR11(3)          >>>>>>>>>SPL4 <-----------HVH21                >>>>>>>>>SPL7                              ------->TEIL ===HOX2a_HOX2a                 <---------SPL7                         <---------AHL20(2) ===HOX2a_HOX2a                 --------->LBD16              --------->ARR14(2) ===HOX2a_HOX2a               --------------->AtSPL8         <---------ARR14(2)<---------MYB59 ===HOX2a_HOX2a       --------->AHL20(2)                 ----------------->AGL1<---------DAG2 ----TOE2(3)          <---------AHL20(2)               <----------ID1 --------->AHL20(2) --------->ARR11(3) -->YAB1             --------->YAB1            <---------WOX13(1)     <---------AHL20(2) <---------AHL20(1) ---ZmHOX2a(1)  <---------At4g35610         <---------AHL20(2)   --------->LBD16         --------->AHL20(1)   gattgtcagaacttgttgagctattaaaatactccgtacaacttatttgattaatatgggccaaatccgaaaataaatggaccttatcgaatattttgtt  23062400                                                                             <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                           <---------ARR11(3)                                                                           --------->ARR11(3)                                                                           --------->ARR14(2)       <                                                                           <---------ARR14(3)       <                                                                 ----------->HVH21                  <                                                                <xxxxxxxxxxxxxxxsmallRNA(le3)      <x                                                                <xxxxxxxxxxxxxxxsmallRNA(si3)      <x                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)        <x                                                               --------->ANAC55(2)                 <x                                                               --------->ANAC46                    <x                                                               --------->ANAC58                   <xx                                                               <---------ANAC55(2)                ---                                                               --------->ANAC58                   ---                                                               <xxxxxxxxxxxxxxxxsmallRNA(le3)     <--                                                              <xxxxxxxxxxxxxxxxxsmallRNA(le3)     <xx                                                              xxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <xx                                                              xxxxxxxxxxxxxxxx>smallRNA(fl3)      <xx                                                              xxxxxxxxxxxxxxxxxx>smallRNA(se3)   <xxx                                                              xxxxxxxxxxxxxxxxx>smallRNA(se3)    <xxx                                                             xxxxxxxxxxxxxxxx>smallRNA(si3)      <xxx                                                             <xxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxx                                                             <---------ALFIN1------>ZmHOX2a(2)   <xxx                                                             xxxxxxxxxxxxxxxxxx>smallRNA(fl3)    ----                                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxx                                                         ------>ZmHOX2a(2) --------->AGP1        <xxx                                                       <---------ARR14(2)  <---------GLK1(2)    <xxxx                                                      xxxxxxxxxxxxxxxx>smallRNA(i)              <xxxx                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxx                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)               <xxxxx                                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                <xxxxx                                                   <xxxxxxxxxxxxxxxxxsmallRNA(fl3)             <xxxxx                                                  <---------ANAC58    <-----------HVH21       <xxxxxx                                                  <---------ANAC58  <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <---------ANAC46 ------>NtERF2              <xxxxxx                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                <xxxxxx                                                <xxxxxxxxxxxxxxxxsmallRNA(s)<------ZmHOX2a(2) <xxxxxx                                                <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)             <xxxxxxx                                               <xxxxxxxxxxxxxxxxsmallRNA(s)<---------ARR14(2)<xxxxxxx                       <----------ID1         --------->ALFIN1--------->TOE1(2)      ----------->HVH21                       ----------->GT1        <xxxxxxxxxxxxxxxsmallRNA(si3)--------->ARR14(3)<xxxxxxx                      --------->ZAT18         <xxxxxxxxxxxxxxxxsmallRNA(i) <-----------ARR10 <xxxxxxx         --------->ZAT18                      <xxxxxxxxxxxxxxxxsmallRNA(s)<---------CCA1(2)  <xxxxxxx       --------->PCF2------------------------>ANAC81--------->ALFIN1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   cgaagtccaggcccactaatcgagtgcgaaaaaacaaaaacaaatgcggtgagcgtggatcgaacacgcgaccttcagatcttcagtctgacgctctccc  23062500           --------->ANAC58           --------->ANAC46           --------->ANAC58          <---------LBD16   <---------At4g35610   --------->At4g35610  <xxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxsmallRNA(fl3) -------->RAV1(2) ------>ZAT2 <---------MYB52(1) -------ZAT2--------->LBD16 xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxsmallRNA(fl3)  --------->At4g35610 ----->MYB52(1)  *TSS  <---------HSFB2a(2) xxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(i2)             --------->AHL20(2) xxxxxxxxxxxxxxxxxsmallRNA(fl3)            <---------AHL20(2) xxxxxxxxxxxxxxxxxsmallRNA(se3)        <---------AHL20(2) xxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->AHL20(2) xxxxxxxxxxxxxxxxxsmallRNA(fl3)        <---------AHL20(1) xxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->AHL20(1)                                  --------->ICU4 xxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->YAB1                    --------->GLK1(2)    <---------ATHB12 xxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->AHL20(2)          --------->DAG2           ------------>CBF xxxxxxxxxxxxxxxxxsmallRNA(s2)   --------->YAB1              ---------->DOF2    <---------AHL20(2)   aactgagctatccccgctacttgttatcgaagctaaaataataaaataaatacaaatatttgtaaaagcgagaatttgtgattttttttggcaataagta  23062600  Previous    Next  AGI:  At3g62280.1    Description:  carboxylesterase. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G56670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40172.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 23060398    to: 23062127    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62285.1    Description:  pre-tRNA. tRNA-Phe (anticodon: GAA) Range:  from: 23062445    to: 23062517    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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