Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                             --------->DEAR3(1)                               <------                                       --------->ARR14(2)                                     <------                                  <---------At4g35610       <---------ARR11(3)                ------>NtERF2                                  ------>NtERF2             --------->ARR11(3)               <-------                                  --------->At4g35610      <---------GLK1(1)                 <-------                                 --------->RRTF1(3)    --------->ALFIN1                      <-------                                 --------->RAP2.3(2) <---------ANAC46                        <-------                                 --------->RAP2.3(3) <---------ANAC58                       ---------                                 --------->DEAR3(1)  <---------ANAC58                      <---------RAP2.3(1)                                <------NtERF2<---------ATERF1(2)                         --------->SPL7                               <---------RAP2.3(1)  <-------TEIL                     <---------MYB46(3)                               ------>NtERF2 --------->ATERF1(2)                    <--------P<------             --------->At4g35610--------->ORA47(2)<---------SPL7                <---------LBD16<-----             <---------At4g35610--------->RAP2.3(1) --------->SPL7              --------->SPL7<------         <-----------HVH21     <---------RRTF1(1)<---------MYB46(3)          <---------ANAC58<-------      <---------ANAC46         <---------ATERF1(1)<------NtERF2              <---------ANAC58--------      <---------ANAC58        <---------DEAR3(1) <---------DEAR3(2)   <---------TOE1(2)--------->ARR11(1)      <---------ANAC58        --------->ANAC46  <---------DEAR3(1) <---------ANAC58<-------GAMYB----- <---------At4g35610         --------->ZAT18--------->DEAR3(2)     <---------ANAC58<---------MYB52(1) --------->At4g35610     --------->MYB52(1)--------->MYB52(1)  <----------DOF2<---------SPL7<--------   ctccgcttccttgtgagaggccagagataactgcgccgctaaatccaccggcggtacgtggagttcttttcgtagcatttcgtccggttgatacggcggc  22892200   ----------->GT1   <------MYB83   <------MYB46(1)                                                   <-----------HVH21 <---------ANAC46                                                   <---------ANAC58 --->ATERF1(1)                                                      <---------ANAC58 ---RAP2.3(1)                                                      <-------TEIL ---ERF1                                                        --------->GLK1(1)               ----- --RAP2.3(2)                                                    --------->At4g35610             <---- --RAP2.3(3)                                                    <---------GLK1(1)               <---- --DEAR3(1)                                                     <---------At4g35610             ----- --RRTF1(3)                                                    --------->ARR14(2)               ----- >ATERF1(1)                                                  --------->LBD16                    <---- ---ATERF1(1)                                              <---------LBD16                      ----- -NtERF2                                                  ------>NtERF2  <------NtERF2          <---- ---DEAR4(2)         <------NtERF2                      <-------TEIL<---------ANAC46           ------ --ANAC46           --------->LBD16                   <-----------HVH21<---------DEAR3(1)      <----- ->DEAR3(1)       <---------LBD16            <-------GAMYB<------NtERF2<---------ANAC46        ------ ---->DEAR3(1)   <---------ANAC46           <---------MYB46(3)<------NtERF2                    <----- -ABI4(1)     ----------->HVH21            <---------TOE2(2)--------->DEAR3(1)               <-------   gaggctggtaatagatttgacgcggagagagtctcgttggagacggaggttgaagaggtccgccggagatgcgtcggagaaggaagacagagcatccacg  22892300  <---------YAB1 -->PIF5 ---MYC3 ---MYC2 -->MYC4                                                                           --------->LBD16 -->MYC2                                                 <-------TEIL             <---------HSFB2a(2) ---PIF5                                                --------->ARR14(1)        <---------ANAC46 -->MYC3                                                --------->CCA1(2)         <---------ANAC55(2) ---MYC4                                                --------->GLK1(2)         <---------ANAC58 --->TGA1a                                             <---------GLK1(2)          --------->HSFB2a(2) ----TGA1a                --------->ZAT14              --------->ARR11(1)         <---------ANAC58 --->O2                   <---------ZAT18              <---------ARR14(2)        <---------LBD16 ----O2                   --------->ZAT18 <-------TEIL --------->ARR14(2)    --------->ALFIN1 --ALFIN1         <---------ZAT14   ---------->DOF2---------->DOF2           <-----------RAV1(1) ----   tgtgataaatggacagagagtgaagttgtggactcggataaagattcatcagttaaagattcggactcgggccatgagagtgttgcggaagaaggaagag  22892400                                                   --------->ANAC58                                                   --------->ANAC58                                                  --------->RAP2.6(3)               <------MYB83          --------->At4g35610                                      -------               <------MYB46(1)       ----------->GT1                                     <---------ANAC58              --------->MYB59       --------->ALFIN1                                     <---------ANAC58   <----------ID1            --------->At4g35610 --------->MYB52(1)                     <---------ZAT18 ----->ALFIN1 --------->MYB46(2)   <------ZmHOX2a(1)   ---------->DOF2               <----------DOF2   tgttgacgacaagagtttggtattgggaagaagcagaggaggtgaagaagagaacggcaaagacggagaaggcgagggtattcaagactttgcgctccat  22892500                                       ------>ZmHOX2a(2)                                     <---------ARR14(2)                                     ------->TEIL                                     <---------ARR11(3)                <---------ARR14(2)   --------->ARR11(3)                <---------ARR11(3)   --------->ARR14(2)                --------->ARR14(2)   <---------AGP1               ===============================HOX2a_HOX2a    --------->YAB1          <-----------HVH21      <---------ZAT14   ----------->GT1   <-----------GT1<---------CCA1(2)                               ---------->DOF2 -->ATHB12     <------ZmHOX2a(1)<---------O2       --------->ZAT14         ---------->DOF2       ----   tggaaatgaaaatatgaggattttaactattgtcacatggatcttatatagactatagtctgtctatctatctactcaaaagtatacaaaggcaaaatga  22892600                                                                                   <------------CBF                                                                                  --------->ATHB12                                       <-----------GT1                            -------->ATHB1                                       <---------ICU4                             --------->ATHB51                                       --------->MYB52(1)                        --------->ICU4                                      --------->ICU4                             <---------ATHB51                                 --------->ANAC55(2)                             --------->AHL20(2)                                 ----------->GT1                               ------>MYB46(1)                                 <---------ANAC55(2)                           ------>MYB83                              --------->ICU4                           --------->YAB1                            --------->YAB1                             <--------HAHB4    <----------DOF2                           <---------AHL20(2)                     <----------DOF2<---------AHL20(2)     *TSS                  --------->AHL20(2)           <----------DOF2<---------ICU4    <---------DAG2   <---------ANAC46      <----------DOF2             <-----------GT1  <---------YAB1  <-----------GT1 --->TEIL---------->DOF2 --------->TOE2(3)   <----------DOF2<----------DOF2  <---------MYB59 <-------   agctcgtgtgtgaaagcacatagtttactttaattatgtaataacgactttgttttttctttctttttctttatcattaccaaattattgactttattcc  22892700                                                            <---------ANAC58                        <                                                            <---------ANAC46                        <                                                           <---------MYB46(3)                     xxx                                                   <---------TOE2(3)                              xxx                                               --------->CCA1(2)                                 xxxx                                              --------->AHL20(1)   <---------DEAR3(1)            xxxx                                              <---------ARR11(3)----------->HVH21              <-----                 --------->MYB52(1)          <-----------TBP<---------ANAC58                 <-------        ----------->HVH21             <---------ANAC58  <------------CBF          xxxxxxxxxxxxxxxxxxx     ------>ZmHOX2a(1)                <---------ANAC46 --------->ATHB12           *TSS      xxxxxxxxx ----GT1----------->TGA1              <---------ANAC58<---------YAB1       <------------CBF xxxxxxxxx   ccatttcctactgacgaagtaatggagttctaattttgtagcttggaatatataagattattgggtgagacggtgcaaattggttccatggtctagtggt  22892800               <xxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ARR14(2)          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <<<<<<<<<<<<<<<<LFY ------ZmHOX2a(1)      -------->P                       --------->YAB1 xxxxxxxxxxxxxxx>smallRNA(le3)                      --------->AHL20(2) xxxxxxxxxxxxxxx>smallRNA(si3)                   <----------DOF2 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->TOE2(3)                  <---------DAG2 xxxxxxxxxxxx>smallRNA(s)       xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              --------->ZAT18 ------HVH21   --------->ARR14(2)            <---------ARR14(2)                <---------ZAT14 --ZAT6 xxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->ARR14(2)                <---------ZAT18 xxx>smallRNA(se3)  xxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->AHL20(2)          --------->ZAT14 xxxxxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     >>>>>>>>>>>>>>>>>LFY<---------YAB1 xxxxxxxxxx>smallRNA(se3)     xxxxxxxxxxxxxxxx>smallRNA(s)     <---------AHL20(2)  <----------DOF2   caggacattggactctgaatccagtaacccgagttcaagtctcggtggaacctttaaattagaatttttttgtttccattgtacacttttagtattcttg  22892900                                  <---------PCF2                                 <------NtERF2                            <------NtERF2--------->ANAC58                          <-----------RAV1(2)                         <------NtERF2   --------->ANAC46                         --------->ATERF1(1)                        ------>NtERF2    --------->ANAC58                 <---------AHL20(2)  <----------DOF2             <---------CCA1(2) --------->ALFIN1                                   --------->ZAT6    <----------DOF2    <---------RAP2.3(3)                          --------->ZAT18   ---------->DOF2   atgagactttagcccatattttttgggggcagggtggggcttcaagacatagccaaaaaatgtctaagaggccactgagaattatctctaaagcatttga  22893000                       <---------TOE2(3)                                                <---------ANAC58                      --------->YAB1                                                    <---------ANAC46                     <---------ATHB12    <---------RAP2.3(3)                            <---------ANAC58                 --------->MYB46(3)      <---------ZAT18                         <-----------HVH21                <-----------------AG     --------->ZAT18                  <---------ARR11(3)              <---------ATHB12        <-----------RAV1(1)                 --------->ARR11(3)        --------->ANAC58      >>>>>>>>>GATA-1      <---------ANAC46      <---------GLK1(1)        --------->ANAC58    ----------->GT1    <-------GAMYB             <---------CCA1(2)        --------->ANAC46 <------ZmHOX2a(1) <---------PCF2   ------->TEIL --------->GLK1(1)-----------   gttatgcaataagccaataaccaataaggatagataaactatgtgggctcgttgagtttatgtacttaaggcctgatatctcccttcatgggttgtaaaa  22893100  Previous    Next  AGI:  At3g61820.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G01300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64659.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 22890779    to: 22892605    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61825.1    Description:  pre-tRNA. tRNA-Gln (anticodon: CTG) Range:  from: 22892782    to: 22892853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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