Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <-----------HVH21                               <-------PIF5                               ------->MYC4                               ------->MYC3                               <-------MYC3                               ------->MYC2                               ------->PIF5                               <-------MYC4                              --------->O2                              --------->ANAC55(2)                              ===============================================bZIP_DOF                              <---------ANAC55(2)                              <---------O2                              --------->TGA1a                                                  <-----                            <---------ALFIN1                                                  <------NtERF2                          ==============MYC_MYB                                               ------>NtERF2                        <---------MYB111(2)                                                   <------                        <---------MYB111(1)                                                   <------                        --------->MYB46(3)                                                   --------                        <---------MYB46(2)                                                   --------                        <---------MYB52(2)                                   --------->HSFB2a(2)                    --------->DOF5.7(2)                                     <---------LBD16  <-------                    --------->At5g28300                                   <---------ARR14(2) --------                   ----------->GT1                                       <---------MYB52(1)  --------                  --------->ANAC58                                 <---------GLK1(1)         --------                  --------->ANAC58                                 --------->GLK1(1)         --------                 --------->SPL1(2)                                ---------->DOF2 ------>ZmHOX2a(2)                 --------->SPL7<-------MYC2                     --------->LBD16  <------ZmHOX2a(2)---               <---------SPL7 <---------TGA1a                  <---------ANAC46  <---------GLK1(1)---             <---------------AtSPL3                           <-------TEIL--------->ARR14(2)<--------          ==============================bZIP_DOF           <---------At4g35610  <---------ARR14(2)---          <----------DOF2 -------->P                       --------->At4g35610  --------->ARR14(2)--- -ZmHOX2a(1) --------------->AtSPL3         --------->MYB52(1)<---------LBD16<---------HSFB2a(2) ----   caattggctctactttcggtacggtaactaccacgtgtcataaatctaacgtctcaatctgagatgcggaaagccgtttctggatcccccattggccgcc  22815800    ------->GAMYB    --------->DEAR3(1)    --------->RAP2.6(2)   --------->MYB46(3)   --------->DEAR3(2) --------->ARR14(2) <---------ARR14(2) -NtERF2 ---ATERF1(1) ---RAP2.6(3) ->ANAC46 ->ANAC58 --ATERF1(2) ->DEAR3(1) ->ATERF1(2) ->ANAC58<---------MYB52(1) ->RAP2.6(2) ------>ANAC58                                                                <---------AHL20(2) ------>bZIP60(2)                                             --------->ANAC46--------->AHL20(2) -RAP2.6(2)                      <---------AHL20(2) --------->LBD16      --------->LBD16 ------>ANAC58                  --------->AHL20(2) --------->LBD16     <---------LBD16              - ------>ANAC46                --------->TOE2(3)   <---------LBD16    <-----------GT1          <------ -->NtERF2               <----------DOF2 <-----------ARR10  <-----------GT1  --------->AHL20(2)  <---   acgaaaccgcccttaagcatcgtccctctttacattaaatccaaatctaattcccggtttataaactccattaaccggattaaatttcaataggttaagc  22815900                                                    ----------->GT1                                     --------->ARR14(1)                                     --------->CCA1(2)                                    --------->ARR14(2)                                    <---------ARR14(2)                               <---------AHL20(2)  --------->DAG2         ------->TEIL  ------>MYB46(1)<-------TEIL <---------TOE1(3)     <-----------HVH21 -------->YAB1         ------>MYB83 --------->ARR11(1)             --------->ATHB12                <- ---TOE1(3)          --------->MYB46(3)     ----------->GT1       <---------YAB1     <---------CCA1(2) -------DOF2      <-----------GT1 <---------TOE2(3)<---------TOE2(3) <---------WOX13(1) --------->YAB1   tttgataaacgtatgtcatttcaccaactatattttaagatacgtttagttataaggttgaatgagttttgattgggtcagtgtctcatatcatatgaat  22816000                                                   --------->AHL20(2)                                               --------->AHL20(2)                                               <---------AHL20(2)                                               --------->AHL20(1)  <---------ANAC55(2)                                              <---------AHL20(2)   --------->ANAC58                                              --------->AHL20(2)   --------->ANAC46        --------->ANAC58                   --------->AHL20(2)      --------->ANAC58        <---------ANAC55(2)                --------->AHL20(1)      --------->O2            --------->YAB1        --------->ANAC58                  --------->AHL20(2)       --------->ANAC55(1) --------------        --------->ANAC55(2)        <---------ARR11(3)              ----------->GT1     <-------------        --------->ANAC46           --------->ARR11(3)   ----------->GT1           --------->ARR11(3)        --------->ANAC55(1) ----------->GT1<---------AHL20(2)      --------->ANAC55(2)--------------- --------ZAT6           ----------->HVH21 <---------AHL20(2)     <-----------GT1  <---------ARR11(3)   agtgttgaacacgcatcaatttctctgtaacagttaaaatctaattaaattaattacatagaaaaaatcacgttactaaacaaaaatctccaaaaatagt  22816100                             --------->LBD16                             ------>ZmHOX2a(1)         *TSS                            --------->TOE1(2)      <-----------GT1    <XXXXXXXXXXXXXXXXXXXXMIR868   --------->MYB52(1)  <---------DAG2 ----------->GT1        --------->KAN4(2)       <----------DOF2 ->AGL15               --------->HSFB2a(1)<---------ARR14(2) --AGL15             <------ZmHOX2a(1)    --------->ARR14(2)                                    ----- -->AGL3--------->YAB1 <---------HSFB2a(1)--------->GLK1(2)<-----------GT1                    -------   gatgagttaatagtatttaagaaggatgttcctgagaaacggcgattcttctttaaccttttgactcttcttctctctctctctgcaaattcaaaacagt  22816200                                                                                       --------->SPL7                                                                                       --------->SPL1(2)                                                                                       <---------TOE1(2)                                                                                     <---------SPL7                                                                                   <---------------AtSPL3                                                                                   <---------------AtSPL8                                                                                  --------->GLK1(2)                                                                                  <------------------SPL14                                                                                 <---------GLK1(2)                                                                         --------->ZAT14      <------   <-----------GT1                                                       <---------ZAT14  <---------- ------>GT1          <-----------GT1                                <---------ZAT14--------------->AtSPL3 ---->GT1           <-----------GT1                 --------->CCA1(2)    --------->ZAT18 ----------->GT1   gaaaaaaacctctcttcattttttaactccctctctctctctctctctatggagagacgaacgagacgagtgaagttcacagagaatcgtacggtcacaa  22816300                 --------->MYB52(1)                ----------->HVH21     <---------ANAC58         <---------ALFIN1             --------->ANAC55(2)     <---------At4g35610              <---------ANAC55(2)     --------->At4g35610    --------->LBD16                                              ------>NtERF2     --------->ZAT2    <---------GLK1(1)                                              ------>NtERF2  <---------At4g35610  --------->GLK1(1)<---------CCA1(2) ------>ZmHOX2a(1)          --------->DEAR3(1) ---MYB52(2)   <---------MYB52(2)     <---------ANAC58    <----------DOF2          ------>NtERF2    - -HVH21  --------->REM1(1) --------->ANAC46             ------>ZmHOX2a(2)         --------->DEAR3(1)-   acgtagcagctacaccatctaacgggtctccgagactggtccgtatcactgttactgatcctttcgctactgactcgtctagcgacgacgacgacaacaa  22816400                                                                                     ---------->DOF2                                                                                    <------ZmHOX2a(1)                                                                                --------->DEAR3(1)                                                                                <---------ANAC46                                                                               ------>NtERF2         <---------MYB46(3)                  <---------GLK1(2)               <---------DEAR3(1)         --------->ABI4(2)      ----------->HVH21                           <---------LBD16         --------->MYB55(2)   <---------ANAC58                              --------->LBD16        --------->ALFIN1      <---------ANAC55(1)                          --------->DEAR3(1)   --------->MYB52(1)         --------->ANAC55(2)                       --------->AtMYB61  ----------->HVH21           <---------ANAC58                         --------->MYB46(3) <-----------HVH21            <---------ANAC55(2)           --------->ARR14(2) <------NtERF2 <-----------TGA1             <---------ANAC46--------->GLK1(2)       ------>ZmHOX2a(1)--------->DAG2 -------->ANAC46  ----------->GT1    <------ZmHOX2a(1)      <---------ARR14(2)------>NtERF2 --------- -------->bZIP60(2)          <-------TEIL  ----------->ARR10------->TEIL<---------ALFIN1    ---------   caacgtcacggtggttccaagagtgaaacgatacgtgaaggagattagattctgccaaggtgaatcttcttcctccaccgcggcgaggaaaggtaagcac  22816500                                        <---------DEAR3(1)                                        <---------At1g77200                                        <---------DREB2C(2)                                       <---------------------WRI1                                      <-----------HVH21                                     <---------O2                                     ===========================bZIP_DOF                                     --------->TGA1a                                     --------->O2                                  --------->ETT(2)                                --------->REM1(2)                               --------->ALFIN1                             --------->TGA1a                             <---------ANAC55(2)                             <---------O2                                                          <-                             <---------ANAC58                                                    <---                             --------->ANAC55(2)                                                 <---                             <---------ANAC55(1)                                                <----                             ===================================bZIP_DOF                        -----                             <---------ANAC58                     <-----------HVH21           <------                             --------->O2<---------DEAR3(2)      <---------ANAC46             <------                             <---------TGA1a                     <---------TGA1a              <------                             <---------ANAC46                    <---------O2                <-------                             <---------bZIP60(2)                 <---------ANAC58        --------->ARR14(2)                            ----------->STF1                     <---------ANAC58        <---------ARR14(2)       ================================bZIP_DOF           --------->ZAT14               --------->HSFB2a(1)       ========================================bZIP_DOF   <---------ZAT14               <---------HSFB2a(1)       ---------->DOF2    ----------->TGA1<---------------------WRI1                    --------->HSFC1(2)      <------ZmHOX2a(1)   ----------->HVH21               <-------TEIL       <---------ARR11(3) -----   <------ZmHOX2a(1)    <---------At4g35610----------->HVH21    <-----------------------TaNAC69(2)--- --------->ALFIN1<---------MYB46(3)  <---------TGA1a  --------->DAG2         --------->ARR11(3) <---- >ANAC58        <---------AtMYB61 <---------ETT(2)   ---------->DOF2 ----------->HVH21  <---------HSFC1(2) >ANAC58    <---------ZAT14<---------TGA2(2)         ======================bZIP_DOF    ----------->ARR10   aaggaggaggaaagcgtagtggttgaagatgacgtgtcgacgtcggtgaagcctaaaaagtacagaggcgtgagacagagaccttggggaaaattcgcgg  22816600                                                              <---------At4g35610                                                              --------->HSFB2a(1)                                                              <---------HSFC1(2)                                                              <---------HSFB2a(1)           <-------TEIL                                       --------->At4g35610          <------ZmHOX2a(2)                                   <---------ZAT2         <---------ARR14(2)                                   --------->HSFC1(2)         --------->ARR11(3)                             <------NtERF2         <---------ARR11(3)                           <---------ANAC46          ---------->DOF2        --------->GLK1(1)                             <---------DEAR3(1)    --------->ANAC58 -----NtERF2                                         <---------LBD16       --------->SPL7 ------DEAR3(1)                                    <---------O2          --------->ZAT18 ------ANAC46                                      ===========================bZIP_DOF--------->LBD16 -----LBD16------>ZmHOX2a(2)                       ===========================bZIP_DOF------>NtERF2 ->NtERF2--------->AGP1            <---------ANAC46--------->TGA1a       <---------ZAT18 ---RAP2.6(2)                --------->ARR14(2)   <---------At5g28300    <---------SPL7 ---DEAR3(1)         <---------RAP2.6(3)          <---------LBD16       <---------ANAC58 ---RAP2.3(2)        <---------SPL7<---------ANAC58--------->O2         <---------ANAC58          --- --LBD16<---------GLK1(1)<---------LBD16   <----------DOF2 <------ZmHOX2a(1)--------->ANAC58  ------- ---->ATERF1(1)    --------------->AtSPL3  ==================bZIP_DOF   <---------ANAC46   <-------TEIL ------>LBD16<-----------HVH21     <---------ANAC58<---------TGA1a     <---------------AtSPL3 <------ --NtERF2--------->ARR14(2)  <---------ARR14(2)<-----------HVH21   <----------DOF2   --------->RAP2.6(2)   cggagattagagatccgtcgagccgtactcggatttggcttgggacttttgtcacggcggaggaagctgctatagcgtacgatagagccgcgattcatct  22816700  Previous    Next  AGI:  At3g61630.1    Description:  CRF6 (CYTOKININ RESPONSE FACTOR 6); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor CYTOKININ RESPONSE FACTOR 6 (CRF6) [Arabidopsis Thaliana] (GB:Q9M374); similar to CRF5 (CYTOKININ RESPONSE FACTOR 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G46310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74147.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 22816155    to: 22817502    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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