Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------->ATHB1 --------ATHB1 -------->YAB1 -------->ATHB51                   --------->GLK1(1) -------->ATHB12                   --------->CCA1(2)     --------->TOE2(3) ---------ICU4                    --------->ARR11(3)   ------->TEIL --------YAB1                     <---------ARR11(3)<---------ANAC55(2)                   --------->ATHB12 ------->ICU4                 ---------->DOF2       --------->ANAC55(2)                  <---------YAB1 --------ATHB12             --------->ARR11(3)   --------->ICU4                          --------->ICU4 --------ATHB51          <---------TOE2(3)     --------->YAB1                    <----------DOF2 ----->WOX13(1)         ---------->DOF2        <---------ICU4               <----------DOF2 ----YAB1              --------->AHL20(2)      <--------HAHB4               <---------DAG2<---------ICU4 -YAB1                 <---------AHL20(2)      -------->ATHB1              <---------ANAC58 >ICU4              --------->WOX13(1)        --------->ICU4               <---------ANAC58   aattattgtttctatcactgttcaattaaagataaagatatcgatagaatcattatgtacctcagagaccagagattgcttttctttcttcatgatttca  22925900                                                                                                    <                                                                                                    -                                                                                                    =                                            <----------DOF2                                         -                  <---------YAB1  ----------->GT1       <---------ANAC46                     ========     --------->ANAC58             <---------ZAT6        <---------ANAC58                     --------     --------->ANAC58<---------WOX13(1)<-----------GT1  <---------ANAC58               <-----------GT1   aattgtgaagccaaattgttgtaattggctctaagagtgttatactctttctcaagttgcttagttttccatcgagccctcttgttttgaaaccatatag  22926000                                                                                                 ----                                       <---------HSFC1(2)                                        ====                                       --------->HSFC1(2)                                      <-----         <---------ANAC58              --------->HSFB2a(1)   --------->O2                      <-----         <---------ANAC58         --------->TOE1(3)          --------->TGA1a               <---------ANAC58         <-------GAMYB            --------->TOE2(3)          <---------O2                  <---------ANAC46     <---------ANAC58            ----------->RAV1(2)    --------->ANAC58              <---------O2     <---------ANAC58           =======================================MYC_MYB        --------->O2 ---------O2<---------At4g35610 -------->P              --------->ANAC58              --------->ANAC55(2) -------->TGA1a------>NtERF2  <---------MYB111(2)<---------DEAR3(1)                   =============== ================MYC_MYB     <---------STY1(2)  <---------LBD16                       --------->TGA1a -------->O2--------->At4g35610 --------->MYB52(1) <---------At4g35610                <---------TGA1a =========bZIP_DOF   --------->ZAT2   ------->TEIL --------->At4g35610           --------->At4g35610 -->DOF2<---------MYB46(3)   --------->STY1(2)  ------>ZmHOX2a(1)           --------->YAB1 <---------ANAC58   ccacttgtcttggttgcagccctagctctctagctacctgaaccttcttcctcggctcaagcctcgtctcagactcaaatataagctcaagtgacttgat  22926100                                                           --------->ANAC58    ------>ZmHOX2a(1)                                      --------->ANAC58 -->ZmHOX2a(2)  <----------DOF2                            --------->AtLEC2                     ----- ==========HOX2a_HOX2a                                  --------->WRKY18(1)                     <---- ----ARR11(3)--------------->AGL15                     <-----------HVH21                       ------ ----AGP1   <-----------------AG                   --------->YAB1                              ------ ==========================bZIP_DOF           <---------YAB1                           --------->At4g35610   ctgttcctcgctaaacctcttttggttattgctcttcttcatcttcttcttattcatggtcatgccactactaatctcgctgaaacagcagttgaaaaaa  22926200                                    <---------ANAC58                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                       <---------AGP1                       <---------ARR14(2)                       --------->ARR14(2)                       <---------ARR14(3)                       --------->ARR14(3)                       <---------ARR11(3)                                                          <-  ==============================HOX2a_HOX2a                                    <----------DOF2  -----  =============================HOX2a_HOX2a                                 ---------->ID1       -----  ------>ZmHOX2a(1)    --------->ARR11(3)                            --------->ATHB12           <---- ---->ARR11(3)         --------->AGP1                                --------->ATHB51          <----- -----ARR11(3)        <---------ARR14(1)                             <---------AHL20(2)     <-------- --->RVE1(1)          <---------CCA1(2)     <---------YAB1           --------->AHL20(2) <----------DOF2 --->CCA1(1)     <-----------GT1    <---------ANAC58                --------->ICU4   <-----------GT1*TSS   tctccttcttccatggttttcaccagatcttgtaagtttcttgattttgattaagagagaaggttttggaattatttgtttcttttttttctttctttct  22926300                                                                                          <---------YAB1                        <------NtERF2                                                   -------------            <-----------------AGL2                                                 <---------YAB1 --------GLK1(2)        <---------At4g35610                                       <---------AHL20(1) ---->HSFB2a(2)       <---------RAP2.6(2)                            <---------LBD16    <------------ ---->HSFC1(1)   <------------CBF     --------->ALFIN1               <------NtERF2<---------AHL20(2) -----HSFB2a(2)--------->ARR11(3)<---------AHL20(2)     <---------ANAC58  --------->GLK1(1) ----LBD16  <---------ANAC46 <-----------TBP <-----------GT1<---------ANAC46    <---------YAB1 --DOF2     <-----------------AGL1  <-----------RAV1(1) <---------ANAC58  <---------GLK1(1)   ggaatctctgagttgctgatattggccgcttatatataatgtgggagttactatgtgtgcttgtgtagggcctcggatttctattattttttatatttgg  22926400                                                                   ------->PIF5                --------->ANAC58                             <---------ARR14(2)                --------->ANAC58                    <---------ARR14(2)     --------->AHL20(2)      --      <---------ICU4                                --------->ICU4 <-------PIF5                    --     <---------YAB1                         --------->ARR11(3)   <---------LBD16                   --     --------->ICU4                         <---------ARR11(3)  <---------ALFIN1                 <--- -->AGL15     ------->GAMYB   --------->ATHB12 --------->AtLEC2--------->MYB46(3)                <--- ---AGL15    --------->MYB46(3)         ---------->DOF2      --------->ARR14(2) <-------TEIL<--------   aaatttcattattcaaccaagacaaaataaactcattgaataaaaagacctgcaaatattgtggaaccacgggctaaaaatatacgtccaaaatttgtgg  22926500                                                                               --------->AHL20(1)    --------->ANAC58                                                           <---------ICU4  <-----    --------->ANAC58                                                           <---------AHL20(1) <---------REM1(2)                                                             --------->ARR11(3)   - ------->ANAC58                                                          --------->YAB1        ------ --------->HVH21                                                        <---------ZAT6   <----------DOF2 ------->ANAC58                                                --------->At4g35610  --------->YAB1<-- ------ANAC58                                                --------->YAB1    <---------ARR11(3)---- ------ANAC58                                        --------->ZAT18--------->MYB46(3)   <---------DAG2 ---RAV1(1)           <----------DOF2    <---------AHL20(2) <---------ATHB12--------->YAB1    <------   ctcgacacgaattggctcatgtctctttcagtttaagtcgtatttcatttagatgtgaactaatcatctaactactgataatattttcatactttttttc  22926600                                                                <---------ANAC58                                                                <---------ANAC58                                                                <-------GAMYB                                                               <---------MYB46(3)   --------->YAB1                                            --------->ALFIN1   --------->AHL20(2)                                      <---------bZIP60(2)  <---------YAB1                                           <---------O2  --------->YAB1      -------- ------GT1           <----------DOF2                       <---------ANAC46       --------->ZAT18  -- -------->YAB1     --------->At4g35610                     <---------ANAC58   --------->TOE1(2)   --- ---->ID1          <---------At4g35610                     <---------ANAC58--------->MYB52(1)<------- --------DOF2<---------YAB1                    <---------ANAC55(2)      <---------ATHB12  <----------DOF2 ----->TOE2(3) <-----------GT1   <---------AtLEC2     --------->YAB1    <<<<<<<<<ARR2    <---------ANAC58 -----GT1 --------->ICU4         <---------ANAC46   <---------WOX13(1)--------->WOX13(1) <---------ANAC58   ctttataatataagtattatcagcttttatatgtttcatggaagtgatcaagtgaatgataacgtgggttgacaatcaaacgggcgaactggctttggtt  22926700         <-----------GT1      --------->WOX13(1)     <---------AHL20(2)     --------->AHL20(2)    <---------ATHB12                <---------MYB52(1)    ---------->DOF2  --------->WOX13(1)           <-----------GT1  ------>ZmHOX2a(1) --->GT1 --------->YAB1       <-----------GT1  --------->TOE1(2) ------->TOE2(3)          <----------DOF2   <---------ARR14(2)        --------->YAB1 ------>REM1(1)           <---------DAG2    <---------MYB52(1)       <---------YAB1                 < --MYB46(3)            <-----------GT1    <---------MYB46(3)   ----------->GT1                 ------   acatcaattaatcaccatacatattttactttttaacagtttggccgttcctaagaaaaatgaagcagtttataatgaaacaaaaaaaaaaactcgatta  22926800  Previous    Next  AGI:  At3g61890.1    Description:  ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12); transcription factor. Identical to Homeobox-leucine zipper protein ATHB-12 (ATHB-12) [Arabidopsis Thaliana] (GB:Q9M276;GB:O64893); similar to ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24296.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-asso Range:  from: 22925129    to: 22926300    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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