Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC58              --------->WOX13(1)             ---------->DOF2            --------->WRKY18(1)           <--------ZAP1           <-----------HVH21         <---------TOE1(2)        ------>ZmHOX2a(1)       --------->TOE2(2)       --------->TOE1(2)                <---------YAB1    --------->GLK1(2)                 --------->YAB1    --------->ARR14(2)               --------->ICU4    <---------ARR14(2)             ---------->DOF2                                   ----------->RAV1(1)   <---------GLK1(2)         --------->TOE1(3)                          --------->HSFB2a(2) --------->LBD16             --------->TOE1(2)                          <---------HSFB2a(2) -------->HSFB2a(2)          --------->TOE2(3)                      <---------ARR14(2)           <--- ---------HSFB2a(2)          --------->TOE2(2)                --------->ARR14(2)  --------->ANAC58 -- ----->ARR14(2)--------->AtLEC2 --------->ANAC58  -------->P  <---------ARR14(2)  --------->ANAC58--- ------ARR14(2)--------->ANAC58 --------->ANAC58 --------->WOX13(1) --------->ARR14(2)         <-----   atccagaatcctaggtcaagcagaaactaaacctaagcaaagatgatttatcaaccagaagacgaattcgaattcgagacggacaaacaacaaaatttca  22913000                                                                                          <---------ANAC58                                                                                   ----------->HVH21                                                                                 <------ZmHOX2a(2)                                                                                 --------->CCA1(2)                                                                                --------->AGP1                                                                                <---------ARR11(3)                                                                                --------->ARR14(2)                                              <---------WRKY38(1)               <---------ARR14(2) <---------ANAC46                             <---------ETT(2)      <---------MYB55(2)    <---------ANAC46 ------LBD16                 --------->GLK1(1)--------->ETT(2)      --------->MYB46(3)    <---------ANAC58 ------->LBD16        <-----------GT1       <-----------HVH21  --------->HSFB2a(2)------>ZmHOX2a(2) ------>DEAR3(1)    <---------DAG2   <---------ZAT18       <---------ANAC58  --------->HSFB2a(2) ------GT1          <----------DOF2  --------->ZAT18       <---------ANAC58  <---------HSFB2a(2)<----   ccggcgtataacttagaagacactttaccagatttcatgtccactcggtcgactctcccatacttgtcgaacaaccgttccagatccgactggcgagttt  22913100                                                           <------ZmHOX2a(2)                                                         ------->GAMYB                                                        --------->MYB46(3)                                            --------->ANAC58                                     --------->TOE2(3)--------->MYB52(1)                           <-              <------NtERF2     <----------DOF2      =============HOX2a_HOX2a                      --             ------>NtERF2 <------NtERF2    --------->ANAC58    <---------ATHB12          -----------   --------->ANAC46--------->ZAT6    --------->YAB1  ------>ZmHOX2a(1)      ----------->GT1  -------- ---TEIL    --------->DEAR3(1) <---------ICU4   --------->GLK1(1)         --------->ICU4 ----------->GT1   catactcgaaattgccgacgaacactggcctcatctttatcttaattcgcaattcctaacgatccaataactcgaaattagtaacatgtaagggataaaa  22913200                           --------->MYB52(1)                          -------->HAHB4                          <---------ICU4                          --------->ATHB51                       --------->ANAC58                         <---------YAB1                          ----------->GT1                    -                         --------->ICU4                          --------->ANAC58            ------>NtERF2 --------TOE2(3)       --------->YAB1                            <----------ID1           ------>NtERF2 ------->MYB59        <---------YAB1    <-----------GT1        --------->MYB52(1)        --------->DEAR3(1) >GT1               --------->YAB1  --------->DAG2  --------->MYB52(1)                 ------>NtERF2< ->AHL20(2)       ----------->GT1  ---------->DOF2--------->MYB46(3)                  --------->DEAR3(1)   taaggtatatggacatgagcaagtataattatcggagaaaagttacctctgaacaatcggagaagaaacgaaaaacaaaccctagacgacgacgacgact  22913300                                            --------->ANAC58                            <--------P---------->DOF2  <---------ICU4 *TSS           <---------ICU4                            <---------WOX13(1)         --------->ATHB12--------->GLK1(1)                     --------->ARR14(2)     --------->ANAC46   <---------HSFB2a(1)  --------->ICU4              ---------->DOF2 <---------WRKY18(1)  ----------------->AGL1           <---------YAB1  < -------->ZAT14      <---------ARR14(2)     --------->ANAC58  ----------->ARR10   --------->YAB1    - ---------ZAT18--------->DAG2--------->WRKY12<-----------HVH21<-------TEIL     --------->YAB1   <----   actacgctcatcgaagaaaagcagagcctggttgacttaaaaaagcccgtcataccatcatgggtacattcggaaattcaaaaatcataatgggccttct  22913400                                                                    --------->AHL20(2)                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)          ----------->RAV1(1)                                    --------->AHL20(1)       --------->PCF2                                           <---------AHL20(2)      <-----------TCP11(1)                                      --------->AHL20(2) ---------YAB1                      --------->ARR11(3)    --------->HSFB2a(2)   --------->AHL20(2)  < ---------->TBP           <---------ALFIN1        <----------DOF2<---------AHL20(1)                <- ------DOF2------------>CBF         <---------ARR11(3) <---------YAB1   <-----------GT1            <-   ttataaataggcccacaataagttagccccataccgaagaactcgttggagtcttttcttatagaattaaatttatacatgtttatatacagacccattt  22913500                                                                --------->MYB52(1)                                                              <-------TEIL                                                       --------->ALFIN1                                                      <-------MYC2                                                      ------->MYC2                                                      <-------MYC4                                                      ------->MYC3                                                      <-------MYC3                                                      ------->MYC4                                                      ------->PIF5                                                      <-------PIF5              ---------->DOF2                        ======================MYC_MYB              =================================================bZIP_DOF          >>>>>>>>>TBF1                              <---------ANAC55(2)   <---------DEAR3(2)                                <---------TGA1a  <---------DEAR3(1)                                 <---------ANAC46  <---------At1g77200                                --------->TGA1a <---------MYB52(1)                                  --------->O2     <---------GLK1(1)           <-- -----------HVH21      <---------TOE2(3)             <---------O2     --------->GLK1(1)          <--- --------ANAC58       ---------->DOF2           ----------->HVH21  ------->GAMYB              <------ZmHOX2a(2) --------ANAC58       =========================================bZIP_DOF      <---------CCA1(2)=======   tccgtcggtgaagaagaaaagaattaaagtttatgtaagtgtccagttttctgacacgtggagattcaacggagttctcttatctgttttggttcgatca  22913600         <---------TOE2(3)   <---------RAP2.6(2)                                                        ------>NtERF2  <---------LBD16                                                            <---------ETT(2) <-----------GT1                                                --------->GLK1(2)  <---------ALFIN1 - -------ICU4 *TSS                     <----------DOF2          <---------GLK1(2) <---------ALFIN1  <- ------YAB1<------ZmHOX2a(1)    --------->ZAT14                --------->ARR14(2)--------->AtMYB61<-- =================HOX2a_HOX2a<<<<<<<<<TBF1      <---------GLK1(2)   <---------ANAC46 --------->ANAC46   tttttgcggtttaggatgtctctattgtttcttcttcactctttttgccacaatctctgttccaagaatcgcgagtatggcgaccacacttcattgtctc  22913700                                                                   ------>MYB46(1)                                                                   ------>MYB83                                                                 --------->AtMYB61                                                                 <---------MYB111(1)   --------->ANAC58              ---------->DOF2             --------->MYB46(3)   --------->ANAC46     <---------ICU4                     --------->YAB1   --------->ANAC58     --------->YAB1                    --------->MYB46(3)                        - <---------ALFIN1     --------->ANAC58                    <---------ATHB12               --------->LBD16 -------->ZAT14       --------->ANAC58--------->TOE2(3)  ------>MYB83 --------->YAB1   <---------LBD16 --------ALFIN1  ------>ZmHOX2a(1)    --------->TOE1(3)  ------>MYB46(1)      ----------->GT1     --- -------REM1(2) --------------------->WRI1              --------->WOX13(1)    --------->AtLEC2<------   tccacactccatcttcttcctcgcactcatcaccctaaaaccctaaactctctcaaaccaatcaccaccaaatcacaaccatgtaaaaccccagaaatac  22913800                                                                                            ---------                                                                                        --------->YAB1                              --------->YAB1                                      --------->ANAC58                             <---------ATHB12                                     --------->ANAC58                       --------->TOE2(3)                        <----------DOF2 <-----------RAV1(2) <---------ALFIN1  <---------At4g35610                        <---------ANAC58----------->RAV1(1) -------->ZAT14    <---------ZAT2  ------>ZmHOX2a(1)          <---------ANAC58<---------ALFIN1 ------>ANAC46     --------->At4g35610              <---------WRKY38(1)      --------->MYB46(3)   <-- -----GT1  ------->GAMYB------>ZmHOX2a(1)         <-----------HVH21     ------>ZmHOX2a(1)  ----------   cctccactcccaacgctcttcagctccttaaatcatcctctctccctctcgcagtcatcgcattgcctttcttcctcgacccacaggtaatcaaaaagtt  22913900  Previous    Next  AGI:  At3g61860.1    Description:  ATRSP31 (ARGININE/SERINE-RICH SPLICING FACTOR 31); RNA binding. Identical to Arginine/serine-rich-splicing factor RSP31 (RSP31) [Arabidopsis Thaliana] (GB:P92964;GB:Q944A4;GB:Q9M278); similar to arginine/serine-rich splicing factor, putative [Arabidopsis thaliana] (TAIR:AT2G46610.1); similar to Os04g0118900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052061.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14416.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 22911043    to: 22913370    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61870.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95718.1) Range:  from: 22913613    to: 22915045    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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