Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <------ZmHOX2a(1)                                                          <---------ICU4                                                       --------->YAB1                                                       --------->ATHB12                                                       <--------HAHB4                           <---------ARR11(3)          <---------ICU4                        --------->AHL20(2)            <---------ATHB12                      <----------DOF2                 <---------YAB1                          -------                  --------->ZAT14                     --------->ICU4                    --------->ARR14(2)           --------->ZAT14 --------->ARR11(3)       --------->YAB1                      --------->GLK1(2)  <---------ANAC58<---------ZAT18                  --------->ICU4                       <---------ARR14(2)  <---------ANAC58<---------ZAT14    <-----------GT1<---------ICU4                      <-----------ARR10 -->ICU4   <---------ZAT14<---------CCA1(2)   --------->ANAC46                         <---------GLK1(2)   ttgttcttgtctctgttctgttcactttaaatcttcatttttctctacaaacaataatcattaggacccaagagtttatcaacaatacagaatctgaacg  22704500                                                                                      --------->ATHB12                                                                                      --------->ATHB51                                                                                      --------->YAB1                                                                                      <---------ICU4                                                                                      <--------HAHB4                                                                                     --------->ICU4                                                                                  <------ZmHOX2a(1)                       <---------ANAC46        --------->AHL20(2)             <---------ARR14(2)                     <---------ZAT14           <---------AHL20(2)             --------->ARR14(2)                  <---------ANAC46<------ZmHOX2a(2)          --------->YAB1 --------->LBD16             <---------ANAC55(2) --------->ARR11(3)  <---------ANAC58       <------NtERF2          --         <-----------HVH21       <---------ARR11(3)  <---------ANAC58      <---------ANAC46        <- >TEIL<---------ICU4 --------->ZAT14         --------->TOE2(3)            <---------LBD16 --------->MYB59   tttagtactcatgtcatgtgaagtgaagtgaagaagatcaacaagaacattaattgtttgctataatcttctatgggccggataggaataattaggccca  22704600                                               --------->ICU4                                            ----------->GT1                                         <-------GAMYB                                        <---------DEAR3(2)                                        <---------MYB46(3)                                       <---------At1g77200                               --------->CCA1(2)                                       <---------DEAR3(1)                                <------ZmHOX2a(2)                                       <---------DREB2C(2)   <---------ARR11(3)         --------->AGP1 <---------MYB59                     <-----------HVH21       --------->ARR14(2)         <---------ARR14(2) ------->GLK1(2)                  <---------ARR14(2)         <---------ARR14(2)    <-----------GT1  < --------ARR11(3)                 --------->ARR14(2)--------->MYB59   --------->YAB1    --------->ARR14(2)   gtatctaacacatcaaacaaaaacacatcgaagtcgaatcgtcggtgggataattaggcccagtatattcaaacaaaataacatttaacagatccaagtc  22704700                              <--------HAHB4                              --------->YAB1                              --------->ATHB51                ------->TEIL  <---------ICU4               --------->MYB52(1)             --------->MYB46(3)             <---------MYB52(2)                                                                   ---      <---------ANAC58       --------->AHL20(2)        ---------->DOF2           ------>NtERF2    ---      <---------ANAC58       --------->ICU4     >>>>>>>>>MYB98                  --------->DEAR3(1)---      <---------ANAC46     --------->YAB1      <-----------GT1          ------>ZmHOX2a(1)    -------- -----------RAV1(1) <---------ANAC46          <-----------GT1   <-----------RAV1(1)          <-------   caatgttgtcgtggaacgaacgtcgtttagaataattaagcccagtatttaacatatcaaagcccaatgttgtcctaaaacgacgacgtttgaatgtgga  22704800                                                                                                    <                                                                                                 ----          --------->LBD16                                                                        ----          <---------HSFB2a(2)                                                                    ====          ------>ZmHOX2a(1)     <----------DOF2                                        --------->ANAC58          --------->HSFB2a(2)   <---------DAG2                                         --------->ANAC58        ----------->RAV1(2)    <---------DAG2                                       *TSS         <---   ------------>CBF         ------->GAMYB                                           <---------MYB52(1) -------->GT1              <------------MYB.PH3(2)                       --------->ARR14(2)      <--- ------>ANAC58             --------->MYB46(3)               <---------HSFB2a(2) -------->P--------->DEAR3(1) ------>ANAC58             <---------MYB111(2)        <-----------GT1    <---------ARR14(2)------>NtERF2 ->ALFIN1<---------LBD16   <---------MYB46(2)       <-----------GT1  ------>ZmHOX2a(1) --------->ANAC46 --------AtSPL8--------->MYB46(3)      ------>ZmHOX2a(1)    --------->HSFB2a(2) =====================   acgtaaacaatcctggaacaaccgtttcaactacctttttcctatcacttgttttttcacctctcgaagtcctccgatttgctacccttacgcagcctca  22704900      ------->GAMYB      --------->AtMYB61     --------->MYB46(3)                                              ------>NtERF2     <---------MYB55(2)                                              >>>>>>>>>>>>>>>>>LFY   --------->WOX13(1)                                                --------->LBD16 -----------HVH21                                                   --------->ANAC46 ----->TGA1a                                                        --------->ANAC58 ----->O2                                           ---------->DOF2 --------->ANAC58 =============MYC_MYB                            --------->TOE2(3)  <<<<<<<<<<E2Fa ------TGA1a                              --------->TOE1(3)     <-----------GT1 --------->WOX13(1) ------O2                                 --------->TOE2(3)<---------MYB52(1)------->TEIL   --------- ======MYC_MYB                ---------->ID1     --------->TOE1(3) <---------LBD16       ------->TEIL   tgtgtcaaccaccatttctcttcttcatcttcgtctctatcaaaccctaaacctaaaaccccttattttcccgccaatgtatcaatccatgaatctatca  22705000                                                                           --------->WOX13(1)                                                                    --------->ARR14(2)                                                                    --------->GLK1(2)                                                                    <---------ARR14(2)                                                                   <---------GLK1(1)                                                                   --------->GLK1(1)                                                            <---------ARR14(2)                                    <---------YAB1          --------->ARR14(2)                            --------->HSFB2a(2)            <---------ARR14(2)                            ------>ZmHOX2a(1)              <---------GLK1(2)                 <-------                     <---------ATHB12       ------>ZmHOX2a(1)  <---------ANAC55(2)     ------>MYB46(1)                     ==============HOX2a_HOX2a         <---------LBD16   <---------MYB52(1)--------->LBD16                     ==============================HOX2a_HOX2a<---------LBD16          ------>MYB83                     <------ZmHOX2a(2) <---------GLK1(1)   --------->ARR14(2) --------->TOE2(3)    --                    <-----------HVH21  --------->GLK1(1) --------->LBD16<-----------HVH21 --------->O2              --------->MYB46(3)  --------->YAB1     <---------ALFIN1   --------->LBD16-------->P  <- >WOX13(1) <-----------GT1  <---------HSFB2a(2)<---------GLK1(2)--------->LBD16      --------->AtMYB61   gtttcttccaatttcactcaccgatcactcctcgaatcacgatttcctatattctccaccggattccgcaaatccgtcaatctcaaacctccccgtgtct  22705100                                                                           --------->ARR14(2)                                                                           <---------GLK1(2)                                     --------->MYB52(1)                    <---------ARR14(2)                            --------->ANAC46                            <---------------AGL15                            --------->ANAC58                            --------------->AGL15                            --------->ANAC55(2)                         --------->HSFB2a(2)                            <---------ANAC55(2)                         <---------HSFB2a(2)                            --------->ANAC58                           <-----------------AGL1                       --------->ANAC46                                <-----------------AG                <---------ATHB12  --------->TOE1(3)                    <-----------------AGL2       -       ------>ZmHOX2a(1)<-----------HVH21                              ----------------->AGL2     <-- ----HVH21   --------->TOE1(2)    --------->TOE2(3)                    ----------------->AGL1     <-- --------->RAV1(2)     <---------At4g35610                       <---------At4g35610              <-- --------At4g35610     --------->At4g35610                  ------>ZmHOX2a(1)               ---------   catctggtcctgaatccaacgattcaggtcacgaaaccttaaccgataagcttatccatctcctcagagctgttccagattgggcagacgagattaaaga  22705200                                                                          <-----------HVH21                          <---------ZAT14                               <-------TEIL             <---------ARR14(2)                                       <-------MYC3             --------->ARR14(2)       --------->CCA1(2)               ------->MYC3         <---------At4g35610     --------->ANAC46                     <-------MYC2         --------->At4g35610   --------->ANAC46                       ------->MYC2 -------->ALFIN1          <---------REM1(2)                     --------->ANAC46 -------ANAC58            --------->ZAT14                   ----------------------->TaNAC69(2) -------ANAC46  --------->ANAC58 --------->ANAC58        <---------ARR11(3) -------ANAC58  --------->ANAC58 --------->ANAC58        --------->ARR11(3)                <--------- ->DOF2 ----------->RAV1(1)  --------->ANAC46           --------->At4g35610   <---------At4g35610   gcgtgggatgcagcagaaacgctctctctacacacacgagaaatgggttgaacatagaagctctcttcgccatgtgcgtcatctactctcgagcttttct  22705300                                                                                   <----------DOF2                                                                                  <---------ANAC58                                                                              --------->LBD16                                                                             --------->DEAR3(1)                                                                             --------->O2                                                                             <---------TGA1a                                                                             <---------ANAC46                                                                             <---------O2                                                                             =================bZIP_DOF                                                                           --------->LBD16                                                                           ------>NtERF2                                                           ------>ZmHOX2a(2) --------->TGA1a                                                       <---------YAB1     --------->ANAC46        ===                                                   ====================================MYC_MYB   ----                                                   <-------GAMYB          --------->DEAR3(1) <-------                                                  <---------MYB46(3)     <---------LBD16     <-------                                                 <---------ANAC46   --------->REM1(1)    <---------WOX13(1)                                  <<<<<<<<<TBF1  <------NtERF2  <---------STY1(2) <---------ANAC58--- -DOF2 <-----------GT1  ----------->RAV1(2)  <-----------HVH21  --------->STY1(2) <---------ANAC46---   tcacgagttatactctccctgattccacctgttttcttcttcacaagcgtcgcggttgtgatcgctagctacaactccgccgtggctttggattggcttc  22705400  Previous    Next  AGI:  At3g61320.1    Description:  Identical to UPF0187 protein At3g61320, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9M2D2;GB:Q93YZ0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39584.1); contains InterPro domain Protein of unknown function UPF0187 (InterPro:IPR007913) Range:  from: 22704884    to: 22706729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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