Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  <---------ARR14(2)                                  --------->ARR14(2)                       <---------ANAC58                       <---------ANAC46                       <---------ANAC58                    --------->At4g35610                     --------->ARR11(3)            <----------DOF2    ----------->GT1 --------->RVE1(1)             <----------DOF2       <---------ZAT2    <---------- --------YAB1       --------->CCA1(1) --------->LBD16      <---------At4g35610           ----------->GT1 -----YAB1     --------->YAB1  --------->ALFIN1  ----------------->AGL1 <---------At4g35610 >DOF2  --------->AHL20(2) ---------->DOF2  --------->ATHB12     ---------->DOF2   --------------->AGL15   tataaatagaaaaaatatcaaaatatcgtgaaagtggatccgagatttattgcctttagggagatggcaaagctagctgttcttacttaaaatgtcaaat  22617700                                                       --------->At4g35610                                                       <---------CCA1(2)                                                    <<<<<<<<<<WRKY43                                                    <<<<<<<<<<WRKY38                                                    <<<<<<<<<<WRKY26                                           <---------ANAC46                                           <---------ANAC58                     <---------------------WRI1   <------MYB83                  --------->At4g35610      <---------ANAC58                     <---------YAB1  <----                  <---------At4g35610    *TSS--------->ALFIN1 <----------DOF2   ----------->TBP -----              <-----------HVH21       ---------->DOF2  <---------At4g35610  <----------DOF2     -----     ------>ZmHOX2a(1)             --------->YAB1 <------MYB46(1)       <----------DOF2         ----- -HVH21    <---------ANAC46       <---------YAB1 --------->MYB59     <-----------GT1     --------->AtMYB61   aatcttcctcgttttgtgtcatcggagatagaaactatgataaaggcgtgtttggtcatctctcctttttatttctttctttataaatagaccaaaacac  22617800                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC46                                                                 --------->AtMYB61                                                                 <---------ALFIN1                                                           --------->REM1(2)                   <-----                                                           <---------ZAT14                    <------                                                           --------->ZAT14              --------->ALFIN1                                                         --------->LBD16               <-------MYC3                                                         --------------->AtSPL8        ------->MYC3                                                        <---------ANAC58               ------->MYC2                                                        <---------ANAC55(2)            <-------MYC2                                                        <---------ANAC46              --------->TGA1a              <------ZmHOX2a(2)                         <---------ANAC55(1)           <---------ANAC58              =================HOX2a_HOX2a             <-----------------------TaNAC69(2) --------->ALFIN1             <---------ARR11(3)               <---------ETT(2)  --------->ANAC46      <---------TGA1a <---------MYB52(1)                          <---------------------WRI1               <---------ANAC58 -----O2     --------->ARR11(3)           --------->DEAR3(2) <---------ZAT14          <---------ANAC46 ---->O2<---------WRKY12                  <------------AtMYB77--------->ANAC46     <---------LBD16 ---->bZIP60(2)         ------>ZmHOX2a(1) --------->MYB46(3) --------->ZAT18      --------->ANAC46 ---->ANAC46------->GAMYB  <---------ATHB12------->GAMYB<---------ANAC58 <------NtERF2===============   gtcgttttgttcaacgatctaatctcctaatcgtttcatttctaaccgtcgataagttccgtgtacaccacaggcctcatctatacgcgcgtgtggcaca  22617900                                     <---------ANAC58                                     <---------ANAC58                                     <---------ANAC46                               <------NtERF2                                               --------->DAG2                           --------->ANAC58                         --------->TOE2(3)     ---------->DOF2      <------ZmHOX2a(1)    --------->ANAC46            --------->ANAC58            <---------AHL20(2) ----ALFIN1            ---------->DOF2                 --------->ANAC58            --------->AHL20(2) ---ZAT18 <------ZmHOX2a(1)--------->ANAC58          <-----------RAV1(2)     <-----------GT1 =================================bZIP_DOF<---------ZAT6   <------NtERF2  <---------AHL20(2)   cttatcgaggaaggagaacacatcttaaaacgcagcgtttcgtagtgttaatgggccaggcctcaagaagccttatttttttcatttttttaaaaagctg  22618000                                                                                       --------->O2                                                                                     ----------->RAV1(1)                                                                                     <---------ALFIN1                                                                                 --------->MYB46(3)                  --------->ANAC58                                             --------->MYB52(1)                  --------->ANAC58                                        --------->AHL20(2)             --------->ANAC58       <---------CCA1(2)                   <------------CBF      -------             --------->ANAC58   <----------DOF2 <---------WRKY38(1)----------->GT1------->GAMYB  ----    ----------->GT1        <---------ARR11(3) <-----------HVH21----------->HVH21--------->RAP2.6(3)   gttctgaagttaaacaagacaaggatgaagataactttgtatccaaacagtcaccgaaataagcttggacgggaaattgaataacggccacatgaagaat  22618100                                 <---------ANAC58                                 <---------ANAC58                                <------NtERF2                               <---------MYB46(3)                               --------->ABI4(2)                               ------>NtERF2                             <------NtERF2                             --------->ATERF1(1)                             <-------GAMYB  <---------ARR14(2)          <------NtERF2     <---------ATERF1(1)                <---------ALFIN1       <---------LBD16      <---------RAP2.3(1)              ------>NtERF2     *TSS--------->LBD16    <---------MYB46(3)          --------->ZAT2   ---------->DOF2         <---------RAP2.6(2)          <---------ZAT2       --------->ANAC46  --------->AtMYB61        <---------DEAR3(1)     <----------DOF2        <<<<<<<<<TBF1 ----------------->AGL1    <---------DREB2C(2)   <---------ANAC58 <---------ARR11(3) -->YAB1<---------LBD16    <---------ANAC46 --------->ARR14(2) ----------->RAV1(1)         ------>ZmHOX2a(1) ----->YAB1      >>>>>>>>>TBF1<---------DEAR3(1) <---------ANAC58<---------ALFIN1          --------->HSFB2a(2)   aataccaaagccgggagaagaagaaaatggcggtggcttctcttagtatttgcttctctgctcggccacatcttcttcttcgcaacttctctcctcgacc  22618200                                        <---------MYB46(3)                                  <------MYB46(1)                                  <------MYB83                     <----------DOF2<-----------RAV1(1)                   <---------YAB1<---------AtMYB61              <XXXXXXXXXXXXXXXXXXXXMIR169D-G        <---------ANAC58      <-----------RAV1(1)        <---------ANAC46  <---------ANAC58                                         <-----------GT1        <---------ANAC58  <---------ANAC58                          <---------AHL20(2)  ------->TEIL   <-----------RAV1(1)   <---------At4g35610          <---------AHL20(2)    <------NtERF2          <-   caaatttgttgctagtaagttatctttagcttatgttggtgttggatgaacaatatttcattgttttgatataatggaggcaaatttacgaattttgtat  22618300                                                                               <---------MYB46(3)                                                                          <--------P                                                                        <------MYB83                                                                        <---------MYB46(3)                                                                        <------MYB46(1)           ---                                                                      <---------WOX13(1)         <---                        --------->MYB52(2)                          --------->ATHB12            -----          ---------->DOF2  <-----------GT1                         <---------AHL20(2)   --------->ATHB12       --------------->AGL15                                   --------->AHL20(2)      --------->ICU4       <---------------AGL15<---------At5g28300<---------WOX13(1) <---------WOX13(1)   <---------ATHB12   --------->ZAT14   --------->TOE2(3)      <---------YAB1     <---------AHL20(2)  <------NtERF2<---- ----------GT1       <----------DOF2   --------->YAB1    <---------At4g35610--------->MYB52(2) <-----   ttctctgttctcaaaagagcaaactttagttactgttttgatcatactaattgaatttcatctgtttaattgattggttagtggctgcaatgagtgagga  22618400                                                               --------->ALFIN1                                                               <---------AtMYB61                                                             <---------MYB46(3)                                                             <------MYB46(1)                                                             <------MYB83                                                            <---------MYB46(3)                                                            --------->MYB55(2)    <---------ANAC58                                        <---------AtMYB61    <---------ANAC58                                     <-----------RAV1(1)    <---------ANAC46          --------->ANAC58      <------MYB83  <---------ANAC46           <------- --->ZmHOX2a(2)              --------->DAG2         <---------MYB46(3)                    <---------YAB1 ---ZmHOX2a(2)              ---------->DOF2         <------MYB46(1)<---------MYB46(3)     --------->ICU4 ---->ARR14(2)      --------->HSFB2a(2)<---------At4g35610 <---------MYB52(1)        --------->ANAC46 -----ARR14(2)      <---------HSFB2a(2)--------->At4g35610<-------GAMYB<-------TEIL  --------->ANAC58 -ZmHOX2a(1) <---------GLK1(2)--------->ANAC58  --------->ATHB12<---------MYB46(3)   --------->ANAC58   tccaattcgtgaatggattcttacagaaggaaaagcaactcagataacaaagattggttctgttggtggtggatgcattaatcttgcaagtcattatcaa  22618500                                         <---------WOX13(1)                                       <---------AHL20(2)                                       --------->ATHB12                                      --------->AHL20(2)                                      <---------AHL20(2)                                            -                               ----------->GT1                                                      <                         <---------MYB52(2)                                                  <-------                  --------->TOE2(3)  <---------AHL20(2)                           <----------DOF2 <-- --YAB1    <----------DOF2 --------->MYB52(1)                         --------->YAB1   <---------TOE2(3)   actgatgctggttctttcttcgttaaaactaacaggtatattaattgatgtcttactaaacctctctggtattcatagtcaagacttttaatgttttgtt  22618600  Previous    Next  AGI:  At3g61070.1    Description:  PEX11E. similar to PEX11D [Arabidopsis thaliana] (TAIR:AT2G45740.1); similar to PEX11D [Arabidopsis thaliana] (TAIR:AT2G45740.2); similar to PEX11D [Arabidopsis thaliana] (TAIR:AT2G45740.3); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96573.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733) Range:  from: 22615577    to: 22617741    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61080.1    Description:  fructosamine kinase family protein. Identical to Uncharacterized protein At3g61080 [Arabidopsis Thaliana] (GB:Q9LEW8); similar to unnamed protein product [Vitis vinifera] (GB:CAO24394.1); contains InterPro domain Fructosamine kinase; (InterPro:IPR005581); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Ketosamine-3-kinase (InterPro:IPR016477) Range:  from: 22618105    to: 22620074    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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