Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <----------DOF2                                      ------>ZmHOX2a(1)                                ------>ZmHOX2a(2)                               --------->GLK1(1)                  --------->GLK1(2)                               <---------GLK1(1)              --------->YAB1                              <---------ARR11(3)      <-----------GT1                              --------->ARR11(3)     --------->MYB46(3)                              <---------AGP1    <---------At4g35610           <---------ATHB12  <---------CCA1(2)  --------->At4g35610    <----------DOF2    <-------TEIL --------->DOF2  <----------DOF2=============HOX2a_HOX2a   <---------MYB52(1)           <---------GLK1(2)   tgaaaagcctccaataagtctttacaggtttggatctctccttctttctgagctatcaaccgtttgataatctctttgaatttctcttcagattcatcaa  22721900                                        ------>NtERF2  <---------ARR11(3)                                       ----------->HVH21                                       <---------ETT(2)--------->ARR11(3)                                       --------->ETT(2)<---------ARR14(2)                                       --------->DEAR3(1)            <---------ALFIN1                                     <---------ATERF1(1)      ------>ZmHOX2a(1)                                     --------->LBD16   --------->ARR14(2)         <---------At4g35610                                    --------->DEAR3(1)<---------CCA1(2)           --------->At4g35610                             <-------TEIL             <---------GLK1(1)      <---------YAB1      <---             --------->TOE2(3)     <---------LBD16    --------->GLK1(1)    --------->YAB1        ----   ctagactcttacaaacctcagtctctacatgttcatcaccggcgaccgaaacatggatatcttcctcatcaacactctcatgagagctctcacaagaaca  22722000                                                --------->At4g35610                                             <------ZmHOX2a(2)                                           <------ZmHOX2a(1)        --------->GLK1(2)               -                                      --------->CCA1(2)             --------->ARR11(3)              -       <----------DOF2               --------->AHL20(1)             <---------ARR11(3)              -     --------->At4g35610             --------->ARR11(3)     <---------YAB1                    -------  <---------At4g35610          ----------->GT1<-----------RAV1(2)  <---------GLK1(2)         -------- ------ANAC55(2)   <---------ANAC58  <---------AHL20(2)   --------->YAB1                <---------ANAC55(2) ----->ANAC55(2)   <---------ANAC58  <---------AHL20(1)  <---------YAB1                 --------->ANAC55(2)   tgtaatctgcttcatttcattacctgcataaatgagtaatatataggatcagaagactgattataacaagaatctttgttagacttagacacataatgtt  22722100                                                                                             --------                                                                                             --------                                    <---------MYB46(3)                                       --------                                    --------->MYB52(2)                ---------->DOF2        <-------                                  <---------MYB52(1)               <------ZmHOX2a(2)       <---------ALFIN1            --------->TOE1(3)    ------->MYC3                     --------->AGP1         ----------->RAV1(1) -------->ANAC58          <---------ANAC58                      ----------->ARR10        <---------ALFIN1 -------->ANAC58          <---------ANAC58                      --------->MYB59         --------->MYB46(3) -------->ANAC46      <---------MYB52(1)   --------->WOX13(1) <--------P               --------->ANAC58 -->TOE2(3) --------->TOE2(3)    <-------MYC3           <---------ARR14(2)             --------->ANAC58 --->GT1   ----------->RAV1(2)<---------ALFIN1          --------->ARR14(2)       <---------ATHB12   -   aaacgaaacaaaaacctgaaactcgtttgcttccacgtttgttatccatcaagagacgtttctggttagatccaaagagactaatgaacacccacacaca  22722200                                  ----------->HVH21                                  <---------ETT(1)                                        -----------                                  --------->ANAC46                                 --------->ANAC58 ->ANAC58                   <---------GLK1(1)                                      --------->ANAC58 - ->ANAC46                   --------->GLK1(1)                     --------->AHL20(2) <------ZmHOX2a(1) ->ANAC58  <-----------GT1 <---------ARR11(3)              ----------->HVH21     <--------P         - --ALFIN1--------->YAB1    --------->ARR11(3)            --------->At4g35610  --------->ALFIN1      - ----->ZmHOX2a(1)   <----------DOF2------>NtERF2     <-----------GT1          <---------------AtSPL3-   tcctataccattgataccttctctttcaagatttctccgacaatttctctccatttaacagttgacacttaaatagagaagtggtaaggaaactgttaat  22722300                                        ---------->DOF2                               --------->AHL20(2)              ----------->GT1                               --------->YAB1               --------->ARR11(3)   ---------->DOF2          --------->YAB1                  <---------ARR11(3) >GT1   <---------KAN4(2)  <---------YAB1           --------->ANAC58                     <-----------GT1 -------->ANAC46           <---------AHL20(2)       --------->ANAC58                <---------ARR11(3) -------->ANAC58          --------->AHL20(2)        --------->AtLEC2              <---------YAB1 -------->ANAC58          --------->AHL20(1)   --------->YAB1 ------>ZmHOX2a(2)   --------->ICU4  <-- -------->AtLEC2          <---------AHL20(1)  <-------TEIL<---------ATHB12      --------->YAB1   ----   acaagcaaagaataaacttatgtctgaatataataaaaaaaaaaaagattcatcatgcaaatgatctgttaaaactctgttttcatgattttttctcatc  22722400                                                      --------->ANAC58                                                      --------->ANAC58                     <---------YAB1                   --------->ANAC46                   <--------HAHB4               <----------DOF2                   <---------ICU4              <---------------AGL15           <------------CBF    <---------YAB1  --------------->AGL15        --------->ANAC58       --------->ICU4  --------->TOE2(3)        --------->ANAC58 <---------ZAT6       ----------------->AGL1                       >>>>>>>>>TBF1  --------->ANAC58 --------->YAB1             ----------------->AGL2              <------------CBF  --------->ANAC58--------->ICU4          <---------DAG2         <---------DAG2 <---------YAB1>>>>>>> ---------HVH21   <---------YAB1<---------ICU4----------------->AG<----------DOF2--------->ATHB12 ----->WOX13(1)<---------YAB1--------->YAB1<----------DOF2     --------->GLK1(2)<------ZmHOX2a(2)>>>>   agtcacacaaacgcattgtgatcattactgttcataattcgatacctttcctttacaagcaagagaaccttttttttttgggatcattgtgaagaagaag  22722500                                                                         ----------->RAV1(2)                                             ------>ZmHOX2a(2)           --------->At4g35610                                      <-----------ARR10                  <---------At4g35610                                      --------->GLK1(2)                  <---------ZAT2                                      <---------ARR14(2)    <---------ARR14(2)                                      --------->ARR14(2)    --------->ARR14(2)              ---------                                     <---------GLK1(2)      --------->ARR11(3)           --------->YAB1      <-----------------------TaNAC69(2)   <---------ARR14(2)            --------->ZAT2<---------YAB1   --------->DAG2              <----------DOF2              <---------ARR11(3)         <---------WOX13(1)  ---------->DOF2  ---------->DOF2--------->HSFB2a(2)       --------->GLK1(2)        ----------->GT1 >>TBF1----------->GT1 ------------>CBF    --------->ARR14(2)  <---------YAB1     ----------->GT1  <- >>>>>TBF1    --------->ICU4<---------ARR11(3)  <---------MYB52(1)      ------->TEIL --------->ATHB12   aagaaaaagaggtataaagattaaagacaataccttttagaatctgatccgatacttgggaaaatctgataatgcagctggagagagtgattaataagaa  22722600                                                                              --------->LBD16                                                                             --------->LBD16                                                                             --------->HSFB2a(2)                                                                             <---------HSFB2a(2)                                                                             --------->ANAC46                                                                            --------->HSFB2a(2)                                                                            <---------LBD16                                                                           <---------LBD16                                                                       --------->HSFB2a(1)                                                                       <---------GLK1(1)                                                                       --------->GLK1(1)                                                                      --------->ARR14(2)                                                                      <-----------ARR10                                                                      <---------ARR14(2)           <-                                       ------------------------>ANAC81<---------GLK1(2)  --------->At4g35610                            --------->ANAC58            ---------->DOF2<----------TaMYB80<---------At4g35610           <---------DAG2   --------->ANAC46      >>>>>>>>>TBF1     --------->LBD16     --------->MYB52(2)   <----------DOF2          --------->ANAC58   >>>>>>>>>TBF1  <-----------HVH21        <-------TEIL<- >YAB1     <----------DOF2 --------->LBD16  >>>>>>>>>TBF1    <----------DOF2<---------HSFB2a(2)   <-- ---------DOF2   <---------At4g35610 ---------->DOF2 >>>>>>>>>TBF1<---------LBD16   <---------HSFB2a(1)   actttcttttcaactttttagctgttttccacgaaaacaaaaagaagaagaagaagaagaaagctttcaccggattttcccggaaaacgttcgctgaatt  22722700            <---------AHL20(2)         <---------AHL20(2)         --------->AHL20(2)        --------->ANAC58         <---------AHL20(1)     <---------ZAT2         --------->AHL20(1)     --------->ZAT2      --------->YAB1           ------->TEIL   <----------DOF2        --------->MYB52(1) --------RAP2.6(2)  ----------->GT1--------->ANAC58 --------RAP2.3(2)  --------->ANAC58                           --------->ZAT14 -------LBD16       --------->ANAC58                           <---------ZAT14   tgcggctttaatattttataaaacgaaataacgaagctcgaaacacgagggcaaatgttgaacacagtagtgtctcaatttagatgaagaagacccatat  22722800  Previous    Next  AGI:  At3g61380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45900.1); similar to {, related [Medicago truncatula] (GB:ABD32828.1); contains domain PTHR21726:SF4 (PTHR21726:SF4); contains domain PTHR21726 (PTHR21726) Range:  from: 22719457    to: 22722254    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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