Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <---------ANAC58                                                                              <---------ANAC58                                                        --------->AtLEC2 ----------->GT1                                                 <---------------AGL15  ------->MYC3         <-----------GT1                     <----------DOF2            <-------MYC3  <---------MYB46(3)   <---------YAB1   <----------DOF2       <-----------GT1              <---------ANAC46     <--------   caattactattttactacttgactttcccattttcaattgtttttttctttctaattcatgaaaaaactatcaacgtgtaacttgcattgggtcatctta  22996800         --------->ALFIN1        --------->LBD16       <---------ANAC58       <---------ANAC46                                    ---------->ID1               <-------TEIL       <---------TGA1a                                   <------MYB46(1)                --------->ZAT18       <---------ANAC58                                  <------MYB83                   --------->ZAT14       --------->TGA1a                                  --------->MYB59                 <---------ZAT14       --------->O2                                <---------AHL20(2)               <---------------AtSPL8       <---------O2        --------->TOE2(3)       --------->AHL20(1)            --------->YAB1    --------->PCF5 <-----------GT1                 <---------AHL20(1)       --------->AHL20(2)   <-----------HVH21       --------->TOE1(3)       --------->AHL20(2)      <---------WOX13(1)  <---------ATERF1(1)    <---------YAB1           <---------AHL20(2)    <---------AHL20(2)  <---------DEAR3(2) --------->ANAC55(2)          --------->AHL20(2)    --------->AHL20(2) -At4g35610----------->HVH21------>ZmHOX2a(1)   --------->YAB1 <----------DOF2   ----------->GT1  ---   tggccggtcccgtgggacgttttacttatccttaagaactaagtttttaaaaataaatttggtcgctttctagtttaattgaatagtaagtacactgatt  22996900                                                                                           --------->ARR14(2)                                                                                           --------->ARR11(3)                                                                                  <---------WRKY18(1)                                                                                 --------->WRKY12                                                                                 --------->WRKY38(1)                                                                                 --------->WRKY45                                                                                 ----------->HVH21                  <---------YAB1                                                --------->DOF5.7(2)                --------->YAB1                                       <---------LBD16       <---------ARR14(2)               <---------YAB1  --------------->AtSPL8               --------->MYB52(1)     <---------ARR11(3)              --------->AHL20(2)                    --------->ARR14(2)        <---------ANAC46<------            <---------YAB1     --------------->AtSPL3     ----------->GT1  ----------->HVH21 ------>ZmHOX2a(2)            --------->ICU4     <---------------AtSPL8    ---------->ID1   --------->DEAR3(2)<------ZmHOX2a(2)           --------->TOE2(3)   <---------TOE2(3)    <---------ARR14(2) --------->LBD16 --------->LBD16      --------->AHL20(2) <--------P<-------TEIL<---------MYB46(3)  --------->AtMYB61  --------->TOE1(2) -------->GT1<---------ICU4    --------->MYB59<---------AtMYB61   --------->MYB46(3)  <---------LBD16   ttgtaaaataaaacattattataagaggttgtttaggtacattatttgatggtggatttgttgttaaaaccaccggagcgacgttgaccctgggatcttt  22997000                                                            <---------MYB59                                     <---------ZAT18       ----------------->AGL1                                     --------->ZAT14      ------>NtERF2                                     --------->ZAT18    <------NtERF2---------->DOF2                                     <---------ZAT14    --------->LBD16                           ---------->DOF2             <---------ATERF1(1)           <---------ZAT18     <-----------GT1      <---------WRKY45            --------->ATERF1(1)  ---------->DOF2     <----- ----DOF2                 <---------WRKY38(1)  <---------AHL20(2)  <---------YAB1    --------->ZAT14   tgagttttgaccagtctcgttttgagagtcaaagcctagtacactctaattaatgggccgggcctaattttgaaagtcaaagcctagtactctctagtta  22997100                                                                                               <-----                       <-----------TGA1              --------->ANAC46                        <-------                       <-----------HVH21             --------->ANAC58                   <---------O2                      --------->ANAC58               --------->ANAC58               --------->LBD16                      --------->ANAC46             --------->MYB52(1)              --------->ANAC46           --------->ARR14(2)                      *TSS   <------NtERF2       <---------ARR11(3)         <------NtERF2--------->ANAC58         <------ZmHOX2a(1)              --------->ARR11(3) <--- ----AHL20(2) --------->TOE2(3)               <----------ID1            <---------HSFB2a(2)  <-------   atgggcctggccgaattcttaaaaacgtcatacagtgctaaatttcataggacaaacggcagagcatgtcgaatcgagaacatctccgagacttggctta  22997200        <---------ARR14(2)        <---------ARR14(3)           --------->GLK1(1)            <---------ETT(2)        --------->ARR11(3)        <------NtERF2                   --------->ETT(2)        <---------ARR11(3)        <<<<<<<<<<E2Fb            --------->GLK1(2)        --------->ARR14(3)       --------->LBD16           <---------GLK1(2)        --------->ARR14(2)       ------>NtERF2             --------->ARR14(2)        <-----------ARR10       <---------ANAC46          <------ZmHOX2a(1)    ------>NtERF2              <---------LBD16          <---------TOE2(2)                         ---   --------->DEAR3(1)         --------->LBD16           <---------TOE1(2)                        <--- ----CCA1(2) <---------ANAC46<---------DEAR3(1)   --------->ARR14(2)                 <---------ANAC58 --ANAC58 ------>ZmHOX2a(2)  <---------RAP2.6(2)  <---------GLK1(2)    --------->GLK1(2)         <--- ------CCA1(2)              --------->SPL7        <---------ARR14(2)   <---------YAB1<---------ANAC46 --ANAC58<------ZmHOX2a(2)  <---------LBD16 <----------DOF2<---------ARR14(2)        <---------ANAC58   tctctccgacgatcttcgtataaaacttagtccggcgggaaatcgactttcaaattcgcaggattctgtcgatattcttgtatagttgcgagtctacaag  22997300                                                                           <------ZmHOX2a(1)                                                                  <---------ZAT2                                                                  <---------At4g35610                                                                  --------->At4g35610               <                                                              ------>ZmHOX2a(1)                     -                                                            ======================HOX2a_HOX2a    ----                                                            ------>ZmHOX2a(2)                    <---                                                          --------->ARR11(3)                    <----                                                          --------->ARR14(2)                    -----      <-----------GT1                                     <---------ARR14(2)                    <----  <<<<<<<<<TBF1          ---------->ID1                   ------->TEIL----------->HVH21     <-------- ------>GLK1(2)         <-----------GT1 --------->At4g35610 ----------->RAV1(2)     --------->ANAC46< ------GLK1(2)        <---------ICU4    ----------->RAV1(2)=======================HOX2a_HOX2a <------ ------ARR11(3)  <---------MYB52(1)     <---------At4g35610<------ZmHOX2a(2)----------->GT1 ---------   attcttcttcaccatctctgttaatttttccctaattctttcatctgagtgaaggaaatggatcctgaagctgtgaaggagtttatacgaagggaagttc  22997400               <---------DEAR3(1)               --------->ALFIN1               <---------AtMYB61 ---------ARR14(2) -------->ARR14(2) ----->HSFB2a(2)    <------NtERF2 ------HSFB2a(2)<---------MYB46(3)                  <---------At4g35610 -------------AGL1<---------ANAC46                  --------->At4g35610 ------------>AGL1<---------DEAR3(1)              <---------WRKY12 -------------AGL2--------->ALFIN1              <-----------HVH21                                ---- -HSFB2a(1)  <---------ANAC46          <---------ANAC58                                  --------->ATHB12 ---------GLK1(2)--------->ATERF1(1)   <---------ANAC46                               <---------ANAC58 ---ARR14(2) <---------bZIP60(2)       <---------ANAC58                               <---------ANAC46 >HSFB2a(1) <---------AtMYB61    <-------TEIL <---------ZAT6                          <---------ANAC58   cagattgggacgatgaggtggtggcgatggctagattcaaggcgtttagtggtcagaggtccgattgggaacttaaatttcagttttggcgtgatttgat  22997500                      <--------P                            <----------DOF2           <-----------HVH21           ------>ZmHOX2a(1)   <---------ANAC58          --------->ANAC46           ------>ZmHOX2a(2)     <---------ANAC58        <---------ANAC58      --------->ATHB12       <---------WRKY38(1)        <---------ANAC58      <---------ICU4      ----------->GT1             --------->ICU4        <---------ANAC46     <---------YAB1   <---------ARR14(2)     <---------HSFC1(1)     --------->ARR14(2)<---------MYB46(3) <-----------------AGL1     --------->HSFB2a(2)           --  <---------TOE2(3)  <-------GAMYB --------->ARR11(3)<---------WRKY12>>>>>>>ZML2----------->GT1 <---- ----->YAB1<-----------TGA1  --------->ICU4   --------->ARR14(2)     <---------HSFB2a(2)    <------ZmHOX2a(1)   catcaaggtttcgcgtcagtttgggttgttcatcattgatcctgtccaggtctggtcaattgcttttggttctagatgaaattagtaactagtaggaaga  22997600                                                <---------ANAC58            <----------DOF2                                                <---------ANAC58         ------>NtERF2           --------->TOE2(3)                    <---------ANAC46     ----------->HVH21          <----          <---------ANAC46           ----------->GT1        <---------HSFB2a(2)               <------     --------->ANAC55(2)          ---------->DOF2 --------->ALFIN1<------ZmHOX2a(1)    <---------TOE2(3)     <---------ANAC55(2)        <---------HSFB2a(2)        ------>ZmHOX2a(2)<---------DAG2 <--------- ------->ICU4        <---------ZAT18--------->DAG2<------NtERF2<------ZmHOX2a(1)      --------->YAB1 -----ARR14(2)--------->ATHB12  --------->HSFB2a(2)        ==============HOX2a_HOX2a --------->ICU4   actgattatgtaacgttgatttgttcacttgtttctaaaaggtgaagaaggcgtggtttgatcgaggaggaatgacgcctttatgcattgatgatgttgt  22997700  Previous    Next  AGI:  At3g62080.1    Description:  SNF7 family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69261.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 22997151    to: 22999752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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