Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->AHL20(1)         <---------AtLEC2                                      --------->AHL20(2)         <---------ANAC58                                      <---------AHL20(1)         <---------ANAC58                                      <---------AHL20(2)         <---------ANAC46                                     --------->AHL20(2)    ------->TEIL                         ----------->GT1      <---------AHL20(2) ------>ICU4                 --------->YAB1     --------->MYB52(1)                               <--- ---->YAB1        <----------DOF2        <---------ZAT6     --------->YAB1                       ----   atgatgtatttgcttgaatactttatatgtattagaatttagagtgtaaataactgaaactaaaataaatttctctgtagatgaactaaacttgtggacg  22726900                                                                                             <-------                                                                                            <-------GAMYB                              --------->ANAC58                                          <---------WRKY18(1)                          --------->AHL20(2)                                           --------->WRKY12                          <---------AHL20(2)                                        <---------MYB46(3)                       XXXXXXXXXXXXXXXXXXXX>MIR159B                             --------->DAG2         --------->At4g35610  --------->ANAC46        --------->LBD16          ---------->DOF2  <----------DOF2     XXXXXXXXXXXXXXXXXXXX>MIR159A  <---------LBD16    ----------->GT1 --------->WRKY38(1) ------MYB52(1)<---------ATHB12         ---------->DOF2  ---------->DOF2<-------GAMYB<-------GAMYB ----->DOF5.7(2)  ------->TEIL--------->ANAC58     <---------O2        <---------MYB46(3)  <---------ZAT6   ttagctttgtttgctcaatgaacttgaattaaacgaaactcttaaagcttatcacgcgggaaaggagacgaggtcgttaaaaaaagcggttgactgttag  22727000                           <---------bZIP60(1)                           --------->ETT(2)                                --------->At4g35610                           --------->ANAC46         ----------->RAV1(2)    <---------At4g35610   ----     <-----------HVH21     --------->bZIP60(1)    --------->ANAC58       --------->REM1(1)       <---    ------->GAMYB        <---------DOF5.7(2)      --------->ANAC58      <-------TEIL             ----   --------->MYB46(3)   --------->WRKY12    ---------->DOF2         --------->MYB52(2)           <--- --------->MYB52(1) --------->DAG2    --------->TOE1(3)          <----------DOF2              <------ --MYB52(1)        ---------->DOF2   ----------->RAV1(2)    <---------AHL20(2)           ------>ZmHOX2a(2)   acataaccgtcaaaacatactaaaagttgacgacatcaaacctgaagaaagaacgcctgaaatttatctttagttacatctgaaatttcgatctcacttt  22727100                                                         <------NtERF2                      <--------                                                         --------->At4g35610              --------->ATHB51                                                         <---------At4g35610              <---------ICU4   <---------ICU4                                       <---------DEAR3(2)                --------->YAB1  --------->ICU4                                       <---------DEAR3(1)                 <--------HAHB4 ----->ANAC55(2)                                       --------->ETT(1)                  --------->ICU4 ------ANAC58                                 --------->GLK1(2)                  <---------ANAC58 ----->YAB1                            <----------DOF2<---------ORA47(1)         <---------ANAC58 ------ANAC58                    --------->AtMYB61 <---------AtMYB61         <---------At4g35610 ----DOF2              ----------->HVH21     <---------GLK1(2)        ---------->DOF2    <---------YAB1   cgtaatgttgacatttctcttgacaatgacagagaccatcactttgagattctttggtcggctctcaatattgaaagtcagaggcttatccattattatc  22727200                                                  <---------ANAC55(2)                                                  <---------ANAC55(1)                                                  --------->ANAC55(2)                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58                                                 <-------TEIL                                                --------->CCA1(2)                                               --------->ARR14(2)                                         --------->ATHB12                                        <---------YAB1                                      --------->ANAC55(2)                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC55(2)                                      <---------ANAC58                    <----------DOF2                         <---------TOE2(3)     <---------ARR14(2)     <-----------GT1             <---------SPL7        <---------ARR14(2)           --------->ATHB51------>ZmHOX2a(1)          <---------LBD16<---------TOE1(3)     --------->ARR11(1)<------------CBF   <---------YAB1   <----------DOF2--------->ARR14(2)     ---------->ID1 <---------DAG2        <----- -YAB1 <---------At4g35610 <------ZmHOX2a(1) ----------->ARR10 <---------YAB1---------->ID1----------   tgattatgcttctgcggtaaggcttttaaggaacacggtttcgtgattagatacgtgtttgtcttataattgaaaccttttcctcttatccctatatata  22727300                              <------ZmHOX2a(2)                            *TSS <---------CCA1(2)                         <---------MYB52(1)         --------->DAG2            <---------LBD16     <--  <---------AHL20(2)    <-----------HVH21 <---------AHL20(2)     <----------DOF2--------->LBD16  ---- ------GT1       --------->ARR14(2) --------->TOE2(3)      --------------->AtSPL8       <---------ICU4 ->TBP           <---------ARR14(2) --------->YAB1 ---------->DOF2           ------->TEIL  --------->YAB1   ctatatacttggctcatcaaatactctgttagatcaaatcttaatttatcgcaaaaagtattctgttcttttttatatggaccggagtcacaatgacatt  22727400                                                                                                -----                                                                                               ------                                          <---------ARR11(3)                                   <-----                               <------MYB83 ------>ZmHOX2a(2)                                 -------        <------ZmHOX2a(2)      <------MYB46(1)                                                <------       <---------ARR14(2)     <---------DEAR3(1)                                              -------       --------->ARR14(2)    <--------P   <---------AGP1 --------->GLK1(1) <---------GLK1(1)  <------  --------->GLK1(2)        --------->ATHB12<------ZmHOX2a(2)  --------->LBD16                 ------- <---------GLK1(2)         <---------MYB46(3)            <---------GLK1(1) --------->GLK1(1)  <------ -------TOE2(3)   ----------->GT1         --------->ARR11(3) <---------LBD16                  <------ ------>DOF2   --------->CCA1(2)    <----------DOF2  <------NtERF2  --------->ATHB12 ---------->DOF2   aaagattccgatccaagagatggtgaaaatggttggctctttaagatctcatggcatcgatatccctgaatcaatggaaatcaacaaaaaagagaagatc  22727500                           --------->ANAC58                           --------->ANAC58                      --------->HSFB2a(2)                      --------->HSFC1(1)                      <---------HSFB2a(2)       ----------->HVH21 ---------->DOF2 ->ZmHOX2a(2)        ------>ZmHOX2a(2) --->CCA1(2)        --------->CCA1(2) -ZmHOX2a(2)        <------ZmHOX2a(2) -->AGP1           <---------ARR14(2)                                ---------->DOF2 ---ARR14(2)       --------->AGP1                                  <------NtERF2 -->ARR14(2)       --------->ARR14(2)                          --------->ZAT14 ---ARR11(3)       <---------ARR11(3)                         --------->ALFIN1 -->ARR11(3)       --------->ARR11(3)                     --------->ZAT14                           - ---AGP1           <---------AGP1                         <---------ZAT14                   <-------TEIL -----ARR10    ---------->DOF2                           <<<<<<<<<<<<<<<<<LFY   <---------AtLEC2  ---   tatgtagcagtgacagagaaagatctagaaagcaagtctagtctcgtttgggcgatacagaacagtggaggcaaagagttttgcatcgtccatgttcatc  22727600                <-----------GT1               --------->AHL20(2)           <---------AHL20(2)         --------->ANAC58         --------->ANAC58       <---------MYB52(1)      --------->LBD16                                                                   --------->ATHB12     --------->ANAC55(2)                                                     <---------ANAC58     --------->ANAC46         --------->ARR11(3)                             <---------ANAC58  <---------ARR14(2)          <---------ARR11(3)            <------MYB83   --------->GLK1(2)  --------->ARR14(2)          --------->GLK1(2)             <------MYB46(1)<-----------ARR10  ------>MYB46(1)          --------->ANAC58                 ----------->GT1<---------ARR11(3)  ------>MYB83 <---------AHL20(2)                   <------ZmHOX2a(1)      --------->ARR11(3) -------->AtMYB61          --------->ANAC58       <---------TOE2(3)        --------->ARR14(2) ---->TEIL --------->AHL20(2)<---------GLK1(2)    <---------TOE1(3)        <---------ARR14(2)    ----   aacctatccgtaagtaattaaacatccacaagaatctttttatgcagaggttaaggattatttggttaaatttggagtatcttgtgttcttgatttcaag  22727700                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                   --------->ARR14(2)                                                                             --------->TOE1(3)                                                                           ------->TEIL   --------->ANAC46                          <---------ANAC58                             <---------------AtSPL8                          <---------ANAC46        ---------->DOF2      --------------->AtSPL8     <---------ARR11(3)   <---------ANAC55(2)  <------ZmHOX2a(1)       <---------------AtSPL3     --------->ARR11(3)   <---------ANAC58    <----------ID1           --------------->AtSPL3 XXXXXXX ----->ALFIN1   --------->At4g35610   ---------->DOF2          <---------ARR14(2)  <---------ARR14(2)   cgggggagatgtttcacgagcagaaattgcgtctctacagaaaagagaaggacaaagcacataagaattcggagaagtaccttcaaatatgcaggcaaat  22727800  Previous    Next  AGI:  At3g61389.1    Description:  unknown protein Range:  from: 22727074    to: 22727193    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61390.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G45920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39621.1); contains domain Adenine nucleotide alpha hydrolases-like (SSF52402) Range:  from: 22727328    to: 22728983    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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