Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                -----                                                                                              -------                                                                                              <------                                                                                              -------                                                   <----------DOF2                           --------                                             --------->WOX13(1)                             -------->P                                           <---------YAB1 <------NtERF2            --------->HSFC1(2)                                       <---------ANAC58  ------>NtERF2             <---------HSFC1(2)                                   --------->HSFB2a(1)  --------->ATERF1(2)        <---------HSFB2a(1)         <---------GLK1(2)         <---------HSFB2a(1)  <---------ATERF1(2)        --------->HSFB2a(1) ----------DOF2                    --------->HSFC1(2)--------->WRKY12         <------ZmHOX2a(2) ----- ----ARR11(3)        <----------DOF2   <---------ANAC58--------->RAP2.6(3)   --------->ARR11(3) ----- ---GLK1(1) <---------ARR11(3)     <---------HSFC1(2)----------->HVH21       <---------ARR11(3) <----   ctctttaagaagattatctcttactttagggctaagaagtttcttatcaatctctttgacggcaacttctaaaccagaagatcgatgcttcgctaaccac  22955900   --------->LBD16  --------->DEAR3(1) ------->AtMYB61 ------->DEAR3(1) --------ALFIN1                                                      --------->HSFB2a(2) ------>MYB46(3)                                                     <---------HSFB2a(2) ---->ANAC58                                                ------>NtERF2  <---------AHL20(2) >GAMYB <---------MYB52(2)                                  <---------ATERF1(1) ---ALFIN1                                     --------->ANAC46      --------->ANAC46               < -->AtMYB61                          <---------ANAC46      --------->DEAR3(1)                     <-- ->MYB46(3)------->TEIL  <---------LBD16      --------->MYB46(3)    <---------LBD16         <-------- ---->ANAC58      <---------MYB59    <---------ANAC58     --------->DEAR3(2)          <-----------GT1 ---->ANAC46     --------->ANAC58    <---------ANAC58 <---------ANAC58  <---------GLK1(2)  <--------- -----ALFIN1     --------->ANAC58   <-------TEIL      <---------ANAC58--------->LBD16----------->HVH21   accaccgcaaacgaaccagacccaattctcgggccaagtgcgtagtcacccacaagtcgtgccgactccatccggaattttttggttttgacccgttaga  22956000                     --------->MYB46(3)           <---------ANAC58       <---------ANAC58       --------------------->WRI1       <---------ANAC58      ------>ZmHOX2a(2)     <------ZmHOX2a(2) >>>>>>>>>>>>>>>>>LFY    <---------ARR14(2)------->GAMYB    --------->ARR14(2)--------->TOE2(3)  <---------ICU4                                       <------ ---------LBD16     -------->P           <-----------GT1                    <----------DOF2   ------- --------DOF2       ------->TEIL      <---------ICU4                        <---------DAG2   <------- -MYB52(1) <---------ANAC58          --------->AHL20(2)               --------->YAB1        <-------- --HVH21   <---------ANAC46          <---------AHL20(2)       ----------->GT1       ---------->ID1  -   ctttcggatccttgcttgaatcaacctccattgtttctattaattactactactcaaactcacagagaaaaatcaaaactttttttgtttttttttacgg  22956100            --------->MYB52(1)           ------->GAMYB          --------->MYB46(3)                                                                     <--- ---ANAC55(2)                                                                              <---------AHL20(2) -->ANAC55(2)             <---------TOE2(3)                                               <---------AHL20(2) --LBD16  <---------MYB52(2) ---------->DOF2                                  <---------DAG2--------- ---GT1 --------->MYB52(1)<---------TOE1(3)                                   <----------DOF2  ------ --------->DOF2          <---------DOF5.7(2)                      ---------->DOF2         --------->AHL20(2)   attaaaggaacaacgaactgtttttgttaacgaaaggagacgatttgagttttatatatgttatacagtaaagctatcgacttttttttttttttaataa  22956200            --------->ALFIN1       <---------ANAC58      <---------ANAC46              <------------CBF        <---------ANAC46           <---------ANAC58      <---------ANAC58          --------->HSFB2a(2)        <---------ANAC58   <------MYB83                  <---------ANAC58     <---------HSFB2a(1) ------TOE2(3)       <---------TOE2(3)               <---------ANAC58         --------->HSFB2a(1) >YAB1  <---------ANAC58--------->CCA1(2)            <---------ANAC58--------->HSFB2a(2) ---->DOF2--------->ALFIN1 <------MYB46(1)  ---------->DOF2    *TSS  <---------HSFB2a(2)   <---------TOE2(3)   aggtttttttgtgtgtggagattgagatttggttatagcttatgagcaaagagtttcttacttgtagtagtccagaagaaaccttctgaaattgacgttt  22956300                            <------ZmHOX2a(1)                           --------->ANAC58                           --------->ANAC58                          <---------TOE2(2)                       --------->ANAC46                       --------->ANAC58                       --------->ANAC58         <---------DAG2                    <---------ARR14(2)       <-----------GT1                ----------->GT1               ----------->GT1            <---------ICU4               <---------AHL20(2)              --------->ANAC58   <---------ARR11(3)                   <---------AHL20(1)              --------->ANAC58   --------->ARR11(3)                   <---------AHL20(2)          ---          --------->HSFB2a(2)   --------->RVE1(1)                     --------->AHL20(2)         <---          <---------HSFB2a(2)   --------->CCA1(1)<----------DOF2   --------->WOX13(1)       <--------  ------------>CBF  --------->ARR14(2)  <----------DOF2      ------>ZmHOX2a(1)      --------->YAB1<--   tgaatccaatttccacaaggaaaatacgcaggaaatatctctctttattaccttttaaaattcctacttcaattaattttgttatatcaaaattttacaa  22956400                                                <---------MYB52(1) ------>YAB1                                  <---------ZAT6                                     ---- ------ATHB12                    --------->AHL20(2)     <---------TOE2(3)                        <--- ---GT1                         --------->AHL20(2)--------->MYB52(2)                  --------->CCA1(2) -------ICU4    --------->TOE2(3)<---------AHL20(2)    ---------->DOF2     ---------->DOF2      <----   tcatcaaatttagcaaaacattagctatttttcatttatttctatgaactgttagtttaaagttcaactatagctcttaaagtcgaagataaacattttc  22956500                        <-----------RAV1(1)                       <---------TOE2(3)                      --------->YAB1                      <---------ICU4                     --------->ICU4                 <---------AHL20(2)                            --------->YAB1   <---------AHL20(2)                 --------->AHL20(1)                            -------->HAHB4  xxxxxxxxxxxxxxxx>smallRNA(i)                 --------->AHL20(2)                           <---------YAB1  <---------RVE1(1)                 <---------AHL20(1)                         --------->YAB1    <---------CCA1(1)           <----------DOF2                                 <---------YAB1    <---------ARR11(3)   <---------TOE2(3)<---------AHL20(2)           <---------------AtSPL8      <---------GLK1(2)  --------->YAB1--------->YAB1        <---------YAB1   <---------DAG2        --------->ARR11(3) ----------->AGL15 --------->YAB1   <-----------GT1    <----------DOF2     <---------TOE2(3)      --- ------------AGL15<---------YAB1 --------->YAB1  --------------->AtSPL8    <---------YAB1     <------ -------------AGL1<---------AHL20(2)--------->YAB1   ------->TEIL   ----------->GT1           <------   ccattaatgaagtctttaatataataatgttggaaaaataacaattgaatttatgtactttataataatacggtattaagatttttttttttttttaagg  22956600                                                     --------->AHL20(2)                                                    <---------ICU4                                                   --------->ICU4                                                --------->AHL20(2)                                                <---------YAB1                                      --------->ANAC58                      --------->CCA1(2)        --------->AHL20(1)                     --------->ARR11(3)        <---------AHL20(1)                     <---------ARR11(3)        --------->AHL20(2)                <---------WRKY18(1)       <---------ALFIN1               --------->ANAC55(1)        --------->ARR11(3)     --------->ATHB12 -------->GT1    ---------->DOF2      --------->ANAC58           <---------ARR11(3)<---------YAB1 ---TOE1(3)--------->TOE1(3)          --------->ANAC46<---------YAB1        <---------At5g28300 ---TOE2(3)--------->TOE2(3)  --------->AHL20(2)<---------AHL20(2)         <-----------GT1<---------WOX13(1)   tagaaaatcacacccttaaaaaagatataaaaaaaaatacacgttagaatataatttttatagtcgatatctatgttttaccatgaccattgattgtttg  22956700                                                          <---------AHL20(2)       <-----------GT1                                             <----------DOF2                       --------->YAB1 ---                                            <---------ANAC58                    --------->YAB1    <--                                      <---------TOE2(3)   --------->AHL20(2)    <---------ICU4  -----                            <---------ANAC58<---------ANAC46             ------->TEIL    --------->ARR11(3)                  --------->ETT(2)   <-----------GT1     --------->AHL20(2)  --------->YAB1 <--------       <----------DOF2      <---------ANAC58<---------ANAC58          <---------REM1(1)  <---------ARR11(3)   aacttgaagctttgatatagtcgacctgtttcttacatataacgttgctttaatgtcaatttaaaaacgtagatgtaactaataataacaagatttattc  22956800  Previous    Next  AGI:  At3g61960.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G37840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24339.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 22952748    to: 22956263    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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