Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->YAB1                           --------->CCA1(2)                           <------ZmHOX2a(2)     --------->MYB55(2)   --------->ARR14(2)     <---------MYB46(3)   <---------ARR11(3)                                 --------->YAB1 -->MYB46(1)              <---------ARR14(2)                           <-------GAMYB -->MYB83                 --------->ARR11(3)                          <------MYB83 ---->ANAC58              --------->AGP1                              <------MYB46(1)        -------- ---->ANAC58          ---------->DOF2           --------->ZAT14       <---------MYB46(3)   <---------MYB52(2) ---->ANAC46 <---------GLK1(2)   --------->ANAC46                   <--------P    ------->TEIL   gccatggtggttccatattctttgtaaagatccaaacacaactttggaacttcactctcttcgattccgagttggttaagcatgaactctgcaaataacg  22987200                                               <----------ID1                                          <---------ANAC55(2)                                     <---------ICU4                                     --------->YAB1                                     -------->HAHB4                                     --------->ATHB12                                    --------->ICU4                                    <---------ATHB12                                    <---------YAB1                                   <---------TOE2(3)                                <---------MYB52(1)                                --------->DOF5.7(2)         --------->CCA1(2)     --------->At5g28300     --------->ARR11(3)      ----------->GT1          <-------GAMYB ---------->DOF2                    <---------ANAC46   --------->MYB52(1)          <---------RAP2.6(3)  --------->ANAC58            <---------ANAC58  ---------->DOF2             <---------MYB46(3)    --------->ANAC58            <---------ANAC58   -- ->MYB52(1)        ----------->GT1<---------DOF5.7(2) --------->YAB1       <----------DOF2         --   aaaacaaagggatacaaaattcagttatatggccgttaatgattaagtaaagacaagcatcttgaaatgttaagtctcttttccttggatgttgtttcga  22987300                                                           --------->CCA1(2)                                                    --------->MYB46(3)                                            <---------ARR11(3)                                            --------->ARR14(2)                                     --                                            <---------ARR11(1)                         --------->AHL20(1)                              ---------->DOF2     ----------->RAV1(1)                  <---------AHL20(2)              <---------At4g35610  --------->ARR14(2)----------->RAV1(1)               --------->AHL20(2) ------->ANAC58          ----------->GT1    <---------ARR14(2)             <----------DOF2  --------- ------->ANAC58      ---------->DOF2       <---------CCA1(2)        <---------AHL20(2)--------->AHL20(2)   caagctaagttgattccgatgctcaaagggtataaagtatcgtccatatctgcaacaacagataagagttttaattcctttacaaaaaaaaaattgcaca  22987400                     <------MYB83                                                                ----                     <------MYB46(1)                                                             ----                   <---------WOX13(1)                                           --------->ARR14(2)      <---------TOE2(3)                                                  <---------At4g35610     ----      <---------YAB1 ----------->GT1                     --------->MYB46(3)     <---------ARR14(2)  - --------->GT1   --------->ATHB12                  ---------->DOF2       --------->At4g35610     <--- >ZAT18         <---------YAB1                 <-----------GT1          --------->MYB59     <--------   agggaaataagattgaagatgattggtttatagtttatatgtgtattatttaccaaagaacaaacactcgtagttagctccaaatccatccattttacga  22987500                                                                                                  <--             <---------HSFC1(2)                             ---------->DOF2                       <--             --------->HSFC1(2)                           *TSS                                    <--             --------->At4g35610                          --------->YAB1                          <--             <---------At4g35610                         <---------YAB1                          ---- --------->MYB52(1)             --------->AHL20(2)     --------->YAB1                            <--- ----->GLK1(2)              <---------AHL20(2)         <---------ICU4                            <--- --->TEIL   --------->GLK1(2) <---------TOE2(3)        -------->HAHB4                            ---- ----->ARR14(2) <---------At4g35610                   <---------ATHB51                          <---- -------->TOE1(2)  --------->MYB52(1)                 --------->ICU4                           <----- ------ARR14(2) --------->At4g35610 --------->YAB1  --------->YAB1               ------------>CBF<--- ---GT1 >>>>>>>>>TBF1       --------->AHL20(2)  ----------->GT1          <---------At4g35610<------ZmHOX2a(1)   atccaacgaagaagaagctgctaacgagaattaatgaattatagacgggaagattaataatgaaaagagagagagagcttatgaacaatgtgaaggagtt  22987600      <---------AHL20(2)    <-----------TBP -------ANAC46 -----GAMYB -------ANAC58 -------ANAC58 ----->MYB55(2) ------MYB46(3) ---MYB83                         <---------ARR14(2)        <------MYB83                            < ----->MYB52(2)        ---------->DOF2    --------->MYB59   ----------->GT1                      <--- -----AtMYB61------------>CBF     --------->ARR14(2)        <------MYB46(1)                   ------- ---P --------->AHL20(2) --------->DAG2 <<<<<<<<<MYB98  <---------ARR14(2)       --------->ARR11(3) - ---MYB46(1)--------->ANAC46--------->ALFIN1<------ZmHOX2a(1)          <----------DOF2        -------   ggttgtatttatatacacaattcaaaaaaggtagtggattttgttaggacacatagaatatttggttactagtctttatctaatatcgttttgaaacata  22987700                                                                          --------->TOE2(3)                                                                         <-------TEIL                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)     <---------YAB1            <---------TOE2(3)                       <---------ARR14(2)<---------ANAC58  <---------YAB1               <---------TOE1(3)                <----------DOF2          <---------ANAC46 ---------bZIP60(1)      >>>>>>>>>>ABI3             <----------DOF2    --------->ARR14(2)<---------ANAC58 ------YAB1              >>>>>>>>>>FUS3        <-----------GT1 <---------MYB52(1)        <---------RAP2.6(2) -->TOE1(2)           <---------ANAC58      <---------ICU4    --------->LBD16           <---------LBD16 -------->bZIP60(1)   <---------AtLEC2     <---------YAB1   <---------LBD16  <---------ICU4 -->TOE2(2)           <---------ANAC58   --------->YAB1    --------->MYB52(1)--------->ATHB51   <<<<<   tgatatcattctagttttttttttgcatgcattagggtttgtatcataaataccctttaacttccggtttttggatccataattttctattgcggctaga  22987800                                                                      <-------GAMYB                                                                     --------->ALFIN1                                                                     <-----------RAV1(1)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                 <------MYB83                                                                 <------MYB46(1)                                                                --------->MYB111(2)                                                                <---------MYB46(3)                                                                --------->MYB46(2)                                                                <---------DEAR3(1)                                                                --------->MYB111(1)                 <---------ANAC55(2)                           <--------P             --------->ARR11(3)                                <---------MYB55(1)          <---------ICU4                                     <------MYB46(1)          --------->AHL20(2)                                 <------MYB83          --------->YAB1                    --------->ANAC58--------->MYB46(2)       --------->YAB1                       --------->ANAC46--------->MYB111(1) --------->STY1(2)                          --------->ANAC58--------->MYB59                       --- <---------STY1(2)               --------->ATHB12         <---------MYB52(1)              --------->DAG2 <<ZML2<---------ICU4           <---------ATHB12    ------->TEIL<---------AtMYB61        ---------->DOF2   actagctaataataatatcacgtttaatgcataaatcatttgtcccaagaaatgaaactagttaggttggtgtgttgctctaaaattcacaaaaagcacc  22987900                                                                   --------->YAB1                                                                   <---------ICU4                                                                  --------->ICU4                                     --------->ATHB12             <---------YAB1                                    <---------YAB1             --------->ICU4                      --------->AHL20(2)                       <---------YAB1                      <---------AHL20(2)                     <---------ICU4                         -                      <---------AHL20(1)                     --------->YAB1                        --           --------------->AtSPL8   --------->ICU4  <---------ANAC58                              <--           <---------------AtSPL8 --------->YAB1    <---------ANAC58      --------->ANAC46        <--         --------->ATHB12     ---------->DOF2       <---------O2--------->YAB1                <------    <---------ALFIN1  --------->AHL20(1)<---------MYB46(3)  <------ZmHOX2a(2)        ------->TEIL<--- ------->TEIL        --------->AHL20(2)<---------WOX13(1)  --------->ARR11(3)  <-----------RAV1(1)<-- ------>AtLEC2       <---------AHL20(2)<---------YAB1 ----------->HVH21  --------->MYB46(3)<---------At4g35610   atgcatccacttgattgtacaaaataaattcagaaagcatgattgttgaaggtgacttgacgatcatgataattatccaccatgttgcatctatgctgat  22988000                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                         --------->At4g35610                                                                                         <---------bZIP60(2)                                                  ============================================bZIP_DOF                                                  <----------DOF2                     ----------->HVH21                                            <---------YAB1                          --------->TGA1a                                           <-----------GT1                          <---------TGA1a ----->NtERF2                             <-----------GT1                           --------->O2 ------->LBD16                          <---------AHL20(2)                          <---------O2   <- -------ANAC58                        <---------YAB1 --------->AHL20(2)      <----------DOF2------>MYB46(1) -------ANAC46                      --------->AHL20(2)                    <---------ALFIN1  ------>MYB83 ---At4g35610                       <---------AHL20(2)      <----------DOF2  =================bZIP_DOF ------LBD16 <---------ANAC46      --------->AHL20(2)<---------AHL20(2) <---------ALFIN1 <---------At4g35610 -------ANAC58 --------->ALFIN1<---------YAB1--------->YAB1 ==================================bZIP_DOF   gcgggcaataagatgaggtgtttagcatctactatcatttatttttatcattcttttaatttctttgtcatttcccacactttccgtcgtgacctgccat  22988100  Previous    Next  AGI:  At3g62040.1    Description:  hydrolase. similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G59490.1); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.1); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to hypothetical protein OsI_026055 [Oryza sativa (indica cultivar-group)] (GB:EAZ04823.1); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-n Range:  from: 22986251    to: 22987558    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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