Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------------AGL15            <---------ARR14(2)                                              --------------->AGL15            --------->GLK1(2)                                           --------->ARR14(2)            --------->ARR14(2)                                          <---------ARR14(2)        --------->YAB1                                                 <------ZmHOX2a(1)   --------->AHL20(2)                                       <------MYB83<---------GLK1(2) ----------- --------->ANAC58                                           <------MYB46(1)<-----------------AGL2 ----------->GT1                             ===============================================MADS_MADS --------->ANAC58                   <-----------GT1      --------->CCA1(2) ----------------->AGL3 --------->ANAC46  --------->AHL20(2)        <---------------AGL15<-----------GT1   <------ZmHOX2a(1)   tacaagtaaattagaatccgattaaaaaacttgaagtattacagtttctaaacagagagatttggtttttacaggattctaaataaggagaaaggtttca  22624600                                                                                ==================HOX2a_HOX2a                                                                                <------ZmHOX2a(1)                                                                             <------NtERF2                                                                          <---------LBD16                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                         <---------ZAT2                   <------ZmHOX2a(1)                                     --------->ZAT2   --------->ARR14(2)  --------->AHL20(2)                                       ------>ZmHOX2a(1)--------->LBD16<------ZmHOX2a(2)  <---------AHL20(2)     <------MYB46(1)            <---------YAB1     <-----------RAV1(2)<---------ARR14(2) >GT1 <-----------GT1    <------MYB83          <---------At4g35610     ---------->CDC5<---------At4g35610   aagttttattaccatgaaataggaatttggtgatggaacaagacgcttgagcttatgcttcctcttctcaagctcagccggaggattaagcagatcgata  22624700                                                                                               <-----                                        <-----------GT1                                        <-----                                       --------->AHL20(2)                         <---------ALFIN1         --------->GLK1(2)       --------->YAB1        <---------ICU4           --------->AtMYB61         ------->TEIL    --------->MYB46(3)<----------DOF2                      <---------ALFIN1        --------->ARR14(2)    <---------ICU4     <---------At4g35610            ------->GAMYB -------        --------->ARR11(3)    --------->YAB1    ------->TEIL                   --------->MYB46(3)        <---------ARR14(2)   --------->AHL20(2)<---------AtLEC2        ----------->HVH21<---------YAB1   tcgttttgaagaacctgttccatatcaacaaataataacaattaactttgcatctcatcagtactcaaatcaaatgacacaaccacacttctaattagct  22624800                                                                                              -------                                                                                        ------->GAMYB                                                                                       --------->MYB46(3)                                                                                     <-----------GT1                                                                                   ------>ZmHOX2a(2)                                                                                  --------->CCA1(2)                                                                                  <------ZmHOX2a(2)                                                                                 >>>>>>>>>GATA-4                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(3)                                                                                 >>>>>>>>>GATA-3                --------->LBD16                      ----------->GT1             --------->AGP1 ----ANAC58  <---------At5g28300              <-----------RAV1(2)                >>>>>>>>>GATA-2 ----ANAC58--------->DOF5.7(2)               <---------ATHB12                    >>>>>>>>>GATA-1  --- -->At4g35610<---------DOF5.7(2) <-----------GT1 <------ZmHOX2a(1)              --------->GLK1(1) ---   tacttcccatctcgttaccgtgattaaaacccttataacaaaatcaaatcaggagatgtaaatggagagcatccagtgcaagagatctaaccatcttcgc  22624900                               <---------MYB52(2)                               --------->MYB46(3)                           --------->STY1(2)                          --------->ANAC58                          --------->ANAC58                      --------->ANAC58                      --------->ANAC58                                                   --------->MYB52(1)                    ---------->DOF2                                <-----------GT1      --------->TOE1(2)                 <------NtERF2--------->ANAC58                  <---------ICU4 <-------GAMYB   <-----                ------>NtERF2 --------->ANAC46                  --------->YAB1 <---------MYB52(1)             <---------ATERF1(1)       ----------->RAV1(1)     <---------AHL20(2)      --------->MYB46(3)            ----------->HVH21 --------->ANAC58                 <---------YAB1 <---------MYB46(3) -->ANAC46--------->CCA1(2)<---------STY1(2)                 --------->YAB1  --------->ATERF1(2) ------>ANAC58 <---------DEAR3(1)   ------->GAMYB           <---------YAB1   <---------ATERF1(2)  --- ------>ANAC58--------->ATERF1(1)--------->MYB52(1)    ----------->GT1       *TSS<---------MYB46(3)   aagactctcaagagacgacggcgaaagctagcaagcaacggcaacaattcgcgagagaggtttttataattactcactgccggttgtgaacaaacgagga  22625000                                                     --------->HSFB2a(2)          <------MYB46(1)                      <---------ARR14(3)          <------MYB83                         --------->ARR14(2)         --------->MYB59                       --------->GLK1(2)         <---------TOE2(3)                     --------->ARR11(3)    <---------ARR11(3)               --------->AHL20(2)    --------->ARR11(3)               <---------AHL20(2)    <---------AHL20(2)              <---------ATHB12 <---------HSFB2a(2)    <---------AHL20(1)            --------->WOX13(1) <---------HSFC1(1)    --------->AHL20(2)          ------------>CBF     --------->HSFC1(1)    --------->AHL20(1)  <---------ANAC58       <---------ARR11(3) -ZmHOX2a(1)            <---------ANAC46       <---------ARR14(2)                        --------->ANAC46 -------->GT1           <---------ANAC58       --------->ARR14(3)                  <---------TOE2(3)   tgggaatatattaggtttacttagttacttggagaccaattaatctgaaaatcttctagaatgggcctagagcatctacatagttaagaaaacacaacaa  22625100                                                               <----------DOF2                                                             ---------->ID1                                               <------------------------ANAC81                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                          <------------------------ANAC81     --------->ANAC58             ---------->DOF2  <---------AHL20(2)<------------------------ANAC81     <-----------GT1            <---------WRKY38(1)         <------------------------ANAC81       --------->ANAC58     <----------DOF2          <-----------GT1<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  ------->TEIL<------- <-----------GT1        <----------DOF2<----------DOF2      <-----------GT1   --------->ANAC46    <--   atttgacctttcagtcaaagtagaggctttatttacattctctttttttttttttttttttttttcttttttttttgaacacgaatttacattctctttt  22625200                                                                 <----------DOF2                                                                 <---------DAG2                                                              <-----------GT1                                                             <-----------GT1       --------->AHL20(2)                      <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->TOE2(3)                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <-- ---DOF2                   ------>ZmHOX2a(1)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <-------- ---------GT1             --------->TOE2(3) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <-----------GT1   tatccataaataaacaaacaaaaaacatcctaaatttgtctagttttttttttttttttttttttaactttttcttatgtaagtcttgtttccaaacatt  22625300                                                                    --------->YAB1                                                         <----------DOF2               --------->HSFB2a(2)                                                       --------->ZAT14   ----------->GT1    <--------                                                   <---------ALFIN1<---------ATHB12<---------GLK1(2)                                              --------->ANAC46     --------->MYB46(3)  <---------HSFB2a(2)                                              --------->ANAC58--------->ANAC58   <---------YAB1                                              --------->DAG2  --------->ANAC58<---------ARR14(2)                                              --------->ANAC58--------->ANAC46--------->ARR14(2)                       --------->AHL20(2)    ---------->DOF2---------->DOF2   --------->GLK1(2) <----                       --------->YAB1    <-------TEIL--------->ANAC46    --------->At4g35610--------- ---------GT1         <---------ATHB12--------->REM1(1)<---------ZAT14   <---------ANAC46<---------MYB52(1) -ATHB12      <---------GLK1(2)  --------->ZAT6   --------->ZAT18 -------->P  ------->TEIL<--------P<   tttcagtatgtagagagaatttcaataatatactaatactacatccataaggcacactgcattaaagcaaccatgaggtgaatctgattctggtagctaa  22625400                                    <-------GAMYB       --------->TOE2(3)          --------->ALFIN1 --------->YAB1                 <---------bZIP60(2)                                               <-- -At4g35610                     <---------ANAC46                                               <----- -----TOE2(3)            <---------YAB1     --------->YAB1                                     ------ >At4g35610       ------>ZmHOX2a(1)<---------MYB46(3)        --------->YAB1                   <------ -------TEIL     --------->TOE2(3)<---------AtMYB61  ---------->DOF2               <---------TOE2(3)   gattcataacatcaaaactcctcaattacgaatgatgtggttgcaaatataaactcaaagtaataacaatgagccagagattacaaaggtttgtggaatg  22625500  Previous    Next  AGI:  At3g61111.1    Description:  structural constituent of ribosome. similar to ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G61110.1); similar to ribosomal protein S27 [Brassica rapa] (GB:ABL97986.1); similar to unknown [Populus trichocarpa] (GB:ABK92659.1); contains InterPro domain Ribosomal protein S27e; (InterPro:IPR000592); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 22624205    to: 22624977    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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