Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------------->AtSPL3                                      <---------------AtSPL3                                      --------->MYB59                                   <----------DOF2--------->ANAC46         --------->ZAT18       <-----------------AGL1 -------GT1            --------->AHL20(2)       <-----------GT1 ---->ANAC46    ----------->GT1<-----------------AG  --------->AtLEC2                        <-------TEIL >YAB1   <---------ZAT18   --------->YAB1 <-------TEIL           --------->YAB1  <---------ICU4   acaacttcttgttcgctatggaaaataaaacataactctttaggtacgattcacgatgcaaaaacaatagtcatcgtgaataaacatgtccgaaatacat  22641200                                                          --------->GLK1(2)                                                         <---------GLK1(2)                                                  --------->MYB52(1)                                                 ------->GAMYB                                   ----                                                <---------MYB52(2)      --------->YAB1          -----                        <---------ATHB12        --------->MYB46(3)     --------->ICU4--------->GLK1(1)  <-----------GT1   --------->MYB46(3)          <---------MYB55(2)     <---------ATHB12      --------   gaattaacaaatgaaacgctcaacaaatgaattgacaaatgaaacgctcaacaaacgaagaatctcacatcccatgatgaaattgggatttacaaataaa  22641300                                                                                                  ---                          --------->At5g28300                       --------->ZAT18              ---- ----->DAG2              ----------->GT1                            <---------ZAT18---------->DOF2--- ----->DOF2        <--------P          ---------->DOF2    <---------ALFIN1<---------YAB1         <--- ->AHL20(2)      ----------->GT1   ---------->DOF2     <-----------GT1  <----------DOF2        ------   aagtagcacaagaagaagggggtagaacagtaattttaaaagaaagacagcgttgattcaccacttgaagtggacttttatagcaaaaagagttgagtaa  22641400                          <---------TOE2(3)                                     <----------DOF2                   <---------DAG2                                            ---------->ID1              <---------MYB59                                               <-----------GT1             --------->ANAC46               <---------AtLEC2           <---------DAG2 ------>TOE2(3)    <----------DOF2      <----------DOF2            ---------->ID1 ------->GT1 --------->ANAC58           --------->GLK1(1)       <----------DOF2 ------>ZmHOX2a(1) ------>TOE1(3) ------>MYB83           <---------ANAC58         <------------------------ANAC81 ------bZIP60(1)------>MYB46(1)        <---------ANAC58<---------ARR11(3)  <-----------GT1        <-- --->MYB52(1)--------->ANAC58   <---------ANAC46    <---------ALFIN1   <----------DOF2          <----   cgtcaaaagagtcaaacccaacttttcaaaggttgtgtaaggctttccatgactccacatcttcttcttttccctttttatccttttctcttctctctct  22641500                             --------->ANAC55(2)                             --------->ANAC46                             --------->ANAC58                      <---------AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)                      <---------DAG2                     <---------AHL20(1)               <---------ARR11(3)                           <-        <----------DOF2    <-----------GT1            --------->ARR11(3)           *TSS  <----------DOF2     <-----------GT1--------->AHL20(2)               <---------CCA1(2)    <---------YAB1<---------DAG2   <---------AHL20(2)--------->AHL20(1)         <----------DOF2        <---------MYB52(1)<---------DAG2 -------AHL20(2)    <---------AHL20(2)         <---------DAG2<----------DOF2       ------>ZmHOX2a(1) ------DOF2   ----------->GT1--------->ANAC58--------->GLK1(2)      ---------->ID1 <----------DOF2<--   tttattttttcttttgaagtaaattaatttcacgaaacaaatcagagaaccttttatatcttcctttttcgtcgttactatcgtcctttacctttttcat  22641600                                                               ---------->DOF2                                                            ----------->RAV1(1)                 <----                                                      --------->DEAR3(1)                        -----                                                     --------->ANAC58                          <-----                                                     --------->ANAC58                          ------                                                    ------->TEIL                              <------NtERF2                                                 --------->ANAC58                           <--------  --------->ZAT14             <---------CCA1(2)  --------->AtLEC2                           <-------- --------At5g28300         --------->ZAT6        --------->ANAC58                           <-------- ---------GT1        --------->ZAT6  <---------------AGL15 <----------ID1  <----------DOF2 <---------LBD16   ttactgttctctctctctctctatctctatctctatcttctattcatggacatgcaccgaagcgacaaagcttagggcttttctctcatccatggcggat  22641700      --------->YAB1                                                  <---------ZAT2   <---------CCA1(2)<-----------GT1                                   --------->ZAT2 -----GLK1(1)      <-----------GT1 <---------ARR11(3)                --------->ALFIN1 ---->GLK1(1)   <---------ICU4  <---------AHL20(2)                <---------DEAR3(1) ----ARR14(2)   <---------AHL20(2) --------->ARR11(3)           ------>NtERF2 --->ARR14(2)<---------AHL20(2) --------->AHL20(2)             ----------->HVH21 -ANAC46    --------->AHL20(2) --------->YAB1                  --------->DEAR3(1)                   - -ANAC58  --------->TOE2(3)   <---------YAB1               --------->HSFB2a(2)                <------ -ANAC58<---------YAB1    <----------DOF2   ------->TEIL   <---------HSFB2a(2)   ---------->DOF2    -   ttcttctatcttcattaaatatttccctctttattaaaatctcatgaatttcaacggttttctcgacgacggtgctggagcctcaaagctactctctgat  22641800                                                      ------>NtERF2                                                     <---------ATERF1(2)                                                     --------->RRTF1(3)                                                     --------->RAP2.6(2)                                                     --------->DREB2C(2)                                                     --------->DEAR3(1)                                                     --------->RRTF1(2)                                                     --------->ATERF1(2)                                                     --------->RAP2.3(2)                                                     --------->RAP2.3(3)                                                    --------->ERF1                                                    --------->DEAR4(2)            <---------ALFIN1                        --------->ORA47(2)           --------->MYB46(3)                       --------->RAP2.3(1)          -------->P                                --------->ATERF1(1)         ------->GAMYB                              <------NtERF2        <---------MYB55(2)                          --------->RRTF1(1)        <---------MYB111(2)                         --------->RAP2.6(1)        --------->MYB46(3)      <---------ETT(2)   <---------RAP2.3(1)    --------->SPL7            --------->LBD16      <---------DEAR4(2)    >>>>>>>>>SPL7            --------->DEAR3(1)   --------->DEAR3(1)    >>>>>>>>>SPL4            <---------ANAC46    --------->ATERF1(1)  --------->LBD16          --------->LBD16       <---------ABI4(2)  <---------SPL7           ------>NtERF2 <---------ZAT2 <---------ANAC46         --------->DEAR3(1)    <---------ATERF1(1) -------------->AtSPL8    --------->ANAC46 <---------LBD16       ------>ZmHOX2a(1) ---At4g35610       <----------DOF2--------->ANAC46<---------ATERF1(1) -------------->AtSPL3   <---------LBD16 --------->ZAT2<------NtERF2            <----------DOF2   gctccgtacaacaaccacttctctttctccgccgtagacaccatgctcggaagcgccgccattgctccttctcagtctcttcctttctcttcttcaggcc  22641900                 <---------ZAT18                 --------->ZAT18                                                                  ---               --------->At4g35610                                                             ------               <---------At4g35610                                    --------->GLK1(2) <---------At4g35610          --------->ANAC58    <----------DOF2      <<<<<<<<<TBF1  --------->YAB1        --------->At4g35610          --------->ANAC58  ------>ZmHOX2a(1)   <<<<<<<<<TBF1    <---------YAB1         <------NtERF2   tctctctcggactcgtaagctcactatctcctcttttaatcttcgatttcttcttcttctactacttatgataatctctgtaaatttggcagcaaacaaa  22642000                                                                                 ----------->HVH21                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                               --------->CCA1(2)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                              <---------AGP1                                                                              --------->AGP1                                                                             <---------CCA1(2)                                                                       ---------->DOF2          ----------->ARR10         --------->ANAC46              <---------REM1(1)     --------->ICU4                 --------->ANAC58             --------->ARR11(3)---------->DOF2   --------->CCA1(2)   --------->ICU4--------->TOE2(3)     ============================HOX2a_HOX2a -------->GT1          --------->GLK1(2)                   <------ZmHOX2a(1)----------->ARR10       - --->MYB52(1)--------->MYB52(1)     --------->ANAC58       ===========================HOX2a_HOX2a   <   tggagaaatgagtagaaacggagagattatggagtcaaacgtaagtcgtaagagtagtagaggagaagatgtagaaagcagatctgaaagtgataacgct  22642100  Previous    Next  AGI:  At3g61150.1    Description:  HDG1 (HOMEODOMAIN GLABROUS1); DNA binding / transcription factor. similar to ATML1 (MERISTEM LAYER 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G21750.1); similar to ANL2 (ANTHOCYANINLESS 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G00730.1); similar to ATML1 (MERISTEM LAYER 1), DNA binding [Arabidopsis thaliana] (TAIR:AT4G21750.2); similar to baby boom interacting protein 2 [Brassica napus] (GB:ABA70760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61351.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24379.1); contains InterPro domain Homeodomain-related; (InterPro:IPR01228 Range:  from: 22641583    to: 22646098    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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