Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ZAT6                                                  <------ZmHOX2a(1) -------->DOF2   <---------ARR11(3)              ---------->DOF2      <------ZmHOX2a(1)             - ----ZmHOX2a(1)  --------->ARR11(3)        <---------GLK1(1)     --------->ALFIN1           <------ZmHOX2a(1) --->AGL15   ---------->DOF2               --------->GLK1(1)     <---------REM1(1)<-------TEIL<------   ggaaagttgaaacactaaagaactcataaactctctcaaatttagaaatccaaaagattagaagaaggtgtaggaggaagaagatgcatcaagaggatga  22821300                  <-----------TGA1                  ------->GAMYB                 --------->ANAC58                ------>MYB83              <---------ALFIN1              --------->AtMYB61              --------->DEAR3(1)          <---------At4g35610          --------->At4g35610       --------->TGA2(2)      <-----------HVH21      <-----------TGA1     --------->O2--------->ANAC46     --------->ANAC58     --------->bZIP60(2)     --------->ANAC46  <---------ALFIN1     --------->ANAC55(2)                      <---------ANAC58     --------->TGA1a   --------->AtMYB61      <---------ANAC58     --------->ANAC58 --------->MYB46(3)      --------->TOE2(3)                         --------->YAB1     =====================MYC_MYB     --------->ANAC58                                 <---------YAB1     <---------ANAC55(2)----------->RAV1(1)<---------ARR14(2)                          <<<<<<<<<ARR1    <-----------------------TaNAC69(2)--------->ANAC58                                 <---------ATHB12    <-------TEIL------>MYB46(1)       --------->ANAC46                       --------->YAB1   --------->CCA1(2) ------>NtERF2    --------->ANAC55(2)                    <---------ICU4     -----  <---------ARR14(2) <---------ATERF1(1)   --------->GLK1(2)                <---------ATHB12    <----  --------->ARR14(2)--------->DEAR3(1)<---------ANAC55(2)        ------>ZmHOX2a(1)   --------->WOX13(1) ---------->ARR10--------->ANAC58  <---------ARR14(2)  <---------ATHB12   --------->WOX13(1)   ------ ---YAB1<-----------bZIP910(2)     --------->ARR14(2)--------->WOX13(1) <---------YAB1 <<<<<<<<<ARR2   atgagatacgtcagcaccaacgccaccaccattagcaaatacgcgattccttgatcaatcgatgttcctgtgttatcaatcatcaaacaatcatagattt  22821400                                                                --------->GLK1(2)                                                     ------>ZmHOX2a(2)                                                    --------->CCA1(2)            --------->AHL20(2)                      <------ZmHOX2a(2)            <---------AHL20(2)                     --------->AGP1            --------->AHL20(1)                     <---------AGP1           --------->AHL20(2)                      <---------ARR11(3)     --------->LBD16            --------->YAB1     --------->ARR14(2) ---->AHL20(2)        <---------YAB1               <---------ARR14(2)               <---------At5g28300 -----AHL20(2)    <---------GLK1(2)                --------->ARR11(3)           <---------ICU4 --->AHL20(2)  <---------WOX13(1)                 <---------CCA1(2)   <---------ARR14(2)       ------   aatttcccccaaaattaattgattctgaatgcaatgttaagagaacaatatcagatctggtgagagaatgtggaatcggaaaacattaccgtcgctagtg  22821500                              <------NtERF2                             --------->LBD16                             <---------ATERF1(1)                             ------>NtERF2                            --------->DEAR3(1)                            --------->RAP2.3(2)                            <---------DEAR3(1)                            <---------ATERF1(2)                            --------->ATERF1(2)          ---------->DOF2                            --------->RAP2.3(3)        --------->ANAC58                           <------NtERF2               --------->ANAC58                           <---------LBD16  --------->MYB52(1)                           --------->ATERF1(1)  <------NtERF2                                  ------                           --------->DEAR4(2)  ------>NtERF2                           <---------ARR14(2)                           --------->ORA47(2) <---------RAP2.3(3)                      --------->ARR14(2)                  <------ZmHOX2a(1)        ----------->HVH21                          <---------GLK1(1)                <---------TOE2(3)          ----------->TGA1                     --------->MYB52(1)  -                <---------TOE1(3)        <---------At4g35610                <---------ANAC55(2)------          <------ZmHOX2a(1)--------->RAP2.3(1)<---------DEAR3(1)           --------->RAP2.6(3) ------       <-----------RAV1(2) --------->ERF1--------->CCA1(2)               --------->ARR14(2)  <-------      --------->At4g35610 <---------ATERF1(1) <---------ANAC46           <---------ARR14(2)------>ZmHOX2a(1)    <------ZmHOX2a(1)     <---------RAP2.3(1)--------->RAP2.6(3)   --------->DAG2     --------->GLK1(1) --->ALFIN1 --------->At4g35610          --------->At4g35610      ---------->DOF2  ------->GAMYB-----   ggggaaggagcaggagctaaggattgagcgccggcgaatggagagatgacggcgaaaacgaaagcgaataaagcgattacggcaacggagttcctcgacg  22821600                                                                                                  ---                                                                                                  ---                                                                                             --------                                                                                             --------       --------->ARR11(3)                                                                    --------       <---------ARR11(3)                                                                    -------- --->ANAC58                                                                                --------->MYB52(1) -------->At4g35610                                     <---------GLK1(1)             <----------ID1 --->ANAC58                                          --------->ANAC58               --------->CCA1(2) --->ANAC46                                          --------->ANAC58      --------->LBD16<---------SPL7 --ATERF1(1)      <------ZmHOX2a(1)                --------->CCA1(2)      <---------DEAR3(1)--------- ->NtERF2   <---------LBD16                       <----------ID1         <---------LBD16 <---------MYB52(2)   ccatctcaagattttacggaggacaaaattgaagaagagtacgagagagagagagacgaaatctgaatgaacaagtccggcgagagagacgacgaacgac  22821700     --------->MYB46(3)                                                                          ====    --------->ANAC58                                                            <---------MYB52(1)    --------->ANAC58                                                 --------->LBD16             <--- ------>ANAC58                                                      <---------LBD16              <--- ------>ANAC58                                            <-----------GT1      --------->LBD16<------ ->ANAC58                                               <---------WOX13(1)   <---------LBD16  <<<<<<<ZML2 --->HVH21            <------ZmHOX2a(2)                <------------CBF  ---------->TaMYB80--------->HSFB2a(2) ->ANAC46       <----------DOF2                <---------YAB1       <---------ANAC46       <---------HSFB2a(2) ->ANAC58---------->DOF2           <----------DOF2 --------->YAB1  <---------LBD16      --------->ANAC46 >SPL7------->GAMYB   *TSS ----------->TBP    <-----------TBP     <---------At5g28300<---------ZAT18   acggacaaccaaaaacccctttggatcatatatatggctataacgcgtttttatagtaattgactgtttaccgggtatagccggtaatccactctagaac  22821800                                ------->MYC3                                <-------MYC3                               --------->O2                               <---------O2                             <---------TGA1a                          =============MYC_MYB                            <---------AHL20(2)                          ----------->HVH21                       <---------DEAR3(2)                          ------->GAMYB                           <------MYB46(1)       <------------CBF <---------At4g35610                       <---------MYB46(3)    ------------>CBF    --------->At4g35610                       <------MYB83   <-----------HVH21   --------->MYB52(1)                       <--------P--------->AHL20(2) ======================================bZIP_DOF              ------>ZmHOX2a(1) -------DOF2          <---------ZAT14               <-----------GT1   --------->MYB52(2)          --- ------DAG2   =========================bZIP_DOF    ----------->HVH21 <-------TEIL          --------->ANAC46 ---ARR11(3)  ---------->DOF2============================================MYC_MYB <----------DOF2-----   ttttctgtcaattgttcaaaggagttaactgacatgtgtcattttctggctaaatgaccgttcctagttggttcgtttaatttctttctattccctcaac  22821900                         --------->YAB1                        <---------YAB1                      --------->YAB1                      <---------ICU4                      --------->ATHB51                      -------->ATHB1                      -------->HAHB4                      <---------AHL20(2)                      <--------HAHB4                                            --------->AHL20(2)                     <---------ATHB51                                   ------>ZmHOX2a(1)                     --------->ICU4                                     --------->At4g35610                     <---------YAB1                                     <---------At4g35610                  <---------YAB1                                   --------->ANAC46               ---            <---------AHL20(2)                                     --------->ANAC58         <--------            --------->AHL20(1)                                     --------->ANAC58         ---------            --------->AHL20(2)                                 <-----------GT1  <---------AHL20(2)<--            <---------AHL20(1)                 <---------TOE2(3)   --------->bZIP60(2)----------->HVH21 ------>MYB52(1)----------->GT1               ---------->DOF2<---------AHL20(2)--------->YAB1   <---- ---->MYB46(3)  --------->YAB1        <----------DOF2        --------->AHL20(2)--------->AHL20(2) <--   aaatggaattggaatttattgtaattattatcaaatttagctttaaactaaagttatggctaatttaacacgtcctctgaattaaaatttgacagatatt  22822000                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <----- ------>ANAC55(2)                                                                              ------ -ARR11(3)     <---------ANAC46                                                             --------- >ARR11(3)     <---------ANAC58                                     ------->MYC3            ------->TEIL -------ANAC46 <---------ANAC58         --------->ALFIN1    --------->TOE1(3)               --------- -------GT1 <----------DOF2           <---------ANAC46      --------->TOE2(3)               <-------- -------ANAC55(2)       <------ZmHOX2a(1)     <---------AHL20(2)    <-------MYC3  --------->TOE2(3)   acgcgttgagagctctttcgtgtataggagcattaaacaggggtggattttattctttgaaaccttaacatgtgtttcttctaacctttgtacgaatccg  22822100        <-------TEIL ---->LBD16 ----ANAC58                                                        <---------AHL20(2) ----ANAC58--------->At4g35610                                     --------->AHL20(2) ----ANAC55(2)                                                   <----------DOF2 ----ANAC55(1)                                                --------->ANAC58 --->ANAC55(2)                                                --------->ANAC46 >GLK1(2)  <---------At4g35610    <----------DOF2           <---------ALFIN1      <------ZmHOX2a(2) >ARR14(2) <---------GLK1(1) <----------DOF2             --------->REM1(1)       <---------ARR11(3)<- -ARR14(2)------->TEIL <---------GLK1(1)        <---------YAB1--------->ANAC58   --------->ARR11(3)--   tgtccatatgtgcatctcccatttgaaatctcttttcttttgctactattactattactacaacacgctttaattacacaagagatcaactagtttttgt  22822200  Previous    Next  AGI:  At3g61640.1    Description:  AGP20 (ARABINOGALACTAN PROTEIN 20). Identical to Arabinogalactan peptide 20 precursor (AGP20) [Arabidopsis Thaliana] (GB:Q9M373); similar to AGP16 (ARABINOGALACTAN PROTEIN 16) [Arabidopsis thaliana] (TAIR:AT2G46330.1); similar to unknown [Populus trichocarpa] (GB:ABK93766.1); contains InterPro domain Protein of unknown function DUF1070 (InterPro:IPR009424) Range:  from: 22821016    to: 22821722    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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