Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ZAT14                                                    <---------AHL20(2)                                                    --------->AHL20(2)                     <---------AHL20(2)         --------->AHL20(2) ------->DOF2        --------->AHL20(2)         <---------AHL20(2)    --------->YAB1 -At4g35610         --------->AHL20(2)        --------->AHL20(2) <---------ATHB12    <---------AHL20(2) >At4g35610  <------ZmHOX2a(2)               <---------AHL20(1) --------->ANAC58    --------->AHL20(1) -->GT1     <---------ARR11(3)               --------->AHL20(1) --------->ANAC58    <---------AHL20(1) -ANAC46    --------->ARR11(3)              --------->AHL20(2) --------->WOX13(1)   <---------AHL20(2) --------------TaNAC69(2)--------->YAB1   --------->AHL20(2) --------->ZAT14        --------->AHL20(2)   aaaagagagagagagatcactatttaatcagaattcacattcaaaaatatatatataaatcactgcaatcaattgtattctaaaaatttattcaacgtag  22658700                                                               --------->ZAT14                                                               <---------ZAT18                                                               --------->ZAT18                                                               <---------ZAT14                                                           <---------ICU4                                                          --------->ICU4                                                        --------->YAB1          <----------DOF2                                                      <---------RAP2.6(3)      <---------ANAC58                                                   --------->ZAT14             <---------ANAC58              --------->ARR11(3)                   --------->ZAT18             <---------ANAC46            <---------YAB1                         <---------ZAT14         <---------ANAC58       ---           <---------TOE2(3)                       <---------ZAT18   <-------TEIL                 ---          --------->YAB1                     ----------->RAV1(2)  --------->At4g35610             ---        <---------WOX13(1)                <---------ATHB12<---------YAB1   <---------ANAC58     <----      --------->ATHB12       --------->MYB52(1)<-----------RAV1(1)<---------At4g35610        ------->GAMYB   taagtcaaagattgatgatatagtttgtggataacagaagacaaatcaactggtgcagtcataagtgcagatgcagaccgtgcttgtagtatcaacacac  22658800                                                              <---------DEAR3(1)                                                             <---------LBD16                                      --------->GLK1(1)     ------>ZmHOX2a(1)    <---------ARR14(2)                <---------CCA1(2)   <---------ANAC58     <---------ICU4    --------->ARR14(2)           <---------ZAT18          <---------ANAC58<---------ARR11(3)   <---------MYB52(1)            --------->ZAT18    <---------TOE1(2)     --------->ARR11(3) ------>ANAC58                 <-------MYC3   --------->TOE1(3)<---------ANAC46--------->YAB1 ------>ANAC46                 ------->MYC3  <---------HSFB2a(1)      ---------->DOF2 ------>ANAC58             <-------TEIL<-----------ARR10  ----------->RAV1(2) <---------YAB1<-------- -----ALFIN1       --------------->AtSPL8    --------->HSFB2a(1) ----------->GT1    --------->ZAT6   acgccgtttccaccatgctgcatagtacattcatgtgcgcatatcaaaccttcgcagttttcctgcggtgttaaaagataatcataacactgtttttctt  22658900                   <---------ALFIN1                   --------->AtMYB61                <-----------GT1               ---------->ID1           <----------DOF2         --------->AHL20(1)       --------->ARR14(2)          <---------AHL20(2)    <---------ANAC58   --------->TOE2(3)                       <---------YAB1 --------->DAG2    <---------ANAC58 ------>MYB46(1)   --------->AHL20(2)   <----------DOF2 ---------->DOF2    <---------ANAC46 ------>MYB83  --------->AHL20(2)       --------------->AGL15   <---------MYB46(3) ---GT1<---------ARR14(2)         --------->AHL20(2)        <---------------AGL15--------->ALFIN1   ctccttgcgtttcctttgtcaccatccctaatacaaaaaaattaaaacatagtctcagtttccttttgatagaaaaataaaaggtgttgttgaagaaaaa  22659000                             --------->ARR11(3)                             <---------ARR11(3)                             --------->AHL20(1)                        ----------->GT1                      <-------MYC2                      <-------MYC3                      ------->MYC2                --------->ANAC55(1)                <---------ANAC55(2)                --------->ANAC55(2)                --------->ANAC58                             --------->TOE1(3)                --------->ANAC58                             --------->TOE2(3)                --------->ANAC46  <---------AHL20(2) --------->DAG2           ---------->DOF2   --------->ICU4    ----------->GT1                    <---------YAB1           <---------ICU4    <---------AHL20(1)<---------ANAC55(2)              ---------->DOF2        --------->YAB1------->MYC3--------->AHL20(2)---------->DOF2     --------->SPL7              <   <---------YAB1    <---------ANAC46          <---------ANAC46        <------ZmHOX2a(1)            <   ctagtatgaataataaagacggaacgtggaaaatattaaaatatgtgttatgtataaagcaaacctaaaacgaggacgaccataaagatagcaagagtga  22659100                                                                              ------->MYC2                                                                              ------->MYC3                                                                              <-------MYC3                                                                              <-------MYC2                                                                             <---------TGA1a                                                                             --------->ANAC55(2)                                                                             --------->TGA1a                                                                             <---------O2                                                                             <---------ANAC55(2)                                                                             --------->O2                                                                           <---------ALFIN1                                                                          <---------REM1(2)                                                                   --------->ARR11(3)                                                                  <---------ICU4              --------->YAB1                                      -------->HAHB4             <---------YAB1                                       --------->YAB1         <---------YAB1                         --------->At4g35610<---------ARR11(3)            ----         --------->ICU4                --------->YAB1            <---------YAB1                  <--- <----------DOF2                   --------->ICU4                --------->ICU4         <-----------TBP ---------ANAC58         ------->GAMYB<---------YAB1------------>CBF   --------->At4g35610      ----- ---------ANAC58      ----------->RAV1(1)  --------->YAB1    <---------ZAT14 --------->ANAC46   <----   tggctttagtcatttttgataatacaacagaaatgaaattatcaaaaataagatgacaatgagtgtaatgatcatctacacgtgaatgtcatatataaga  22659200                                              --------->ARR11(3)           <---------------AGL15       --------->AHL20(2)           --------------->AGL15       <---------AHL20(2)      --------->GLK1(2)            --------->AHL20(2)                                   ----------->GT1      --------->ARR11(3)         --------->ANAC58                                      --------------      <---------ARR11(3)         --------->ANAC58                                      <-------------     <---------GLK1(2)           --------->ANAC55(1)                                 <---------ARR14(2) ----->GLK1(1)                   --------->ANAC46                              --------->DAG2 ------GLK1(1)                   <---------ANAC55(2)                      --------->TOE2(3) ---->ARR11(3)                   --------->ANAC55(2)                   --------->AHL20(2)      ------ -----ARR11(3)    ----------->GT1----------->GT1             ---------->DOF2  ---------->DOF2 -------   tatcacaaaatctctaaaattagttaaaaatcaacaagtaattaagtagatgttgtattcaaacaaagagaaattaacttaaaagtggaaacgtataaaa  22659300               <------ZmHOX2a(2)        ---------->DOF2                                                               --------->ALFIN1  ---------->DOF2              <-----------GT1                                      --------->ALFIN1 ---------->ANAC81     <---------YAB1                                             <---------ANAC58 ----------TaNAC69(2)<-----------GT1          <-------GAMYB--------->YAB1         <---------ANAC58 --->DAG2     --------->ARR11(3)  --------->YAB1 --------->KAN4(2)                <---------ANAC46 --->DOF2     <---------ARR11(3)-------->P   ----------->GT1         ----------->RAV1(1)     --------   gtggaaaagagaaagagatcatattacgattatctaccatactaatgtggttattctgtaatcgtaagtagcaacaagagagaagcgtgtggaagtagtt  22659400                                            ----------->RAV1(1)                                     ---------->DOF2        <---------ETT(2)                             <---------MYB52(1)           --------->REM1(2)                            ------>NtERF2  <---------ETT(1) --------->ETT(2)          <---------ETT(2)     ---------->DOF2      <---------RAP2.6(2)          <---------ANAC58             --------->REM1(2) ----------->GT1    --------->ICU4<---------AHL20(2)   <---------ANAC46          <---------ANAC46  <- --->GT1     ---------->DOF2<---------RAP2.6(3)        <---------ANAC58 <-----------GT1            <-   aaactgttaaaggcttaaagccaatattgccgctattttaaaagtccgacaaaacttccttgtagacaacatttctacagtttatgtgtagacaaatggc  22659500       --------->ANAC46                                                                    <---------ZAT18    <---------WRKY12                                                                       --------->ZAT18    <---------WRKY38(1)                                                           <------ZmHOX2a(1)   <------ZmHOX2a(2)                                                             ----------->GT1  <-----------ARR10                          ----------->GT1                 --------->ALFIN1 <------ZmHOX2a(1)               --------->ARR14(2)                   --------->ALFIN1     --------->ZAT14 --------TOE2(3)                 <---------GLK1(2)            <---------ATHB12 <------ZmHOX2a(1) --------TOE1(3)                 <---------ARR14(2)           --------->ICU4<------ZmHOX2a(1)   taaggatcaacgcgacttgccctctccaaattccatattctcaaaaatggtgaacatagtggcaatgagcaagtgtgaggaggaggaaatttgtgctctc  22659600  Previous    Next  AGI:  At3g61180.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G11680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24376.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 22656541    to: 22658642    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g61182.1    Description:  LCR54 (Low-molecular-weight cysteine-rich 54). Identical to Putative low-molecular-weight cysteine-rich protein LCR54 precursor (LCR54) [Arabidopsis Thaliana] (GB:P82768); similar to LCR30 (Low-molecular-weight cysteine-rich 30) [Arabidopsis thaliana] (TAIR:AT3G43505.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 22658746    to: 22659113    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version