Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------ICU4    --------->ATHB12    -------->ATHB1    --------->ATHB51   <---------YAB1 ----------->ATHB5 --->NtERF2 -MYB46(1) ----ANAC58 -MYB83 ----ANAC58                                                             --------->AtMYB61        <--- ---AtMYB61                                                   <------ZmHOX2a(1)                  <--- ---MYB46(3)                                             <---------REM1(1)                   <------- -->MYB46(2)                                             --------->ALFIN1         <---------YAB1----- -->MYB111(1)                                         --------->DAG2    <---------ALFIN1     -------- -->MYB111(2)      --------->ANAC46<---------ZAT6    ---------->DOF2 <---------PCF5    --------->GLK1(1)   tgcctattattgcctaatgacacaaaactattttgtagtgttttttttttttttataaagtgtaggaagtcggaccactcgtttatgagaaatcgaattt  22845800        <---------YAB1       --------->AHL20(2)      --------->AHL20(2)                                            <---------ANAC58               --      <---------AHL20(2)                                --------->ATHB12                   <---------HSFC1(2)     <---------ATHB12                                   <---------MYB46(3)                 <---------HSFB2a(1)     --------->AHL20(2)                                <---------ATHB12                    --------->HSFB2a(1)   --------->WOX13(1)                             --------->ANAC58  <---------ANAC58       --------->HSFC1(2) ---MYB46(1)                                      --------->ANAC58  --------->ANAC55(2)  ---------->DOF2 ---MYB83                                      ------>ZmHOX2a(1)    <---------ANAC46  <---------HSFB2a(2) --ARR14(2)                               <---------MYB46(3)        <---------ANAC55(2)--------->LBD16 ---->MYB59                              <---------AtMYB61     <---------ICU4         --------->HSFB2a(2) ->ARR14(2)     ----------->GT1   --------->AHL20(2)   --------->ICU4                <---------LBD16   ggtatcaattaatatagagagtaatttcacaaaaaaaaaaatggtggtcctgaagcaatggttgaatattacgtagaaaatggtattcccagaaagttcc  22845900                                                          --------->MYB46(3)                                                       --------->YAB1                                                      <---------ATHB12                                                     --------->ANAC58                                                     --------->ANAC58                                                    --------->WOX13(1)                                                   --------->MYB46(3)                   <---------AHL20(2)         --------->ANAC58                        ----------->RAV1(1)         --------->At5g28300         --------->ANAC58                     --------->ANAC58               <-------GAMYB         --------->ANAC46  ----------->RAV1(2)--------->ANAC55(2)           ----------->GT1      <---------At4g35610  <---------ANAC58   --------->ANAC46             <---------ANAC46      --------->At4g35610  <---------ANAC58   <---------ANAC55(2)          <---------TOE2(3)      <---------ZAT2      ------>NtERF2       --------->ANAC58             <---------TOE1(3)      --------->ZAT2<---------ALFIN1     --------->ANAC55(2)         ----------------->AGL1 -------->DOF2--------->AtLEC2           <---------ANAC55(2)         <---------YAB1 ----------->GT1 <   atagagcgagcaggccatgcccataccctgcctgcgtcttgtctcgtaacgcaacaatcaacaacttgatgaccattacggttatatggtttaattcgat  22846000                                                           <---------ANAC46                                                           ----------->GT1                                                           <---------ANAC58                                                           --------->ANAC58                                 --------->MYB52(1)        <---------ANAC55(1)                                <---------WRKY12           --------->ANAC55(1)                            <------MYB83                   <---------ANAC58                            <------MYB46(1)                --------->ANAC58                          <--------P----------->GT1        --------->ANAC55(2)                         <---------ANAC58            <---------TOE1(2)                         <-------GAMYB               <---------TOE1(3)              <------------CBF                         <---------ANAC58            <---------TOE2(2)     <---------At5g28300                        <---------MYB46(3)   --------->AHL20(2)    <---------At5g28300         ------                       <---------TOE2(3)     <---------AHL20(2)   <-----------GT1 --------->ICU4                       <---------YAB1--------->At5g28300   <---------ANAC55(2)    <---------ARR14(2) ----------DOF2<----------DOF2  <---------WRKY38(1)  <---------TOE2(3)    <-----------GT1 <----------DOF2   ttctttctcttggttcgctttgattttggttgggccaacggttaaatttaaatccaaggttacgtaatttaccattttactgcaaatattgtcttttaca  22846100                                  ----------->GT1                               --------->DAG2                              ---------->DOF2                           --------->YAB1                                                        <---                           --------->AHL20(2)                                                    <---                       --------->AHL20(2)                                          <---------ZAT18                       <---------AHL20(2)                                          --------->ZAT14                      --------->AHL20(2)   <---------AHL20(2)                      <---------ZAT14    ======================================MADS_MADS                           --------->ZAT14   -----    --------------->AGL15 <---------------AGL15    --------->DAG2    <----------DOF2            <---- <-----------GT1   <---------AHL20(2)     --------->AHL20(2) <----------DOF2 <-----------GT1  <------ --->ANAC55(2)    <---------YAB1 ----------->GT1  ---------->DOF2 <-----------GT1 *TSS      ------>ZmHOX2a(1)   tatttactacagatgggatttttatttaataaaaaagggaaatataaaatagaaaagcgttttctttttttctttctttctacagtctactctcctgttt  22846200                                                                             --------->ARR11(3)                                                                             --------->ARR14(2)                                                                            --------->GLK1(1)                                                                            <---------GLK1(1)                                                                            <---------CCA1(2)                                                                           <---------MYB52(1)                                                                     <---------SPL7                                                    ---------->ID1  <---------ANAC58 ---MYB46(1)                              --------->ANAC46          <---------ANAC46 ---MYB83                                 --------->ANAC58          <---------ANAC58 ---->MYB59                  ----------------------->TaNAC69(2)<---------ICU4<---------ARR11(3) -----AtMYB61           <-----------GT1   --------->ANAC58    <---------ATHB51                    <-- ---MYB52(1)   <----------DOF2<---------CCA1(2)     <---------CCA1(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   ggtctctctctctctctcttttttttttactcttatctctgtgcaagcaacttcgtctctctcgataatggcgttccgatatcttctcgctgtctccgtc  22846300                                                   <---------ARR11(3)                                               <-----------GT1                                               --------->ZAT6                                      <----------DOF2                                    <------ZmHOX2a(2)                                   --------->ARR11(3)                                   <---------ARR14(2)                                   <---------ARR11(3)                                   <-----------ARR10                                   <---------ARR11(1)            <-----------RAV1(1)                                   --------->ARR14(2)          <----------DOF2                                  <---------CCA1(2)--------->ARR11(3)                                  <---------ARR14(1) --------->YAB1     <---------GLK1(1)    <-------                          <------ZmHOX2a(1)  <-----------GT1  <---------ICU4 <---------At4g35610                          =================HOX2a_HOX2a      --------->GLK1(2)--------->At4g35610                          ==================HOX2a_HOX2a     <---------ARR11(3)            --------->AHL20(2) -------LBD16         ---------->DOF2------>ZmHOX2a(2)  --------->YAB1  --------->GLK1(1) <---------AHL20(2)   ttcggagtttttgtttgaattcttcaaaggacagtcggatctttgttttacactatcttcataatctttgttggatttcatcagacttgtcatttattaa  22846400                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             <---------ANAC58      <---------CCA1(2)                                             <---------MYB59               <--    <---------ANAC58                                             <---------DDF1                  ----    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        <---------ETT(2)                 <---    <---------ANAC58                                  <-----------GT1    <----------DOF2   --------->ALFIN1 --YAB1                                   <---------AHL20(2)    --------->ETT(2)         --------->ALFIN1   tccatcgcgtttctcagtgtttctagttcgccaatttcggtttttatattggctattaacaattcgtcgacataactttgtgtgttttcgagtgtgtgag  22846500                                                          <----------DOF2                                           ----------->ARR10                                       <------MYB83      ==================================HOX2a_HOX2a                                       ----------->GT1   ------>ZmHOX2a(2)                                       <------MYB46(1) <---------AGP1                                     <--------P        <---------ARR11(3)                                  --------->LBD16      <---------ARR14(2)         --------->MYB52(2)      <------NtERF2         --------->ARR14(2)        <-------TEIL             <---------LBD16       --------->ARR11(3)    <---------TOE1(3)            <---------ANAC46     <---------CCA1(2)                  ------>ZmHOX2a(1)    <---------TOE2(3)           <---------LBD16<-------TEIL                              <---------YAB1 -------RVE1(1)              <-----------HVH21--------->GLK1(2)                 ---------->ID1     -- ----->ARR11(3)          <-----------RAV1(2)  --------->ARR14(1)              <---------MYB46(3)   <- ------ARR11(3)  ---------->DOF2<------NtERF2 --------->CCA1(2)<-----------RAV1(1)  ------>ZmHOX2a(1)   atttttagggttcgttcttcaaaggcttcagggtcgcgggaaggtgagattcgattggatcttttttgttgttgtttagtttgttcctctcctcattgta  22846600               <---------AHL20(2)               --------->AHL20(2)             --------->AHL20(2)             <---------AHL20(2)           <---------AHL20(2)           --------->AHL20(2)         --------->AHL20(2)                                   <---------YAB1         <---------AHL20(2)                                  <---------AHL20(2)       --------->AHL20(2)                                    <---------AHL20(1)       <---------AHL20(2)                                  <---------AHL20(2)     --------->AHL20(2)                                    <---------YAB1     <---------AHL20(2)                                   --------->AHL20(2)   --------->AHL20(2)         <----------DOF2             <---------AHL20(1)   <---------AHL20(2)   >>>>>>>>>RAP2.2             <-----------GT1 --------->AHL20(2)   <---------ARR11(3)        <---------AHL20(2) <---------AHL20(2)  <---------CCA1(2)          --------->AHL20(2) ------->AHL20(2)--------->AHL20(2)   <----------DOF2     --------->YAB1          <-----------RAV1(1) --------AHL20(2)<---------AHL20(2)   <---------DAG2--------->YAB1       --------->GLK1(2)          <   tatatatatatatatatatatatatatctaaacttttctgcttttttgattttattacaatattatttttcaaagtttctgttcatgtgggttttttttg  22846700  Previous    Next  AGI:  At3g61700.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39750.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) Range:  from: 22846182    to: 22850064    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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