Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <XXXXXXXXXXXXXXXXXXXXMIR865-3P                    <---------ANAC58                    <-------GAMYB                    <---------ANAC58                   <------MYB46(1)                   <------MYB83                   <---------MYB46(3)                   --------->MYB52(2)          ----------->HVH21         --------->LBD16        <---------ANAC55(2)                                   <----------DOF2        <---------ANAC58                           <---------LBD16        <---------ANAC58                           --------->LBD16        <---------ANAC55(1)                    <---------ARR14(2)                            --------        ----------->GT1                        --------->ARR14(2)                            --------        <---------ANAC46         --------->ALFIN1 <---------LBD16                            --------       ------>ZmHOX2a(2)        <------ZmHOX2a(1)<---------LBD16                           <---------DOF5.7(2)       ================================HOX2a_HOX2a--------->TOE1(2)                  <---------LBD16       ===================================HOX2a_HOX2a  --------->GLK1(1)           --------->ARR14(2) --------ANAC58    --------->MYB55(2)    <------ZmHOX2a(1)  ------>ZmHOX2a(1)      <---------ARR14(2) --------ANAC58   <---------AtMYB61   <------ZmHOX2a(1)--------->ARR14(2)        ----------->HVH21 ----GLK1(1)      <---------TOE2(2) --------->ALFIN1   <---------ARR14(2)        --------->ANAC46 --->GLK1(1)     <---------MYB52(1)<------ZmHOX2a(1)--------->LBD16    ----------->GT1 --------->LBD16   tccttgtgatccgtgaaacgttggttgagtttgaggaggaggaggaccagaaccggggattcctctttggatatagtaagaacccgacccggataacgcc  22703400   <---------CCA1(2) <---------ANAC58 <---------ANAC55(2) <---------ANAC46                                                                      <------ZmHOX2a(1) <---------ANAC58                        --------->DOF5.7(2)       <---------------AGL15 ->ANAC58                   ---------->DOF2     ----------->GT1    --------------->AGL15 ->ANAC46          --------->TOE1(3)    <----------DOF2           <-----------------AGL1         ---- ->ANAC58   <------ZmHOX2a(2)    --------->GLK1(2)                ----------------->AGL2  <------ZmHOX2a(1)   attgcgtctcttcgatccatagcttaaccaaaaagactctgactttaacttagtaaaattcgatggggaccctaaatggctaacttataggaggagggat  22703500                                                                       --------->RVE1(1)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                 ------->GAMYB                                                                --------->MYB46(3)                 --------->GLK1(2)                         --------->AtLEC2                  --------                <---------GLK1(2)                          --------->ANAC58                  --------             --------->YAB1                                --------->ANAC46           --------->YAB1    <----------ID1    ---------->DOF2                      --------->ANAC58          <---------YAB1 < -------------------->ANAC81                      <---------ARR11(3)  --------->GLK1(2)      --------   aagaagagaacaaaatcagaatctaaaagggttcgatagacttcaagagcaagataacaacatgcaaccgaaaatctctgaaaacttatcaaaacacaca  22703600             ------>MYB46(1)                                                                     ----             ------>MYB83                            --------->GLK1(2)                           <---           <---------MYB59                           <---------ARR11(3)                        ------        <-----------GT1                              --------->ARR11(3)            ---------->DOF2<-- ->ANAC58  <---------MYB46(2)               --------->CCA1(2)               ---------->DOF2    <----- ->ANAC58 --------->ANAC46               --------->ANAC58               <------ZmHOX2a(2)   --------- ----------DOF2             ------->TEIL --------->ANAC58              --------->AGP1       <-------- ->ANAC46 --------->ANAC55(2)  <----------DOF2 --------->YAB1        --------->MYB59    ---------->DOF2   aactttcatttcacctaattgttttttatgtagctttagtatcaagctatgagaaaatctcaagatgaaattagatccaaaagagaaaaggaaagaactt  22703700         <---------CCA1(2)  <-----------GT1 ----->AHL20(2) ------AHL20(2)                                         ----------->GT1                   --------->YAB1 --->TOE2(3)                                            --------->ALFIN1           --------->YAB1 ----------------------ANAC81            --------->ANAC58                       --------->WOX13(1) -----DOF2                               --------->ANAC58                     <---------ATHB12 >ARR11(3)                             ---------->DOF2<---------ANAC46      --------->WOX13(1) ------ -ARR11(3)  <------------------------ANAC81 ---------->DOF2        <----------DOF2<---------ATHB12   taattttcttcatctcttcttctctgtttcattctctcaccaaaagcaaagaaatgaagtgtgaataagctttctcatccatcaatcaacaatggtgaag  22703800                                                                 <----------DOF2                                                         <----------DOF2                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46         *TSS                                      <-----------RAV1(1)     --------->DAG2                                <---------bZIP60(2)                   ------------    ---------->DOF2            <----------DOF2     <---------REM1(1)       ----------->HVH21 ----->GT1                 <----------DOF2   ------->TEIL<---------DAG2   <-----------HVH21    <-----   aaaaaaaaaagttttctagggttctctctctttctttcttcagagtgtatgtgatgttgctttttttcttttactgggtgacagagggaaaacagaaaca  22703900                     <---------ATHB12            ------>ZmHOX2a(1)          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        --------->ARR11(3)        <---------ARR14(2)        --------->ARR14(2)                                                                     ------        <---------ARR11(3)                                                       <---------AHL20(2)        <---------GLK1(2)                                                        --------->AHL20(2)       --------->RVE1(1)   <---------At5g28300                  <---------GLK1(1)--------->AHL20(1)    ---------->DOF2 --------->ANAC58               --------->ICU4               --------->AHL20(2) ------------>ANAC81--------->ANAC46     <<<<<<<<<<<<<<<<<LFY   --------->GLK1(1)<---------AHL20(1) ----MYB52(2)       --------->ANAC58  <---------YAB1          <------ZmHOX2a(1) <---------AHL20(2) <-   aacaaaaaaagatcctttctccaagcatttactgtggattacaatacaatgggatgatgaggcaggatttcaaaattcgaaattaaatttgaagtctctg  22704000                                                                                           --------->YAB1                                                                                           <---------ICU4                                                                                          <---------YAB1                                                                                     --------->WOX13(1)                                                                                    --------->MYB46(3)                                                                                --------->MYB46(3)                                                                            ------>ZmHOX2a(2)                                                                            <-------TEIL--------->YAB1                                                                           <------ZmHOX2a(2)                                                                          <---------ARR14(2)       <-                                                                          --------->ARR14(2)  -------           --------->CCA1(2)                                         <------ZmHOX2a(1)  <---------ICU4 ----->HVH21                                                         ==============HOX2a_HOX2a<------ ---------DOF2  --------->At4g35610          <----------DOF2         =============HOX2a_HOX2a<-------   acttttgactgtgatataagctctctctctatctctctaatagacttctttctagcatctagcaatttgtaggagggatccatccatccatcatcatcat  22704100                                         <XXXXXXXXXXXXXXXXXXXXXXXMIR836                                         <---------CCA1(2)                                    <-------TEIL                                 <------MYB83                                 <---------ANAC58     <-----------RAV1(1)         <------MYB46(1)     <---------ANAC58            <---------ANAC58     <---------ANAC58           --------->MYB46(2)                                         --------->ETT(2) <----------DOF2                --------->MYB111(1)                            --------->ANAC46 --------YAB1        --------->ANAC58<---------ANAC58                          --------->ANAC58 -->YAB1             --------->ANAC58<---------ANAC46                          --------->ANAC58 ---ICU4             --------->ANAC46<---------ANAC58               ----------->GT1<---------At4g35610 --YAB1      --------->KAN4(2)  --------->MYB59      --------->ATHB12    ------->TEIL      <---------ETT(2)   catctttgtgtggctcattctcaacgctatagattaggtgcgtgtatcaaacgaagcattgggaatgagagagtgaatctcacgcttctgatgtcgagag  22704200                 ==============================HOX2a_HOX2a                 ------>ZmHOX2a(2)                         --------->YAB1                 <---------ATHB12               --------->ARR11(3)                    --------->bZIP60(2)         --------->ARR14(2)           <---------bZIP60(1)                       --------->ANAC46            ------->TEIL           <---------ANAC46                        <---------ALFIN1           <---------YAB1           --------->bZIP60(1)          ------>ZmHOX2a(1) <---------YAB1   <---------AHL20(2)   <----      --------->YAB1            <----------DOF2<---------ANAC58      --------->YAB1    <---------ALFIN1    <---------ZAT14         <----------DOF2    <---------ANAC58   <----------DOF2<---------ARR14(2)   tgagagaatagtgatgtgatctagtcaagactttctttgttcctcactggcttccacttcatcataagctttcaaaatttatgaatcccccaatctatct  22704300  Previous    Next  AGI:  At3g61310.1    Description:  DNA-binding family protein. similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT2G45850.1); similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT2G45850.2); similar to AT-hook DNA-binding protein [Gossypium hirsutum] (GB:ABO42262.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 22701571    to: 22703809    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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