Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------YAB1                                                                                <---------AHL20(2)                                                                               <---------AHL20(2)                      <-------TEIL                                          --------->AHL20(2)                 <-----------GT1 <---------TOE1(3)                         <---------YAB1             --------->AHL20(2)  <---------TOE2(3)                      --------->AHL20(1)             <---------AHL20(2)  <---------YAB1                         --------->AHL20(2)       --------->AtLEC2       --------->ICU4       --------->ANAC58     <---------AHL20(1)       --------->ANAC46    --------->AHL20(2)      --------->ANAC46--------->AHL20(2)       --------->ANAC58 ------->TEIL               --------->ANAC58<---------AHL20(1)            ----       --------->ANAC58<---------AtLEC2    --------->ICU4          <---------AHL20(2)    <---------YAB1   <-----------GT1   --------->AtLEC2    ---------->DOF2 <----------DOF2<---------AHL20(2)   ------>ZmHOX2a(2)   acatttaacatgcaattttttacatgcatgtaattaagattagaaaagattgcaagaaacttttgctattttattttattatttattgttgatgatcgtt  22652700                                                    <---------ICU4                                                   <---------YAB1                                                  --------->ARR11(3)            <---------DOF5.7(2)                                                  <---------ARR11(3)            --------->MYB52(1)                                           <---------HSFB2a(2)                 <---------WRKY12                 --------->ANAC58       <---------ARR11(3)                     <---------WRKY38(1)                 --------->ANAC58       <---------ARR14(2)            --------->ARR11(3)           <----------ID1   --------->AHL20(2)---------->DOF2         <---------ARR11(3)    <---------------------WRI1          --------->ARR14(2)          <---------AHL20(2) ----->AHL20(2)---------->DOF2   --------->YAB1  --------->YAB1    --------->AHL20(2)   tatatagtagataagaacaaagcaaaacaaaaaaatcatcaagttctgcaaagataattgcagaggcaaataaatcttttgtcaacggttttatagcact  22652800                   <-----------HVH21                                                                <                <---------ANAC58                                                                   <-                <---------ANAC58                --------->YAB1                                     <-            <---------At4g35610              --------->REM1(1)                                <------        --------->AtLEC2              ------->MYC3                      --------->At4g35610   <------      <---------ANAC58                <-------MYC3                  --------->ARR14(2)        <------      <---------ANAC46                ------->MYC2                  --------->GLK1(2)      ------>ZmHOX2a(1)      <---------ANAC58                <-------MYC2<---------YAB1    <---------ARR14(2)    <---------ANAC58   <---------ARR14(2)                <-----------RAV1(1)           <---------GLK1(2)      <---------ANAC58   --------->ARR14(2)              <---------AtLEC2           <-----------GT1      <-----------RAV1(1)   ggccagttccttgcaactgcttgtcacagagacttgtgcatgtggctccatcacaattgttgtttaacagaatctgatgacatatatgttgtccttgcgt  22652900                                                                                      <XXXXXXXXXXXXXX                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                             <---------AHL20(2)         <---------ICU4                                                  --------->AHL20(2)        <---------ATHB12                                                 <---------AHL20(2) ----------DOF2                                                         <---------AHL20(2) --------ANAC58                                                         --------->AHL20(1) --------ANAC58                   --------->TOE2(3)            ----------->GT1  <---------WOX13(1) ---ANAC58              --------->AHL20(1)                     <---------ANAC55(2)<---------AHL20(2) ---ANAC58              <---------AHL20(1)             --------->YAB1   <---------AHL20(1)          - ---ANAC46              <---------ARR11(3)         ---------->DOF2      --------->AHL20(2)   --------   ttctttcgccatcatccctaaaacaatatttttaaacatcaaatttcaatatacaaagcataaaaacgtgaaaatttatttgattaatttgttaatggtc  22653000   --------->AHL20(2)   --------->YAB1                                   --------->YAB1                             <-----  <---------YAB1                                   <---------ATHB12                            <----- XXXXXXMIR827                       --------->TOE1(2)                     --------->ZAT14     ------- -------->YAB1                      --------->TOE2(2)  <---------At4g35610<---------ZAT14 <---------YAB1 ->YAB1                 ----------->GT1 <------ZmHOX2a(1)    <<<<<<<<<<<<<<<<<LFY  <----------DOF2   atttataatatagttagagaatggaaatgtaaaacaaacctaggaagaagacaatgaagatgacaacattggtgagtttactcatctttttgatgatata  22653100          <------MYB83        <--------P       <-------GAMYB                        --------->TOE2(3)      <------MYB46(1)                     <---------ARR11(3)      <------MYB83                        --------->ARR11(3)                            <---------ARR11(3)      <---------MYB46(3)                 --------->RVE1(1)                              --------->ARR11(3)     <---------AtMYB61               --------->AHL20(2)                               --------->ICU4  --------->ARR14(2)    --------->ARR14(2)<---------AHL20(1)                       --------->AHL20(2)  <---------ARR14(2)    <---------ARR14(2)--------->AHL20(1)                     --------->AtLEC2 <------ZmHOX2a(1)     <------ZmHOX2a(1) --------->CCA1(1)                       ----------->GT1    < ----YAB1 <------MYB46(1)       --------->ARR11(3)                          ----------->HVH21       < ----AHL20(2)      ---------->DOF2 <----------DOF2                     <---------AHL20(1)           - -->AHL20(2)  ---------->DOF2   <---------ARR11(3)             <-----------TBP <---------ANAC46   <--   ataggatttggttggaaaaagaaaaggatttgaagttcttttaatatcttaaacaaaatgagggtatttgtaatatatgtgacatgtaaatatcatctct  22653200                                                                                          <---------YAB1                                                                                          --------->ICU4                                                                                       <---------YAB1                                                                                     --------->YAB1                                                                                <---------ATHB12                               --------->O2                                    --------->ANAC58          ------->TEIL         <---------ANAC58                                --------->ANAC58    <-----------GT1            <---------ANAC58                               --------->WOX13(1)   -- -----------TBP                --------->ANAC55(2)         --------->ANAC58 ------------>CBF     ---- ---------AHL20(2)     <---------ANAC58            --------->DAG2          --------->ANAC58   ------- -------->AHL20(2)     <---------ANAC58           ---------->DOF2        ---------->DOF2--------->YAB1 ---------TBP          <---------ANAC46    ----------->GT1 --------->ANAC58--------->ANAC58<---------ICU4   atatatatactgtatgtgtgaagttgtgtgtctacgtgtctaatatagcaaaaaaagttggacgcatttgatttggaaagcaatcaagtatgataattag  22653300                                                                                           --------->WOX13(1)      --------->YAB1                                    --------->ATHB12                --------->ANAC58     --------->AHL20(2)      --------->YAB1    ----------->GT1                          --------->ANAC58 --------->AHL20(2)         <-------TEIL     ---------->DOF2                          ---------->DOF2 --------->GT1    <-----------GT1         ----------->GT1                          --------->HSFB2a(2) ------>DOF2     --------->AHL20(2)       --------->ANAC58                         <---------HSFB2a(2) -->YAB1    --------->AHL20(2)            --------->ANAC58               --------->At5g28300   aaagaaaataaaaatcaaataaactatacattcataagatggacaagtaaagagaaaatgaatgggaactatggcagtaagtgttttagaaagcaatctg  22653400                                                                                           <---------YAB1                                        --------->AHL20(2)                               --------->CCA1(2)                                  --------->HSFB2a(2)                                   --------->ARR11(3)                               <----------DOF2                                        ----------->ARR10     --------->AHL20(2)        <---------DAG2                                     --------->YAB1     <---------AHL20(2)     --------------->AGL15                       --------->ZAT14 <---------ARR11(3)   --------->YAB1          ----------------->AGL2   <---------YAB1      <---------ZAT14 --------->ARR11(1)   ttcaaatataaatagaattgaattcaaaaaccacttttagaatgaaataaacttttgattcaaatgccatctactgtagttcaacaataagatatgatag  22653500                                      ----------->RAV1(1)                                      ------>MYB46(1)                                    <---------MYB59                                    --------->MYB46(3)                                ----------->HVH21                              <---------At4g35610                              --------->At4g35610                             ------->TEIL                             <---------ARR14(2)                             <---------ARR11(1)                             <-----------ARR10                             --------->ARR14(2)                            <---------CCA1(2)                            <---------ARR14(1)                           --------->LBD16                                          <---------AHL20(2)                          --------->ANAC55(2)                                     <---------AHL20(2)                          <---------ANAC58                                       --------->ARR11(3)                          <---------ANAC58                                       <---------ARR11(3) <                          <---------ANAC55(2)                                    <---------AHL20(1) -              <-----------GT1--------->GLK1(2)   --------->ATHB12              ------->TEIL         -          <----------DOF2<---------LBD16 --------->TOE2(3)               ------->TEIL             ---  --------->TOE2(3)    <-----------GT1------>MYB83                   <---------TOE2(3) --------->AHL20(2)   aaaaccttttttcttttaactcgattttccgtatctgacccaacatcaaaaccattggatttgatttagttaatgaatatgtatatatttttaatataag  22653600  Previous    Next  AGI:  At3g61172.1    Description:  LCR8 (Low-molecular-weight cysteine-rich 8). Identical to Putative low-molecular-weight cysteine-rich protein LCR8 precursor (LCR8) [Arabidopsis Thaliana] (GB:P82723); similar to LCR6 (Low-molecular-weight cysteine-rich 6) [Arabidopsis thaliana] (TAIR:AT5G47077.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851) Range:  from: 22652739    to: 22653085    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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