Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <--------HAHB4                                                               <---------ICU4                                                        --------->DEAR3(1)                                        <-----------HVH21     <---------ATHB12          <----------DOF2          <---------ZAT18    ------>NtERF2       <---------ALFIN1            <---------ZAT14   <---------ANAC58                ---------->DOF2      --------->ZAT14              --------->ZAT14   <---------RAP2.6(2)         --------->AtMYB61      <---------ZAT18              --------->ZAT18   <---------ANAC58           --------->MYB46(3)      <---------ZAT14       <----------DOF2          <---------ANAC46         --------->ANAC46      <------NtERF2         <---------DAG2        <---------MYB52(1)          <---------ALFIN1      --------->ZAT18      <---------DAG2       <---------MYB46(3)      <---------ALFIN1            -   ctataggctgcactttcacactctgagcacctttttgtgcagtttcagagccgttgcgccttccatcatttccttcactcccaccatcaaagaaaacaaa  23041700                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                <----               <---------AHL20(2)                                                           ---------               --------->AHL20(2)                                                      <---------ICU4            <--------ATHB1                                                             --------->YAB1            <---------ICU4                                                             --------->ATHB12            --------->ATHB51                                                           <--------HAHB4            <---------AHL20(2)                                  <------MYB46(1)       <---------YAB1            --------->AHL20(2)                  <-----------GT1 <------MYB83          --------->ICU4           --------->ICU4           --------->At5g28300        --------->MYB59        <---------ATHB12         --------->YAB1    <---------YAB1    <---------ICU4 --------->ATHB12        --------->YAB1--- -------->At4g35610     --------->ICU4--------->MYB52(1) <---------GLK1(2)          <---------ICU4---   ttagcagagattaataatttaagaacatgatgagagacagtaactgaaaattacctccagattgtttggtcatattgtgacctccataatcattagctcc  23041800             --------->ANAC46             --------->ANAC58          <---------REM1(2)        <---------ICU4     --------->YAB1    <---------ATHB12                           <---------ARR14(2) ------>ANAC58      ------->GAMYB              ------->TEIL ------>ANAC46     --------->MYB46(3)          --------->ARR14(2) ----->LBD16 --------->ANAC58 <---------At4g35610 -------RAV1(2)   <---------At4g35610         <---------CCA1(2) >At4g35610 <---------LBD16   --------->At4g35610                                   --------->YAB1 ------>AtLEC2    --------->At4g35610  ------->TEIL                             <------ZmHOX2a(1) ------>ANAC58   ----------->RAV1(1)  <---------GLK1(2)                       <---------TOE2(3)   aggcaaatcatcttcacggcaacagccaaaacagctcattgaatctctgtatctgtagcattcaatttcgaaataacattgaggaataagaaaacacaga  23041900                                                     --------->ANAC58                                                     --------->ANAC46                                                --------->ARR14(2)                            --------->DAG2      <---------ARR14(2)                 --------->ANAC46               --------->GLK1(2)               --------->ANAC46        --------->ATHB12         --------->TOE1(2)               --------->ANAC58       <---------YAB1 --------->ANAC58                          ------               --------->ANAC58   <----------DOF2   <---------LBD16                        --------->MYB46(3)             <---------ALFIN1   --------->ZAT18 <-----------ARR10  <---------YAB1      <---------MYB52(2)         <-----------HVH21 ---------->DOF2      <---------------AtSPL3               --------->MYB52(1)   gagaaacccctagtcacacccaaaactcgtaaagcgcgttatcatttgagaatctacggaaactaagctacgattacaaatcagagcaaacgaacaaact  23042000                    --------->MYB52(1)                 --------->MYB52(1)                   <---------ATHB51                   --------->TOE1(2)                   <---------AHL20(2)                <---------MYB52(2)                 --------->YAB1          ------>ZmHOX2a(2)          <---------ARR14(2)      --------->ZAT6     --------->MYB46(3)          --------->GLK1(2)  --------->HSFC1(2)    --------->MYB52(1)          --------->ARR14(2) <---------HSFC1(2)    ------>MYB46(1)         <---------ARR14(1) --------->GLK1(2)      ------>MYB83 --->TOE1(2)  --------->LBD16--------->At4g35610 --------->AtMYB61   acgaaggaagcgaatccgaaaataatggagaagcttacactgatccaaaaaccaaacgaacgagagagagagagagagagagagagagagagagagagag  23042100                                ============================HOX2a_HOX2a                                ------>ZmHOX2a(2)                         <----------DOF2                               <------ZmHOX2a(2)                          <---------DAG2                               --------->CCA1(2)                        ------>MYB83                               =============================HOX2a_HOX2a ------>MYB46(1)                              <---------AGP1                           <---------ALFIN1    <---------ZAT14                              <-----------ARR10                      --------->TCP15(2)    <---------ZAT18                              <---------ARR11(3)                    <---------TCP20 <---------ZAT14                              --------->AGP1                        --------->PCF2  --------->ZAT14                              --------->ARR11(3)                    <---------TCP15(1)   --------->ZAT14                              *TSS    <---------GLK1(1)         --------->ANAC46   --------->LBD16                              --------->ARR14(2)          --------->GLK1(1)       <---------LBD16                              <---------ARR14(2)          <---------GLK1(1)--------->ZAT14 --------->ZAT14                      <---------ARR14(2)             <------ZmHOX2a(1)--------->MYB46(3) <---------ZAT14   agagagagagagagagagagagaggtttcgaagatctaagaaatcggtgaagagaggaagaaatccaagggacccactttagtccctggactgtgctctc  23042200                                      --------->ATHB12                                     --------->ICU4                                     <---------YAB1                                   <---------ICU4                                   --------->ATHB51                                   <--------HAHB4                                   <--------ATHB1                                   --------->YAB1                              ------------>CBF                              --------->LBD16                             --------->ANAC58                             --------->RAP2.6(2)                             --------->TOE2(3)                             --------->ANAC58                             ------->GAMYB                             --------->ANAC46                                            <---------AHL20(1)                        ------>ZmHOX2a(1)                                                --------->AHL20(2)                       <---------ANAC55(2)              --------->MYB59                  --------->AHL20(1)                       --------->ANAC55(2)          --------->ATHB12                     <---------AHL20(2)                       --------->TOE2(3)    <---------PCF2  <---------ANAC46      ----------->GT1                       --------->TOE1(3)  <---------ZAT18   ----------->GT1   --------->YAB1                <---------DOF5.7(2)--------->ATHB12--------->AHL20(1)        <---------YAB1 <--------               <---------WRKY45   <---------ATHB51 --------->AHL20(2)      <---------------AGL15               <---------WRKY12   --------->ICU4   <---------AHL20(2)      ==========================               <---------WRKY38(1)<---------ATHB12 <---------AHL20(1)---------->DOF2--------->AHL20(2)          ---------->DOF2   --------->MYB46(3)<---------MYB59     --------->YAB1<---------YAB1<------   tctaatttgacttaaagtcaacgttccttaaccgcaataattagtgggcctaattaattgggtcgtaaaaataaagcctattataagtaaatttattatc  23042300                                                          <---------ARR11(1)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                          <---------ICU4                 <---------CCA1(2)                       <---------AHL20(2)              --------->ANAC55(2)          <----------ID1                      --------->AHL20(2)      --------->YAB1                        ------->GAMYB                  <---------AHL20(2)      --------->AHL20(2)                      <------------------                  --------->AHL20(2)      --------->AHL20(1)                      >>>>>>>>>MYB98                 <---------YAB1 <----------DOF2        <---------ANAC55(2)       --------->MYB52(1) <-----------RAV1(2)  <---------AHL20(2)  <---------AHL20(2)                <---------ATHB12 -YAB1         <--------HAHB4  <---------ANAC58        <---------ANAC58--------------->AGL15--------- ======================================================================================MADS_MADS -----GT1     --------->ICU4   <---------ANAC58        <---------ANAC58<---------------AGL15---------   ggcccagtcgggttcgattattaattaaatatggcttttgtgaattaattagaaaatgcgtatcgttgcaattcttcaatgagtaacggacaaaccctaa  23042400                                                                                --------->ANAC58                                      <---------MYB52(2)                        --------->ANAC58                               --------->DREB2C(2)                         <----------ID1                               --------->RAP2.6(2)                       ============================                              --------->MYB46(3)                         ---------->DOF2                            --------->ARR14(2)                          <---------AHL20(2)              <-----------HVH21--------->DEAR3(1)                   ----------->TBP             <---------MYB46(3)------->GAMYB                        --------->AHL20(2)        ---------->DOF2     <---------ARR14(2)--------->DAG2       --------->AHL20(1)               -      ---------->DOF2  <-----------------------TaNAC69(2)          <---------AHL20(1)           <---- -----TaNAC69(2)      --------->CCA1(2)      ---------->DOF2      --------->AHL20(2)   --------->ZAT14 >TOE2(3) ------------>MYB.PH3(1)   --------->MYB52(1)          --------->AHL20(2)     --------->ZAT18 >TOE1(3) ------------>AtMYB77--------->DEAR3(2)  --------->RAP2.6(2) ----------->TBP  <---------ZAT14   cctctgtaaaaagagcggttagagaaacgagaaccgccaaacgaacaaaaagtcgcaacctttcaaaaatatatataaagacaaggaagagcactgtttt  23042500        <---------ALFIN1      *TSS<---------ALFIN1      ----------->RAV1(1)   --------->bZIP60(1)   <---------O2   <---------bZIP60(1)   --------->O2   --------->ANAC46   ==============================================bZIP_DOF                       --------->ZAT14   --------->ANAC55(1)                                   <---------TOE2(3)      <---------ZAT18   <---------TGA1a                                      --------->YAB1        <---------At4g35610   --------->TGA1a                                  --------->ATHB12         <---------ANAC46   --------->ANAC58                                 <---------ICU4         --------->ZAT14   --------->ANAC58                                --------->ICU4          <---------ZAT14 <---------ALFIN1                     <----------DOF2--------->TOE2(3)     --------->ZAT18 ============bZIP_DOF             <---------MYB52(1)--------->YAB1 <-----------RAV1(2) ---------->HVH21         --------->LBD16          <---------ATHB12<---------LBD16    <---------ICU4 -------GT1               ------>ZmHOX2a(1)       <---------ARR11(3)  <------ZmHOX2a(1)          <---   ccctcacgccacacacattattctcttcctgaatccattacttttactccaaaatcattaacaatggactcaggaagtgcagtggacatcatttcgacgc  23042600  Previous    Next  AGI:  At3g62220.1    Description:  serine/threonine protein kinase, putative. similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G47060.1); similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G47060.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40193.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 23040075    to: 23042130    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62230.1    Description:  F-box family protein. Identical to F-box protein At3g62230 [Arabidopsis Thaliana] (GB:Q9M1Q1;GB:Q56ZK0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G54820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39496.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 23042506    to: 23044103    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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