Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <-----------HVH21                  --------->O2                  <---------ANAC46                  --------->TGA1a                  --------->bZIP60(2)                  <---------O2                                           <---------AHL20(2)                  =============================bZIP_DOF                 <---------AHL20(1)                  <---------TGA1a                                       --------->AHL20(1)             --------->ANAC46                                           --------->ARR11(3)           =================bZIP_DOF                                    --------->AHL20(2)           ---------->DOF2                                          <---------AHL20(2)   <---------GLK1(1)----------->HVH21                              --------->AHL20(2) ----------->CBF ------>NtERF2                                 <---------ZAT18                     -- ------->ANAC46  <------NtERF2<---------MYB52(1)        <---------YAB1  <---------AHL20(2)         <- ------->ANAC58  --------->LBD16           ------------>CBF<-----------GT1            <----------DOF2 ------->ANAC58 --------->DEAR3(1)  <----------DOF2  <---------AHL20(2) <---------ARR11(3)      -----   taagcaattcccaaaacgccgcgtgacccttcgtttgcctttgaatacaatttgttttattttagcgcatttaatatatttgagtttcctttttagcgat  22898500                                                                                  --------->MYB55(2)                                                 ----------->GT1                  <---------MYB46(3)                                         <---------AHL20(2)                      --------->ALFIN1 <---------YAB1                         <---------AHL20(2)                     <-----------RAV1(1) ----------->GT1                        --------->AHL20(2)            ------->GAMYB ------->bZIP60(1)                  <---------AHL20(2)              --------->At4g35610 --------bZIP60(1)                  --------->AHL20(2)              <---------At4g35610    ---------- ------>HVH21     ------------>CBF --------->AHL20(2)            <-------TEIL<---------At5g28300  ---   gacatgataaaacaaaaaacaacaattttagaaaacatttaattaaatgaatagaaaaatagggagattcaactgaagttactgtgggtggaaatgacag  22898600       <------ZmHOX2a(2)       --------->At4g35610      --------->ARR14(2)      <---------ARR14(2)      <-----------ARR10      --------->ARR11(3)      <---------AGP1      <---------ARR11(3)      --------->GLK1(2)     <---------GLK1(2)     <------ZmHOX2a(1)   --------->LBD16  <---------LBD16   ---------->DOF2                                  ----------->GT1   <---------AtLEC2 ->HVH21------>ZmHOX2a(2)                                     <------ZmHOX2a(1)       <-------TEIL ------>GLK1(1)--------->MYB52(1)    <---------YAB1    ---------->DOF2            ------->TEIL   gtctccaggatctgaactaagagaaagtctctctatattttgatatatagagagagataaagaaggagagagtgtgaatatatgtatgtgcatgatactg  22898700                                                                                                 ----                                         ------>ZmHOX2a(2)                                   --------                                        <------ZmHOX2a(2)                                   ---------                                   <---------At4g35610                                      ---------                                   <---------LBD16                                          <--------                                --------->At4g35610                                     --------->ANAC58                          <---------AtMYB61----------->GT1                              --------->ANAC46                        <----------DOF2--------->ARR14(2)             <---------MYB46(3)--------->ANAC55(1)                      --------->ZAT2<---------ANAC46                 <---------WOX13(1) <---------ANAC55(2)                      --------->At4g35610<---------LBD16             <---------YAB1     --------->ANAC58                   <---------At4g35610 <---------ARR14(2)         <---------YAB1        --------->ANAC55(2)              <---------TOE2(3) <---------At4g35610    <---------ANAC46  <---------REM1(1) <---------GLK1(2)            ---------->DOF2    --------->MYB52(2) --------->MYB52(1)<------------CBF   <---------LBD16   tgagacttcttcagtaaaggaagcagctttggtttgctgcggatcgggataaaaacggcgagaagtttgtgattgttgaagcaaaacaacacggaatctg  22898800                                                                   --------->MYB52(1)                                                                  <---------SPL7                                                                  ----------->HVH21                                                                  ----------->TGA1                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                --------->At4g35610                                                                *TSS <---------ANAC46                                                                <---------At4g35610                                                            <---------bZIP60(2)                                                            <---------ANAC46       ------------------------>ANAC81                      <---------ANAC58  ---------->DOF2                     <------ZmHOX2a(1)     <---------ANAC58 ------>DOF2                          =======================HOX2a_HOX2a ->At4g35610                          ======================HOX2a_HOX2a         --------->DAG2 >GLK1(2)                   <---------ARR11(3)           <---------MYB52(1)    --------->DAG2 >ARR14(2)                  --------->ARR11(3)        ------>ZmHOX2a(2)       ---------->DOF2 -ARR14(2)<----------ID1---------->DOF2              <------ZmHOX2a(2)----------->GT1   aaaggaaaggagaagacaaaaaaaaaaaaagattttaagaggaagagagagagagatcggtttcgtggctgacggaaaaaaaaaggggagagatttagtt  22898900                                                   <---------MYB52(1)                                                  <-------GAMYB                              --------->YAB1     --------->MYB52(2)                              <---------ICU4     <---------MYB46(3)                             <---------ATHB12   --------->SPL7                            --------->ANAC58   <---------MYB52(1)                       <-----------GT1                            --------->ANAC58  <-----------HVH21                       <-----------GT1                   <---------ANAC55(2)      --------->MYB46(3)                    <---------AHL20(2)                   <---------ANAC58         <------------AtMYB77            <----------DOF2                   --------->ANAC55(2)    --------->MYB52(1)               <---------ANAC58                   <---------ANAC58       <-----------GT1         ---------->DOF2<---------AHL20(2)                 <-----------GT1        <---------MYB59  <---------ANAC46  <---------ANAC58   ----------->RAV1(1)     --------->WOX13(1)------->GAMYB ------>ZmHOX2a(1)<---------DAG2     ------   ttatccaacagtgcctgaattacgttctgcaatcaatacggacataaccgtccgttgtgtcctgtttataaagttttgctttttttattttctccattga  22899000                                                                <---------TOE2(3)                                                             ----------->HVH21                                                           <---------ANAC46             <----------DOF2                                       <-------GAMYB   <---------At5g28300   <----------DOF2        <----------DOF2       <----------DOF2     <---------ZAT6<---------TOE1(3)    <---------AHL20(2)   <----------DOF2        <---------CCA1(2) --------->ZAT6--------->LBD16   <------------------------ANAC81 --->ATHB12           <---------ANAC46----------->GT1 <-----------GT1     <-----------GT1         ---   tgggtcttttctttcttctctctctcgtgtttctttcatggggttaagactagtgtttaccgcgtgaaggtttttttttctttctattttctttcatttc  22899100                                                                                       --------->TGA1a                                                                                       --------->O2                                                                                       ==============                                                                             <---------ARR14(2)                                                                           --------->HSFB2a(1)-------                                                                  <---------ICU4       <---------O2                                                                 <---------YAB1        ==============                                              <---------ANAC58 --------->YAB1<---------ARR11(3)                                              <---------ANAC46<---------YAB1 --------->ARR11(3)                                              <---------ANAC58--------->ICU4 --------->ARR14(2)   ---             <<<<<<<<<TBF1   --------->At4g35610     <---------REM1(1)<---------LBD16  <---------TGA1a   ------>ZmHOX2a(1)         <---------At4g35610  <---------ZAT6 --------->ICU4        <---------ANAC55(2) --->ZmHOX2a(1)              ----------->RAV1(2)  --------->ALFIN1--------->ATHB12 <-----------HVH21   ctctccttctacttcttcttctccagttctcatctgggttcttcaatggcgagtgttgaaggtgatgatgatttcggaagttcttcgtcaagtgagtagt  22899200 ========bZIP_DOF ---->GT1 <----------DOF2                                                              <----------DOF2 ========bZIP_DOF                                     <---------MYB52(1)     --------->YAB1 --------- ------->DOF2           ---------->ID1     --------->ZAT6       <-----------GT1      --------->At4g35610   aaaaggctgagactttagaaagttttgtttttttttttgtttctaacagtgactctgtttggggttttactctgtagaatcaaaatcagctttgtaaagt  22899300                                 --------->ZAT2                         --------->LBD16                       <---------LBD16    <---------AHL20(2)<---------LBD16  ---------->DOF2     <---------ALFIN1            ---------->DOF2 ->DOF2     <----------DOF2<----------ARF1     ----------->GT1<----------DOF2   <---------CCA1(2)   ttcgatttttttttctttcattttctcgggagacgagcttagaaagaaatagaaaaaaccccaactttcttatttttctcgtatagcttcaaagttcaca  22899400  Previous    Next  AGI:  At3g61830.1    Description:  ARF18 (AUXIN RESPONSE FACTOR 18); transcription factor. Identical to Auxin response factor 18 (ARF18) [Arabidopsis Thaliana] (GB:Q9C5W9;GB:Q9M355); similar to ARF11 (AUXIN RESPONSE FACTOR 11), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46530.3); similar to ARF11 (AUXIN RESPONSE FACTOR 11), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46530.1); similar to ARF11 (AUXIN RESPONSE FACTOR 11), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46530.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO14392.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69513.1); contains InterPro domain Transcriptio Range:  from: 22898864    to: 22902410    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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