Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------ZAT18                                                                        --------->ZAT18                                                                       <---------ANAC58                                                                       <---------ANAC58                                        <---------MYB46(3)      <---------TOE2(3)                                --------->TOE1(2)               <---------TOE1(3) <------ZmHOX2a(2)              --------->TOE2(2)            <---------MYB52(1)               ------- ---------ARR14(2)             ----------->RAV1(2)     --------->At4g35610            --------->TOE1(2) -------->ARR14(2)  ----------->GT1     ----------->GT1<---------At4g35610          --------->SPL7---   cggatcagaaattgttcaaataatgtgaaaaaaacctgagagtggttatgtctcatgagctccattagggtttgcgaactaagtcggacctccgaatcag  22887700                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                   <----------DOF2               ----                                       <---------WRKY38(1)         <---------DAG2                ----                                       <---------WRKY12        ---------->ID1                   -----                                 <---------LBD16             <---------ANAC58                   -----   <---------ZAT18            --------->HSFC1(2)     <---------At4g35610             <---------ARR11(3)   --------->ZAT18            <---------HSFB2a(1)    --------->At4g35610            <---------ATHB12- -->YAB1                      <---------HSFC1(2)  <---------At4g35610           ------->GAMYB  ------ ------->DOF2      ------>ZmHOX2a(2)  --------->WRKY18(1)    <---------ANAC58 -------->P<----------DOF2   aatagcgaacaatggatttgatcgccttgagaagcctcgggtcaacctcttgagcagttgatttcgtcgctttctctatcaacccaataactttccctcc  22887800    <---------CCA1(2)    <---------At4g35610 <---------MYB52(1) <------NtERF2 ---------RAP2.6(3) -----------TGA1 -----------HVH21 ------->DREB2C(2) ------->RRTF1(3) ------->RRTF1(2) ------->DEAR3(1)           --------->YAB1 ------->RAP2.6(2)         <---------ATHB12 ------->RAP2.3(3)       --------->WOX13(1) ------->RAP2.3(2)     <------NtERF2 ------>ERF1           ------------>CBF ------>RAP2.3(1)     --------->ANAC58 ------>RRTF1(1)      --------->LBD16              --------------------->WRI1 ------ATERF1(1)      --------->ANAC58 <---------GLK1(2) -->NtERF2            ------>NtERF2    <---------ARR11(3)                                          -- ----->LBD16         --------->ATERF1(2)           <----------DOF2                                 -- ---->ANAC46         <---------ATERF1(2)  <-----------GT1                                          <- ---->DEAR3(1)       --------->DEAR3(1)--------->ARR14(2)                                     <------ ----->NtERF2       <---------LBD16    --------->ARR11(3)                   ----------->TBP --------- --->SPL7         --------->DEAR3(1)   <---------ARR14(2)      --------->LBD16 ---------->DOF2-------   gccgtcatctcttccttccatcgccggcaatcagaaattcagattttcttctcctttctaatttccgaagaagacgatataaaaagaaaaccgaaaaaga  22887900                                          <------MYB46(1)                                          <---------DEAR3(2)                                    <---------ZAT14                             ------->TEIL <------MYB83                <<<<<<<<<<MYB80     --------->ZAT14               <---------MYB46(3)------>MYB83                                        --------->LBD16 ------->AHL20(2)        --------------->AtSPL8           --------->ANAC58           ------------>CBF ------->ICU4  <------MYB83 <-----------GT1               --------->ANAC46         <-----------------AG --------AHL20(2)        <---------------AtSPL8           --------->ANAC58         <-----------------AGL1 ----ID1       <------MYB46(1)   ------>MYB46(1)<---------ANAC58         <---------At5g28300 ->DOF2       <---------AtMYB61 --------->ANAC46<---------ANAC58         <-----------GT1   <---------MYB46(3) ---->GT1  <-----------RAV1(1) --------->MYB46(3)  ----------->GT1      <-----------GT1 <------------CBF   aaaaattagatttgtgttggtttaatatttgtacccactatagtcggtttacttggttaaacgaaatgacttatttacccctctctccccaattggttcg  22888000      ------->TEIL      --------->ARR14(2)                                      <-----------GT1      <---------ARR14(2)                        <---------ANAC58          ----------->GT1   <---------ANAC55(2)                          <---------ANAC58        <---------ARR11(3)   <---------ANAC55(1)                 ------>MYB83          --------->ICU4   --------->AHL20(2)   --------->ANAC55(2)                 ------>MYB46(1) <---------TOE2(3)--------->ARR11(3)   <---------ANAC46               <-----------GT1  <-------GAMYB       --------->RVE1(1) --------->MYB52(1)        --------->TOE2(3)    <---------ANAC46<---------YAB1<-----------TBP   aagtaacgtatttgcccctgtttgtctaacctctattcaccaacttagatgggtgttaatgtaattacgataaatatcgtttatatagttgatgtgaagt  22888100                       <---------REM1(2)                        --------->AtLEC2 --------->ARR14(2)                   --------->ANAC46                    ----------->TGA1          <---------GLK1(2)                   --------->ANAC58                 ------>ZmHOX2a(1)            <---------ARR14(2)                  --------->WOX13(1)              ------>ZmHOX2a(2)           --------->HSFB2a(2)           --------->AtMYB61                    <---------ARR11(3)            <---------HSFB2a(2)        --------->ANAC46                        --------->ARR11(3)           <---------LBD16  ------>ZmHOX2a(1)--------->ANAC58             <---------ARR14(2)        <----------DOF2      <-----   tttcctcttcccaccaaaatcactcaacacagtcgagagaagatgaagatgatcctgatgacgacgatgcaaaacgctttctggattctcttggtttttt  22888200                                            <---------AHL20(2)                                      ----------->GT1                    --------->LBD16                                      <------MYB46(1)                  --------->HSFB2a(2)                                 <----------DOF2                       <---------HSFB2a(2)                                <---------ANAC46                      <---------LBD16                     --------->ANAC46 <------MYB83                <----------DOF2         <---------ANAC58       <---------ANAC58       --------->GLK1(2)--------->LBD16  <----------DOF2         <---------ANAC58       <---------ANAC58  ----------->GT1 <---------DAG2     <---------GLK1(2) ------GT1         <---------ALFIN1 <--------P--------->GLK1(2)<-----------GT1 <---------AHL20(2)   ccatctcaatggcttcttgctccacgattccatcgcttgtaggtaaataatctggtgattctgttatacttttcccgagaaaaaattgattctttttctc  22888300                                --------->ZAT18                                <-------TEIL                               --------->TCP16(2)                              <---------ARR14(2)                              <---------ARR11(3)                    --------->MYB52(2)                         <---------At4g35610                   <---------TOE1(2)                           --------->At4g35610                  <---------MYB52(1)                 --------->LBD16   --------->YAB1           <----------DOF2    --------->ARR14(2)   <---------LBD16    <---------ATHB12           <---------DAG2    xxxxxxxxxxxxxxxx>smallRNA(s) <---------ARR14(2)  --------->ARR11(3)   tcattttccttcactttctcgttcgttttccaggtccacaaatcggaatcaactacggagaatacagctccaatcttgaagatagtagtaatcttcgatt  22888400                                  --------->ZAT6                                <-----------GT1                        <---------ARR11(1)                        --------->GLK1(2)                                                         <--                        <---------ARR14(2)                                                        ---                        --------->ARR14(2)                                                        <--            --------->ANAC46   <-----------GT1          XXXXXXXXXXXXXXXXXXXXX>MIR833-5P          ----   <---------ANAC58     ------->TEIL         <---------DAG2              ----------->HVH21     <-----   <---------ANAC58    <---------CCA1(2)     <----------DOF2         <-------TEIL            <-------   <---------ANAC46    <---------ARR14(1)<---------ATHB12    <-----------GT1 ------>ZmHOX2a(2)<------   ccattgtgtgattcacgagaacatcgaatctttttaactctcaatgacttttttttgtttgtttttccaggtccagtgatcggaatcaactatggtcgtt  22888500               <---------ALFIN1               --------->AtMYB61            --------->AtMYB61           --------->MYB46(3)          -------->P                                                                             <---          ------>MYB83                                                                           ----          ------>MYB46(1)                                                                        <---         --------->MYB55(1)                                                                      <---        --------->TOE1(2)                                                                       -----        --------->TOE2(2)                                                                       <----        <---------MYB59                                                             <XXXXXXXXXXXXXXXX -------ANAC55(2)                                                                  ------>ZmHOX2a(2) ------>ANAC55(2)     --------->ANAC58                                            <------ZmHOX2a(2) -------RAP2.6(2)     --------->ANAC58                                           <---------ARR14(2) ----->RAP2.6(3)----------->RAV1(1)     <---------WRKY38(1)                 <---------ANAC46    <---- ----MYB52(1) --------->MYB46(3)        <---------ZAT18                  --------->WRKY12       ----- --MYB46(3)<---------MYB55(2)           <---------WRKY12              --------->TOE2(3) --------->YAB1 -GAMYB <---------MYB111(1)             <---------WRKY45      <-----------HVH21  --------->ARR14(2)   acggctcaaacctaccaccaccagaagcaataccatcgctagtcaactctctctccatcaaacatgtcaaaacctttgacttggatccaagaatcaccaa  22888600  Previous    Next  AGI:  At3g61800.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO14384.1); contains InterPro domain ENTH/VHS (InterPro:IPR008942) Range:  from: 22885530    to: 22887821    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61810.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G29360.1); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G29360.2); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91576.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 22888143    to: 22889444    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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