Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------AHL20(2)          --------->AHL20(2)                                                                    <----         <---------ATHB12                                                                     <------         <---------ATHB51                                                        <---------DOF5.7(2)         <---------AHL20(2)                                          <-----------GT1          -------  <------ZmHOX2a(1)                                             --------->AHL20(1)           <------- <------MYB46(1)                                   <---------YAB1<---------AHL20(2)        --------->WOX13(1) <------MYB83                                    --------->YAB1 <---------AHL20(1)       <---------YAB1 -------P--------->AHL20(2)                   <----------DOF2   --------->AHL20(2) <---------YAB1 ---ANAC46--------->AHL20(1)          <---------ANAC46          <---------AHL20(2) --------->ICU4---- -----AGL15         <---------ICU4    <----------DOF2  ----------->GT1         --------->DOF5.7(2) <-   ggtaggaacaaataatttgtaatcttggcacaaaccagtgctttgtaactttgatgatagaaaaaatttattcactagttcgataacgattatcaatcat  22744000                                                                                                    <                                                                                                    -                                                                                                  <--                                                    --------------->AtSPL8                       <---                                                    <---------------AtSPL8                       <---    --------->AHL20(2)                           --------->ATHB51                                ----   --------->AHL20(2)                            <---------ICU4                       --------->ZAT14 -----YAB1                                       -------->ATHB1                       <-------TEIL<-- ---ICU4                           ----------->GT1  --------------->AtSPL3            <---------ZAT18 -->YAB1---------->DOF2          ----------->GT1 --------->ATHB12                     --------->ZAT18 --ATHB12--------->DAG2   --------->YAB1 --------->MYB52(1)                        <------MYB46(1)--- ----->YAB1              <------ZmHOX2a(2)      --------->ICU4                     <------MYB83------ --------YAB1           --------->ARR11(3)      <---------YAB1                    --------------->AtSPL8   cataaataaaaaaagttagtttagacgatcatgaagagagaaaaaacagaattattggtactatctcttaatttcccaactctgtaggtacactcattaa  22744100                                                                                                <----                                                                                                =====                                                                                               ------                                                                                               <-----                                                                                         ------->GAMYB <---------ICU4                                                                          --------->ANAC58 ---------YAB1                                                                           --------->ANAC46 -------->ICU4                                                                           --------->ANAC58 ------HAHB4                                                                        <------NtERF2 ------YAB1                            <---------AtLEC2                          <---------ANAC46 ------ATHB12                     ------->TEIL                                   <---------ANAC58 ----->ICU4                    <---------YAB1                                    <---------ANAC58  -- -------ICU4              --------->ANAC55(2) <---------ANAC58                  --------->ZAT2 ------ ------>YAB1              <---------ANAC55(2) <---------ANAC58                ------>ZmHOX2a(1)<----- --->YAB1                <-------TEIL <-------TEIL                            =======================   tcattatggagaatgtcatagtcatggtacataatgaatgtgcatggtgcttatggtacagatgttcttaacttcttatcctggctggcaaacgccagat  22744200                                               ------>MYB46(1)            <---------ARR14(2)                 ------>MYB83            <---------ARR11(3)               <---------MYB59           <------ZmHOX2a(1)                ----------------->AG    --------->At4g35610                    -------->P --ZmHOX2a(2)                             --------->MYB52(1)            <---------YAB1 =================HOX2a_HOX2a           <---------MYB52(2)           --------->ICU4 --->ARR14(2)                           <---------MYB46(2)  <---------ICU4 ------ARR10--------->ARR11(3)          <---------MYB111(1) --------->YAB1 ------->At4g35610                      <---------MYB59    <---------ATHB12 --->ARR11(3)                         <-----------GT1      --------->ICU4--------->AHL20(2)       --- ----ARR11(3)<------ZmHOX2a(2)     ----------->GT1       --------->WOX13(1)                      <--- ==HOX2a_HOX2a                   <---------MYB52(1)  <---------ZAT6  <---------YAB1       ------>ZmHOX2a(2)   catctcaactggaggatcatgttttgttcgtaacagttagtaactaaccaaattagtgacaatcatgagggattattaaaaacagacattgatctatttt  22744300                                                                                       ----------->HVH21                                                                                    --------->ZAT6                                                                                   <---------YAB1   -                                                                                 <---------ICU4     <                                                                          --------->At5g28300       -        <---------ICU4<----------ID1                                     ----------->GT1            < ------>ATHB12 --------->YAB1    --------->At4g35610          ---------->DOF2    --------->YAB1 ----- ------YAB1   <---------ZAT6 --------->YAB1      --------->YAB1       --------->MYB52(1)   ----------   tgattagaaaacattactgataaaactacaaaaatagctggaatggagcattcaaaactctgtccaaagtccaaacggttaaattatcactgacccaatc  22744400          <---------AHL20(2)          --------->AHL20(2) --------->ATHB12 <--------ATHB1 --------->YAB1 <--------HAHB4 --------->ATHB51 <---------ICU4 -------->AHL20(2) ---------ATHB12        --------->ATHB12                <---------TOE2(3)           <----------DOF2 -------->ICU4          --------->YAB1                <---------AHL20(2)    --------->ICU4 ---------ATHB51       <---------YAB1            *TSS--------->AHL20(2)     <---------YAB1 ------->CBF        --------->ICU4        --------->TOE1(3)               --------->YAB1 -->CBF  --------->AHL20(2)               --------->TOE2(3)<---------AHL20(2)<---------ICU4 <--------   caataattagatttatttagtaagtatgattactacgaagataacattaacaaaattttatgttattgtcaatttgtcatcatcgtctttattttttatt  22744500                                          --------->ANAC46                                       --------->MYB46(3)                        ----------->GT1                                     <-----------GT1                       ------------------------>ANAC81        <----------DOF2         --------->AHL20(2)            <---------ALFIN1  >>>>>>>>>TBF1    <----------DOF2             <---------AHL20(2)          <---------ALFIN1 >>>>>>>>>TBF1       <--- -AHL20(2)  <---------AtLEC2    <---------YAB1  <----------DOF2           >>>>>>>>>TBF1  --------->MYB52(1)   tctcaactttctttgcattacatcttccaactatataattaaccactctactttctcaaatcccacactcagagaagaagaagaagaaaaaaaacagagc  22744600                           --------->CCA1(2)                                            ------>MYB83                          --------->ARR11(1)                                            ------>MYB46(1)                          <---------ARR14(2)                                          --------->AtMYB61                          <---------ARR11(3)                                         --------->MYB46(3)                          --------->ARR11(3)                               --------->LBD16                          --------->ARR14(2)                              --------->LBD16 --------->YAB1                        ----------->ARR10                                <---------HSFB2a(2)        -                    <------ZmHOX2a(2) --------->ANAC58       --------->At4g35610    --------->ANAC58-                  --------->GLK1(1)   --------->ANAC58       <---------At4g35610    --------->ANAC58<             --------->ZAT14      --------->ANAC58       --------->ALFIN1--------->HSFB2a(2)        < -------DOF2 <---------ZAT14      --------->ANAC58    <---------ZAT6     <---------LBD16--------->MYB52(1)   tttacaatttctctctacagagatcgaagatatggaaggcaaggaagaagacgttagagttggagctaacaagttcccggagagacaaccaatcggaaca  22744700                                     <---------ARR14(2)                                     --------->ARR14(2)                                    <---------ZAT2                                    --------->ZAT2                                    <---------At4g35610                                  <---------ALFIN1                               --------->AtMYB61                            --------->AtMYB61                           --------->MYB46(3)                           <---------MYB55(2)                         <---------ARR14(2)                       <---------MYB52(2)                      --------->ANAC46             --------->ANAC58  <---------ALFIN1                                              --------             --------->ANAC58 --------->MYB46(3)                                    <---------At4g35610        ----------->HVH21--------->ARR14(2)        ----------->RAV1(2)    <----------DOF2    <------- -------->At4g35610   --------->ANAC58            ------->TEIL         <---------ARR11(3)   ------>ZmHOX2a(2) -------->ZAT2        --------->ANAC58    <---------MYB52(1) <----------DOF2        --------->At4g35610 ---------ZAT2 <------ZmHOX2a(1)  --------->MYB46(3)       <---------At4g35610      --------->ZAT2 ---------At4g35610<---------REM1(2)--------->At4g35610    --------->At4g35610      <---------ZAT2  <   tcagctcagagtgacaaggactacaaggaaccaccaccagctccgtttttcgaacctggtgagctttcttcatggtctttttggagagctgggatcgctg  22744800                                                                           <---------ANAC58                                                                          --------->At4g35610                                                                          <---------At4g35610                                                                 ------>MYB46(1)                                                               --------->DEAR3(1)                  <-                                                               --------->MYB46(3)             <------                                                 ----------->GT1 ------>MYB83                 -------                                      <-----------------AG    --------->ANAC58             --------->ANAC58          <----------DOF2            <---------WRKY18(1)      --------->ANAC58 <---------ANAC58    <-          <---------DAG2          <---------ANAC58        <-----------HVH21<---------ANAC58--------->ANAC58 ->At4g35610             --------->ANAC46<-------GAMYB  --------->DAG2------->MYC3         --------->ANAC46 --At4g35610             --------->REM1(1)<---------MYB52(1)<---------WRKY38(1)<---------ANAC58    <- -------TEIL     <----------DOF2  <---------ANAC58    ---------->DOF2 <-------MYC3       --------->TOE1(2)   agttcatcgctacttttctctttctctacatcactgtcttgactgttatgggagtgaaaaggtcaccgaacatgtgtgcttccgtcggaatccaaggaat  22744900  Previous    Next  AGI:  At3g61430.1    Description:  PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel. Identical to Aquaporin PIP1-1 (PIP1-1) [Arabidopsis Thaliana] (GB:P61837;GB:P43285;GB:Q0WP60;GB:Q8L9H0;GB:Q9LDT6); similar to PIP1B (plasma membrane intrinsic protein 1,2), water channel [Arabidopsis thaliana] (TAIR:AT2G45960.1); similar to plasma membrane aquaporin (PAQ1) [Raphanus sativus] (GB:BAA32777.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 22744449    to: 22746310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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