Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->AHL20(2)                            <---------ICU4                            <--------ATHB1                            --------->YAB1                            <---------AHL20(2)    <---------At4g35610     <---------AHL20(1)                                               --------   --------->ARR11(3)      <---------ATHB12                                         <<<<<<<<<GATA-1   <---------ARR11(3)      --------->ICU4                                    <---------GLK1(2) ---AHL20(2)               <---------ATHB51                                  --------->ARR11(3)    -- --AHL20(2)              --------->YAB1         <------------CBF       <---------YAB1    --------->AHL20(2) ->AHL20(2)   ----------->TBP           ----------->GT1          <-------TEIL<---------ARR11(3)  ----   taagagagcttctcttatatatacaactaataattttaaaatttgtaatacattgaatggtccaaggtgcattctcatagatttttatctataaaatata  22656100                   --------->ARR11(3)                   <---------ARR11(3)              <---------AHL20(2)                                                      --------->WOX13(1)              --------->AHL20(2)                                                     <-------TEIL    --------->AHL20(2)                                                               ------>ZmHOX2a(2)    <---------AHL20(2) <-----------GT1                                              <------ZmHOX2a(2) ->AHL20(2)----------->GT1                                                         <---------ARR14(2) ------->AHL20(2) --------->YAB1                                                   --------->ARR14(2) ------->GT1 <---------MYB52(1)<---------YAB1                <---------ICU4       <------ZmHOX2a(1)   tgtaaataaaatccagttaattatcttacaattctgattttcatgtacaataagttggattaatctttaaaaaataagttgtaaggatccatcaaataat  22656200                    --------->ARR14(2)                    <---------ARR14(2)               --------->ANAC58                                  ---------->DOF2               <---------ANAC55(2)                            --------->TOE1(3)               --------->ANAC58                      <---------AHL20(2)           --------->YAB1                       --------->ARR11(3)          <---------YAB1                        <---------ARR11(3)            ---------->DOF2    ----        --------->YAB1                         <<<<<<<<<RAP2.2--------->TOE2(3)--------->DAG2 -------   ccccttctaactataatacgcatatttggagtttaaactctcaaaatttagatattgaattgagccttaaacctcgaaaataaagtatgtctactacaat  22656300                                                                             <---------HSFB2a(2)                --------->TOE1(3)     <---------------AtSPL8                 --------->HSFB2a(2)          --------->CCA1(2)        --------->ALFIN1                       <----------DOF2   --------- <---------AHL20(2)  --------->YAB1<---------ANAC46                       ------>ZmHOX2a(1)--------->ARR11(1) ----->YAB1     --------->TOE2(3)<-----------RAV1(1)               ---------->DOF2         <---------ARR11(3) -->YAB1<<<<<<<<<RAP2.2   --------->ZAT6  <-------TEIL      --------->AHL20(2)      --------->AHL20(2)   gatataatttagatataaacttaacataacacaaattgtgggggtacaaaaaatgttagcaaaaatataaaaagtccttttggaaaataaaaagatttga  22656400                                    --------->LBD16                                   --------->HSFB2a(2)                                   --------->LBD16                                   --------->ANAC46                                       <---------ARR11(3)                                   <---------HSFB2a(2)                                  --------->ANAC58                                  --------->HSFB2a(2)                              <----------ARF1                     <---------AHL20(2)                                            XXXXXXXXXXXXXXXXXX                     --------->AHL20(2)                         <---------ARR11(3) <----------ID1                  ------->TEIL    <---------LBD16             <---------YAB1  <------------CBF               --------->ANAC55(2)<---------HSFB2a(2)       --------->YAB1   --------->ATHB12     --------->TOE2(3)           <---------LBD16     --------->ZAT14      --------->TOE2(3) >CCA1(2)<---------TOE2(3)  <---------GLK1(2)        <---------ZAT14     ----------->GT1--------->ANAC58   gcaactacattaagtttatgtatttttttagaatttcccggaagaataaaactactgtagtctcatgatatcaaaacgtttattggggacaagacattct  22656500                                                                     <---------ETT(2)                                                                     --------->ETT(2)                                                             --------->ANAC58                                                             --------->ANAC46                                                             --------->ANAC58                                                             --------->LBD16<---------GLK1(1)             <---------ATHB12                    --------->YAB1 ---------->DOF2           --------->WOX13(1)            *TSS--------->TOE1(2)--------->LBD16         <---------ARR14(2)         ------------>CBF              --------->ANAC46 <---------ALFIN1    --------->GLK1(1)    <---------MYB52(1)                --------->HSFB2a(2)   <---------LBD16--------->ARR14(2)     <-- ---------->ID1     <---------MYB52(1)------>ZmHOX2a(1)--------->MYB46(3)  <---------ARR14(2)    ---- XXX>MIR447A/B <-----------GT1        <---------HSFB2a(2) --------->ANAC46 <---------GLK1(2)     <---   cttgtcgttttgtcaattatccattagatagaaactggtcctcgaaacctagaatcatccaccccgcaaagtcgacagatttccagcgaattcaaacccg  22656600           <---------HSFB2a(2)                                                              ------>NtERF2           --------->HSFB2a(2)                                                          ----------->HVH21          <---------LBD16                    <---------YAB1                  <---------ARR14(2)        <---------ARR14(2)             <---------ATHB12                      <---------ARR11(3)        --------->GLK1(2)         <------ZmHOX2a(2)                          ------->TEIL------>NtERF2       <---------GLK1(2)          --------->CCA1(2)                          <-----------ARR10       <---------ARR14(2)        --------->ARR14(2)             <------ZmHOX2a(2)       --------->DEAR3(1)       --------->ARR14(2)        <---------ARR11(3)         <---------ATHB12 <---------ARR11(1) ----ZmHOX2a(2)                  <---------ARR14(2)       --------->WOX13(1) --------->ARR14(2) ----->ARR14(2)   -------->P     --------->AGP1 <---------WOX13(1)          <---------CCA1(2) ------ARR14(2)<------ZmHOX2a(2) --------->ARR11(3)    ------->TEIL         <---------ARR14(1)   atccatcgagattctggatcaacccgattacccaagatccaatctttctaattgatgaatcaatcgatcccttctaccgtatcttcttctccgacgactg  22656700                                                                           <---------DEAR3(1)                                                                           --------->DEAR3(1)                                                                           <---------ANAC46                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                          ------>NtERF2                                               --------->ANAC46           --------->RAP2.3(1)                                         --------->DEAR3(1)              <---------ATERF1(1)                                        --------->DEAR3(2)              <------NtERF2                                      --------->MYB52(1)                --------->ATERF1(1)                                      --------->ARR14(2)                <---------DEAR3(1)                                      <---------ARR14(2)               ------>NtERF2                                     ----------->HVH21                 <---------LBD16                                   --------->ANAC58                   <---------ANAC58              -                                   <---------ANAC55(2)                <---------bZIP60(2)         ---                                   --------->ANAC46                   <---------ANAC58            ---                               --------->MYB46(3)                    <------NtERF2             ------                         <---------LBD16--------->MYB46(3)       <---------ANAC58           <--------                  <----------DOF2  --------->ANAC55(1)           <---------ANAC58           ---------                <---------At4g35610--------->ANAC58             <-------TEIL------>NtERF2   <--------                ------>NtERF2  --------->DEAR3(2)    ------>ZmHOX2a(1)<---------ANAC46      <--------               --------->DEAR3(1)  --------->ANAC55(2)    --------->At4g35610             ------>NtERF2        <---------HSFC1(2)  <------NtERF2------->GAMYB    <---------At4g35610<------NtERF2--------->LBD16        <---------HSFB2a(1)<------NtERF2<------------AtMYB77  --------->ARR14(2)         --------->DEAR3(1)        --------->HSFC1(2)--------->RAP2.6(2)<---------ALFIN1 <---------ARR14(2)         --------->ANAC46        --------->HSFB2a(1)--------->LBD16  --------->DEAR3(1)<---------GLK1(2)         <---------LBD16   atacgatggacgcttcgccgcttcttggccggaacagacgtaaccgcccacggtcctctcagccgattcgtggcgcggcgtcgagacttctccgccgtgc  22656800                                                     <----------CDC5                                                    --------->At4g35610                                                    <---------ZAT2                                                    --------->ZAT2                                                    <-------GAMYB                                                    --------->ATERF1(1)                                                    <------NtERF2                                                    <---------At4g35610                                                   <---------ERF1                                                   <---------MYB46(3)                                                   <---------RAP2.3(1)                                                  <---------RAP2.3(3)                                                  <---------RRTF1(2)                                                  <---------ANAC58                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------DEAR3(1)                                                  <---------RAP2.6(2)                                                  --------->ATERF1(2)                                                  <---------ATERF1(2)                                                 <------NtERF2                                                 --------->ATERF1(1)                                                 --------->RAP2.6(3)                                                <---------ATERF1(1)      <---------LBD16                          ----------->HVH21     --------->MYB52(1)                        --------->ALFIN1    ------->GAMYB                              <---------DEAR3(1)    --------->DEAR3(1)                       <---------ANAC46   --------->DEAR3(2)                        <---------TGA1a   --------->ATERF1(1)                       --------->At4g35610   <------------AtMYB77                      ===================MYC_MYB   <---------MYB55(2)                        <---------bZIP60(2)   --------->MYB46(3)                        <---------O2             --------->ANAC58  -------->P                    <---------MYB52(1)<---------RAP2.3(2) --------->ANAC58 -------->MYB46(3)             <---------SPL7<---------At4g35610    --------->MYB52(1) ------>ANAC58       <---------MYB52(1)     <---------AtMYB61       <---------ARR14(2) ------>ANAC58      --------->LBD16       <---------MYB52(1)        --------->ARR14(2) --->ZAT2           <-----------HVH21    <-----------HVH21  --------->ZAT2 <------NtERF2 -ANAC46           <---------ANAC58     <---------ANAC55(2) --------->At4g35610 >DEAR3(1)         <---------ANAC46     <---------ANAC58 <---------At4g35610   <---------WRKY38(1) -ANAC58           <---------ANAC58     <---------ANAC58 --------->At4g35610   <---------WRKY12 -ANAC58--------->LBD16    ------------------>SPL14------>NtERF2   <------ZmHOX2a(1)      --------->ZAT6   tagcaaccgccggatgatgctccgtgagccctccgttcgagtccgtgaggtggcggctgagcagcttgaggaacggcagagtcaatgggcttactctaaa  22656900                                                                                                <----                                                                                   ==================                                                                                   ------>ZmHOX2a(1)                                                                                 ==================HOX2a_HOX2a                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                                ===================HOX2a_HOX2a                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                               --------->ARR11(3)                                                                               <---------ARR14(3)                                                                               --------->ARR14(3)          <---------HSFB2a(2)                                                  <---------ARR11(3)          --------->HSFB2a(2)                                                ----------->ARR10  <----    <---------YAB1                      <---------WOX13(1)              <---------At4g35610     <----  --------->YAB1                     <---------YAB1                    <---------YAB1       ------>ZmHOX2a(1) <---------YAB1                ------>ZmHOX2a(1)       --------->GLK1(2)--------->At4g35610 =========   cccattatagttctcgatatactttggaatttcctatttgtgattgtttcaatcgcgattctagggtttagttctgatgaagatcctgatgttcctctta  22657000  Previous    Next  AGI:  At3g61180.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G11680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24376.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 22656541    to: 22658642    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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