Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->bZIP60(2)                                --------->ATHB51                             --------->ANAC46                            --------->LBD16                                  --------->ANAC58                           <---------ANAC58                                  ----------->HVH21                           <---------ANAC46                                  --------->ANAC58                           <---------ANAC58                               --------->ZAT18                          <---------LBD16                            ------>ZmHOX2a(1)                  <-----------GT1                             <---------ARR11(3)                   --                <----------DOF2<---------YAB1 <----------ID1  --------->ARR11(3)               <-----   atccaatagtcttcttctctttactatttccgtataattgcaaacaaaaaaacaaatctctatagatattcctaagcccacgacattttcatacatttct  22962000          <---------ATHB12         ------>MYB83         ------>MYB46(1)         -------->P                                              --------->AHL20(2)   <---------ARR14(2)                                       --------->AHL20(2)             <---------KAN4(1)   --------->ARR14(2)                                 <------MYB83                         --------->KAN4(1)  <---------CCA1(2)                                   <------MYB46(1)                 ----------->GT1 ---->ZmHOX2a(1)    <----------DOF2                   ----------->GT1        <-----------GT1 ------GT1--------->MYB46(3)     <---------ICU4     <--------P   <---------AHL20(2)<-----------RAV1(1)   cctcatatcccaaccatttagcctttatattctcatcaatacaatttttgaagggttggcaaaaaaataaaatcgcatataactactgttgtaatattcc  22962100                                                                 <---------YAB1                                    <-----------GT1            <---------ICU4                             <---------AHL20(1)               --------->ICU4                             --------->AHL20(1)             --------->YAB1                             --------->ARR11(3)   <---------AHL20(2)                        --------->AHL20(2)       --------->AHL20(1)             ----------->GT1 <---------AHL20(2)  <---------AHL20(1)   --------->DAG2     <---------TOE2(3)         <---------AHL20(2) ---------->DOF2      ----------->GT1   <----------DOF2 <-----------GT1       <----------DOF2   atcaaaaggtagagatggtatattaagttaatattttgtttcctttctatatatattttcactgattatgactatatatactttagtcatcaaaaatttc  22962200                                                     <---------ARR11(3)                                                     <---------AHL20(1)                                                     --------->ARR11(3)                                               --------->YAB1                                            --------->WOX13(1)                                        ----------->GT1        ---------->DOF2    --------->AHL20(2)                  <---------ANAC46<---------AHL20(2) <---------AHL20(2)           <---------AHL20(2)                 <-------TEIL  --------->ARR11(3)    --------->AHL20(1)    <----------ID1              <---------MYB46(3)  --------->AHL20(2) --------->AHL20(2) --------->DAG2             --------->ALFIN1  <---------ARR11(3)   --------->AHL20(2) ---------->DOF2         ------   tcttccatcttgagagtggttcgtatacaagtagattttattttgtaaatcaaaatatattagggaaaagaagaaaagggccaaataaatgtaaatgaat  22962300                                                                                  <---------ALFIN1                                                                                 <---------ALFIN1                                                                                 <------NtERF2                                                                                --------->DEAR3(1)                                                                               --------->PCF2                                                                               <---------TCP15(1)                                                                               --------->ATERF1(1)         ----------->GT1               <------ZmHOX2a(1)                      <---------PCF5  --------------->AGL15               <----------ID1                          --------->PCF5  <---------------AGL15             --------->DAG2                            --------->PCF2 ----------------->AGL1            ---------->DOF2                            <---------PCF2 ----------------->AGL2     <------MYB46(1)                                   --------->TCP20 <-----------------AGL2     <------MYB83                                      --------->TCP15(1) ----------------->AGL3     ----------->GT1    <---------At4g35610 <---------GLK1(2)    <---------ALFIN1 ->TEIL----------->GT1   <------ZmHOX2a(1)     --------->At4g35610 <------------CBF   <-----------HVH21   atgtccatatagagaaaaatgaaacgaggatggtagaaaaaggacaagaagctcacatgaacagaaccagattgttcatgggcccccctctcacctctct  22962400                 <---------ARR14(2)                 <---------ARR11(3)                 --------->ARR14(2)                 --------->ARR11(3)                                               <---------ANAC46                 <---------ARR11(1)   <---------ANAC55(2)                         <---------ANAC58         <---------ETT(2) --------->WOX13(1)                ------>ZmHOX2a(1)  ------>ZmHOX2a(1)        --------->HSFB2a(2)  --------->TOE2(3)    <------------------------ANAC81 <---------ANAC58      ------>ZmHOX2a(1) ------------>CBF   <---------At4g35610                 ====================== <----------DOF2<---------CCA1(2)     *TSS --------->At4g35610    ------>ZmHOX2a(1)             <----   cttctttcctctcgacccatatctctatcaatcttatattacatgagctctctctctctctccttctccttctctcttctccttccttgttcttagagat  22962500                --------------->AGL15                <---------------AGL15               <-----------------AGL1               ----------------->AGL1        --------->HSFB2a(2)               ==============================================MADS_MADS                         <-----               <-----------------AG          <---------HSFB2a(2)                               ------              ---------->ID1                 <---------------AGL15                <---------ANAC58             <-----------GT1                 --------------->AGL15                <---------ANAC58   ------>ZmHOX2a(1)<---------ANAC46        ----------------->AGL2              --------->GLK1(2)  <---------MYB59<----------DOF2 <---------ARR11(3)                             <---------ARR14(2) ------>ZmHOX2a(2)  <---------ANAC58        ----------------->AGL3     ---------->DOF2    <---------ATHB12 =======HOX2a_HOX2a <---------ANAC58        ========================================================= -----WOX13(1)<-----------GT1    --------->ARR11(3)            ---------->DOF2 <---------GLK1(2)   tgatcctaacttgtttttcctttcttggaattgaagagcttcttgttccataaacagtagagagagaaagcttcaaagagagaatcgtgctaatcagtga  22962600                                       --------->WOX13(1)                                     --------->WRKY18(1)  --------->ANAC46             ------>MYB83          <------MYB46(1)     --------->ZAT14  ----------->GT1                 --------->MYB59     --------->AtMYB61 --------->MYB59     --------->ICU4<------MYB83    <---------ALFIN1 --------->MYB46(2)--------------->AGL15           --------->AtMYB61                         <------- ----ZAT14   ------>MYB46(1) <---------YAB1       --------->MYB46(3)               <---------TOE2(3) --->ZAT14  <---------ALFIN1 <---------AHL20(2) --------->ANAC46                   <---------TOE1(3)- ==================================MADS_MADS   --------->MYB46(3)          --------->HSFB2a(2)<------   agttaggcaaaaacccacttgccatttttgtataattaggtcaatctcatccaccaccatactcaattctcttccttctgaaattagggttttttttatc  22962700                                                                                    ------>ZmHOX2a(2)                                                                                   --------->CCA1(2)                                                                                   <------ZmHOX2a(2)                                                                                  --------->ARR14(2)                                                                                  --------->ARR11(3)                                                                                  <---------AGP1                                                                                  <---------ARR11(3)                           <---------TOE2(3)                                      --------->AGP1                     --------------->AGL15                                        <---------ARR14(2)                     <---------------AGL15                              --------->ARR14(3)                    ----------------->AG                                <---------ARR14(3)                    <-----------------AGL1                              --------->ARR11(3)                ---------->ARF1                                         --------->GLK1(2)            <---------ANAC58                                            <---------ARR11(3) ----------   ------>ZmHOX2a(1)----------------->AGL3                       ----------->GT1 <---------GLK1(1) ----GT1    <---------ANAC58----------->GT1                    ===========================HOX2a_HOX2a ----->ZmHOX2a(1)   ----------------->AGL2                     ============================HOX2a_HOX2a -----GT1<----------DOF2 ---------->DOF2                       <------ZmHOX2a(1) --------->GLK1(1)   tcctcctctctctttcttgtctaccaaaaaaggttttatcgaattactctcaaatcgtatggtgaggaagtcaaaatcttgagagatctgagattgtaag  22962800                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                         ----------->HVH21                                                                                        --------->DEAR3(2)                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                             <---------YAB1                            ------>MYB83                                    <---------HSFC1(2)                  =============================               ---------->DOF2      --------->HSFC1(2)                  ---------->DOF2------>MYB46(1)    ------->TEIL                    <---------HSFB2a(1)        ------->MYC3       --------->ZAT6 ->GT1       --------->ARR11(3)     --------->HSFB2a(1)        <-------MYC3  ----------->GT1<--------   aagatgaatcaagaagataaagagaagcctattgaagaagcttcttcatcaatggagagagaacacatgttcgacaaagtagtaacaccaagcgacgttg  22962900  Previous    Next  AGI:  At3g61970.1    Description:  NGA2 (NGATHA2); transcription factor. similar to NGA1 (NGATHA1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24343.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 22962438    to: 22963826    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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