Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <-------TEIL                          --------->DAG2              <------ZmHOX2a(2)              --------->CCA1(2)                                            --------->LBD16             --------->ARR11(3)                                           <---------ANAC46      -----             <---------ARR11(3)                                           <---------ANAC58      <----             <---------ARR14(2)   <---------ICU4                 ----------->GT1                <----             --------->ARR14(2)  <---------YAB1               <---------ZAT2   --------->MYB52(1)    --------->ARR11(3)   ---------->DOF2                      <---------At4g35610     <---------ARR11(3) ---->ZmHOX2a(2)    --------->AHL20(2)                        --------->At4g35610     --------->ARR11(3) ----->ARR11(3)     <---------------AGL15                    <-----------RAV1(1)    ----------->ARR10 ------ARR11(3)    ----------------->AGL3              --------->ARR14(2) <---------ANAC58 <---------At4g35610   atcttggatattgaagatccaactaaataaagttcatcattttctgtttcaaatagggattttctgctggtaaattccgtctaactgagattttgctgat  22749000                                                           <---------ICU4                                                           --------->YAB1                                                          --------->ICU4                                                    ----------->GT1                                                   ----------->GT1           <-----------GT1                       --------->ARR14(2) --------->YAB1                                  <---------ARR14(2) ---->bZIP60(1)                     ----------->RAV1(1)   <---------ATHB12                         -- -----bZIP60(1)                --------->GLK1(1)<------ZmHOX2a(1)  <----------DOF2                 -- -----REM1(1)          <----------DOF2   --------->MYB52(1)--------->ATHB12                        --   gtaacataacattttacaagtagagctataccgatttccaacaaaacagaggattggaaaatcattactcttttttgatgaaataaaacgtatacattta  22749100                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                    >>>>>>>>>>WRKY43                                                    >>>>>>>>>>WRKY38                                                    <---------WRKY18(1)                                                    >>>>>>>>>>WRKY11                   --------->ANAC46                 >>>>>>>>>>WRKY6            <---------AHL20(2)                      >>>>>>>>>>WRKY26                             ----           --------->AHL20(2)--------->AHL20(1)    --------->WRKY45                            ------    --------->WRKY38(1) --------->ICU4             --------->WRKY38(1)                  ============= ------->ANAC58    --------->ANAC58                --------->WRKY12        --------->YAB1    -------- ------->ANAC58    --------->ANAC58             <---------MYB46(3)   --------->YAB1     <------------ ------->ANAC46  ---------->DOF2       --------->MYB46(3)  <---------ARR11(3)           -------------   caagcattgactattaaataaaagccataaatatactaacaacgactgagtagttgaccaatatatcacactcagaatcaacatttttgacttaataaag  22749200                                                      <---------At4g35610                                               --------->TGA1a                       ----------->GT1         <---------TGA1a                     ---------->DOF2           --------->O2                     ====================================bZIP_DOF                    <------ZmHOX2a(1)       --------->DEAR3(1)      ----------->RAV1(1)            <----------DOF2              --------->ANAC58       --------->MYB46(3)            --------------->AGL15        --------->ANAC58      --------->SPL7 ----->AHL20(2)   <---------TOE2(3)      --------->ANAC46     --------->MYB52(1) ----->GT1  <---------------AGL15      --------->CCA1(2)     <---------SPL7                       --- ============================MADS_MADS--------->ARR11(1)   <------ZmHOX2a(2)                   ------ -->DOF2    <---------DAG2     --------->YAB1  <---------O2<---------------AtSPL3       <----------DOF2 ---AGL15   =============================================bZIP_DOF   --------->RAP2.6(2) ============= -->AGL15  <-----------------AGL3   <---------YAB1   ----------->RAV1(1)  ------------>CBF     ------   aaaataatcttcaactttataaggaaagtataatcttcatgatacgccctcgtggcaacagatcgaacggccacaaaacaatcttctgtgcttttgtaag  22749300          ------->PIF5          <-------PIF5          ------->MYC4          <-------MYC4          <-------MYC3          ------->MYC3          ------->MYC2          <-------MYC2         --------->ANAC55(2)         --------->O2         <---------O2         --------->TGA1a         --------->ANAC46                                          ----------->GT1         <---------TGA1a                                          --------->TOE1(3)          --------       <---------ALFIN1                                           --------->TOE2(3)          ------>NtERF2   --------->At4g35610                                    <---------At4g35610         <---------GLK1(1) ------>CCA1(2)     <---------HSFB2a(2)                   --------->At4g35610         --------->GLK1(1) --->ANAC58         --------->HSFB2a(2)                 --------->HSFB2a(2)     <---------ANAC46   -- ==================bZIP_DOF        --------->YAB1       <---------HSFB2a(2) <---------DAG2  <-------- --->ANAC58 <-----------HVH21  <---------YAB1        <----------DOF2 *TSS<-----------GT1   <---------LBD16   ctataagctccacgtgtcatttctgtaactgttctgatcatattcaaaacaaaaactttcagaagaaacctgaaaaaacctttcggagaaatctccggcg  22749400                                                                               ---------->DOF2                                                                            --------->ANAC58                     <---------ANAC46                                       --------->ANAC58                    <------NtERF2                    <-------GAMYB       --------->TOE1(2)            <-----------HVH21                 --------->ZAT6           <---------------AtSPL3           <---------ANAC58           --------->ATHB12                 --------->DAG2 --------->YAB1 ->LBD16   <---------ANAC46    <---------ANAC58    <---------TOE2(3)   <---------------AtSPL8 -------->DOF2    <---------DEAR3(1)<---------WOX13(1)<--------P ----------->GT1--------->DAG2 -DEAR3(1) <---------ANAC58    <---------ANAC58  --------->STY1(1)    ---------->DOF2<---------YAB1   aaaaagaaccctagcgtcgagcggcgaagatgggcgtaattgatttgatcactagggttgattccatctgtaaaaagtacgaaaagtatgatatcaatag  22749500                                                    <-----------HVH21                                                    ------>NtERF2                                                   --------->RAP2.3(2)                                                  --------->RAP2.3(1)                                                  --------->ATERF1(1)                                                 --------->LBD16                              <----------DOF2    ------>NtERF2                             <---------ANAC58    <---------ATERF1(1)                             <---------ANAC58   --------->DEAR3(1)                     --------->DEAR3(1)         --------->ANAC46                     ----------->HVH21         <---------LBD16   <---------HSFB2a(2)                    --------->ATERF1(1)  <----------DOF2         --------->HSFB2a(2)                   <---------ATERF1(1)  <---------DAG2     --------->KAN4(2)                   --------->LBD16    --------->LBD16     <----------TaMYB80                   ------>NtERF2      ------>NtERF2--------->RAP2.3(3)                  <---------DEAR3(1) --------->ANAC46    <---------ARR14(2)                 <---------LBD16     --------->ANAC58    ---------->TaMYB80                  <-------      --------->ANAC58 <------NtERF2 --------->ANAC58<------NtERF2                   --------->MYB52(2)      --------->ANAC58------>NtERF2 <---------LBD16--------->DEAR3(1)               <-------TEIL    --------->CCA1(2)<---------DEAR3(1) <----------DOF2  --------->ARR14(2)    <-----------RAV1(2)   acagagagacgctaatgtctccggcgacgatgctttctcccgcctttactccgccgtcgaatatgctctcgaaactgttcttcaggttcgtttagatttc  22749600                                                                                  <---------At4g35610                                                                                  ----------->RAV1(2)                    ------->TEIL                                               ---------->ID1          <---------ANAC58                                                <---------ARR14(2)       <---------MYB52(1)                                                 --------->ARR14(2)     <---------ANAC58                                                    <------ZmHOX2a(1)    -------     <---------ANAC58                                        <---------HSFB2a(2)<---------ANAC58 --GLK1(1)<---------ANAC58            --------->ZAT6         --------->HSFB2a(2)<---------ANAC58    -   tccgatttcgtttcgttctctgtatgtttttgttttgttaactgtaaacttgtgagggacgttatagaaaacagaggatttgtcgtctgagacaaacaaa  22749700       --------->ALFIN1     --------->ALFIN1                                    --------->GLK1(1)     <-----------RAV1(1) --------->GLK1(2)       <----------DOF2                                  ---   --------->At4g35610   --------->CCA1(2)      <---------ANAC58                          --------->ARR11(3)   <---------ZAT2       --------->ARR11(1)      <---------ANAC58                       --------->DAG2   <---------At4g35610----------->ARR10         <---------ANAC46                      ---------->DOF2 --->DOF2 <---------ANAC46<-------TEIL     --------->ATHB12            <---------At4g35610<---------ARR11(3) --------->DOF2 ------->TEIL        ---------->DOF2      <---------GLK1(1)  <----------DOF2  <-------   gcgaaagctgtggcgatgaacgcagagattcgaagaactaaagctcgattgcttgaaggaattccaaaacttcagaggctttctctcaaaaaggtctttt  22749800                                                      <------MYB83 ------->MYC3                                                      <------MYB46(1)                                                      <---------MYB46(3)--------->YAB1                                                     <---------AtMYB61 <---------YAB1                                           <---------MYB46(3)      <-------MYC3                   ---                                           <------MYB83         <---------ANAC46                 <---                               ---------->DOF2      <--------P  <---------ANAC58                 <---                    ------>MYB83           <------MYB46(1)      <---------AtLEC2                -----                    ------>MYB46(1)       <---------AtMYB61     <---------ANAC58   <XXXXXXXXXXXXXXXXX ------>TOE2(3)   <---------MYB59      <-----------RAV1(1) <-----------RAV1(1)---------->DOF2  <----- ---DOF2      --------->WRKY12--------->YAB1      <---------MYB46(3)   --------->ICU4        --------   tcttaatttttgttcgatgacctaattttctatcaaagtctgtgttggtgagaggttggttttgttgcatgtgatgataagaaaggagttgtttttaggt  22749900  Previous    Next  AGI:  At3g61440.1    Description:  ATCYSC1 (BETA-SUBSTITUTED ALA SYNTHASE 3;1); L-3-cyanoalanine synthase/ cysteine synthase. similar to OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C), cysteine synthase [Arabidopsis thaliana] (TAIR:AT3G59760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62383.1); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Pyridoxal phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926); contains InterPro domain Cysteine synthase A; (InterPro:IPR005859) Range:  from: 22746722    to: 22748955    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g61450.1    Description:  SYP73 (SYNTAXIN OF PLANTS 73). Identical to Syntaxin-73 (SYP73) [Arabidopsis Thaliana] (GB:Q94KK5;GB:Q9M321); similar to SYP71 (SYNTAXIN OF PLANTS 71) [Arabidopsis thaliana] (TAIR:AT3G09740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18137.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012) Range:  from: 22749369    to: 22750959    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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