Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->TOE1(3)                             --------->ARR14(2)      --------->LBD16   <------NtERF2                                                   --------->WOX13(1)     <---------TGA1a   ------>NtERF2    ------>MYB46(1)                                --------->AHL20(2)     <---------ANAC46 --------->ETT(2)  ------>MYB83                                   <---------AHL20(2)     <---------O2     <---------ETT(2)--------->TOE2(3)      --------->AHL20(2)    --------->AHL20(2)     ==================bZIP_DOF --------->TOE2(3)            <---------AHL20(2)    <---------AHL20(2)     --------->O2  <-----------RAV1(1)<---------MYB59    <---------AHL20(2)  --------->YAB1--------->YAB1     --------->TGA1a ---------->ID1 <-----------------AGL1 <---------------AGL15  --------->AHL20(2) --DOF2     ---------->DOF2  <---------ARR14(2)          --------->AHL20(2)  --------->TOE2(3)   gatgctcccgtgagaaaagttttgtcgccagtatccataacctaattggaacattgtatttatatatatagatagataaccatatttaattaatcacatt  22604200                                                                           --------->DEAR3(2)                                                                           --------->HSFB2a(1)                                                                   <---------HSFB2a(1)                                                                   --------->HSFC1(2)                                             <---------ANAC46      --------->HSFB2a(1)                               <---------TOE1(2)      <---------ANAC46     <---------HSFC1(2)    ----                          <-----------HVH21 <---------LBD16        <---------HSFC1(2)           -----                         --------->O2   --------->ANAC58        <------NtERF2          <---------TOE2(3)        <-----------GT1  <---------O2   --------->ANAC58     <------NtERF2 --------->HSFC1(2)  <-----   <---------YAB1     ----------->HVH21 --------->AtLEC2   <---------RAP2.6(2)       ---------->DOF2   aacttataatttacctccaacgagacgacgtcgaaggtagccatgctacggagacttcgtggtggccgaaggctcgaaccgtcttgctaaaggtttgccc  22604300                                                                                          --------->ATHB12                         ------->TEIL                                                    <---------YAB1                        --------->ARR14(2)                                  --------->ANAC58         <-----------HVH21              <---------At4g35610    <---------MYB46(3)        ----------->HVH21 ----->LBD16            <---------GLK1(2)                      ----------->GT1         <---------ICU4 ---->LBD16         ---------->DOF2    ------->TEIL     ----------------->AGL1         --------->YAB1 ----LBD16--------->WRKY18(1)      <-----------------AGL2   <----------DOF2 --------->ANAC58   ggataagacatggtcaagcgtttaaagaacctctcttgctgcatctggtgaagaaatgaccactttggttaaacttccaagcctaagactcatgactggt  22604400                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                             <------MYB83                                                                                             <-------                                                                                             --------                                                                                             <------MYB46(1)                                                                                            <--------                                                                                          <---------MYB52(1)                                                                                         --------->LBD16                                                                                        <---------LBD16                                                                                        <---------HSFB2a(2)                                                                                        --------->HSFB2a(2)                                                                                    --------->HSFB2a(1)                                                               ----------------->AGL3  <---------LBD16                                                               <-----------------AGL2  <-------TEIL--                                                  ------>ZmHOX2a(2)                 <---------HSFC1(2)                                                <---------ARR14(2)                  <---------HSFB2a(1)                                      <---------DAG2           <-----------------AGL1--------->ARR14(2)                          ------->TEIL<----------DOF2       <---------GLK1(1)       --------->HSFC1(2)                         --------->MYB52(1) <---------At4g35610----------------->AGL1<---------ARR14(2)               <------ZmHOX2a(2)  <------ZmHOX2a(1)       <---------HSFB2a(1)    --------->LBD16 <---               ==========================HOX2a_HOX2a      --------->HSFB2a(1)   --------->LBD16------              <---------ARR11(3)  =======================HOX2a_HOX2a           --------->HSFB2a(2)<--              --------->ARR11(3)--------->ALFIN1<---------ARR11(3)             <---------HSFB2a(2)---             <---------GLK1(1)--------->ALFIN1  --------->ARR11(3) <---------ATHB51----------->ARR10   ccataaactctcgagagatcagcaaatgaacggtgaggagcttttccgatgatctggagaaggtttccgattatgggccatcccgaaggtccgggaggtc  22604500 <---------ARR14(2)                                          <---------ANAC55(2) --------->ARR14(2)                                          <---------ANAC58 ------>ANAC58                                               <---------ANAC58 ------>ANAC55(2)                                            <---------ANAC55(1) ------>ANAC58                                               ----------->GT1 ------>LBD16                                                <---------ANAC46 ------>ANAC46                                               --------->ANAC55(2) -------ANAC55(2)                                           <-----------------------TaNAC69(2) --HSFB2a(1)                                                <-------TEIL ->HSFB2a(1)                                              <---------ARR14(2) -AtMYB61                      <------NtERF2              --------->ARR14(2) ------->LBD16         ------>ZmHOX2a(2)                  --------->ARR11(1) ------LBD16    --------->At4g35610                     ----------->ARR10<---------At4g35610 --->PCF5     <---------ZAT18<---------DEAR3(1)     --------->YAB1       --------->At4g35610 -------HSFB2a(2)     <---------GLK1(1)       ----------->RAV1(1) ---------->DOF2 ------>HSFB2a(2)    <---------ARR11(3)      <----------ID1--------->CCA1(2)        ---------->DOF2   ccggaaccagtgccagtgagcttgatctccgtcgtcgtgatttaacagcgacaagaataagatacgtgaaaaggaagctaagtatcaaaagcagagctag  22604600                                                                                            <--------                                                                                           <---------AHL20(1)                                                                                           --------->AHL20(2)                                                                                        --------->YAB1                                                                                      <---------YAB1                                                                                     --------->TOE2(3)                <-----------HVH21                                                   <--------HAHB4                <-----------TGA1                       --------->ANAC55(2)    ------->TEIL <---------AHL20(2)          <----------DOF2                            <-----------GT1  --------->YAB1--------->YAB1      <---------ZAT18                          ------->MYC3    <---------HSFB2a(2) <---------ATHB12     <---------ANAC58                    --------->ANAC46      --------->HSFB2a(2) <---------YAB1     <---------ANAC46       <---------ANAC46   <-------MYC3  <---------AHL20(2)  --------->WOX13(1)     <---------ANAC58  <---------ANAC46 ------>ZmHOX2a(1)  <-----------TBP   <---------CCA1(2)<------   agctattgtgtgcttcatcgtcatttcgtcgagtgtgttctcctagccacatgttttacttatttatagaaatgatactgtatctatcattaataaaatt  22604700                                              <---------ZAT18                                              <-------TEIL                                              --------->ZAT18                                         <---------AHL20(2)                                         --------->AHL20(2)    <---------MYB52(1)            --------->ZAT6  --------->YAB1          --------->MYB46(3)  --------->ZAT14                             ---------->DOF2 -AHL20(2)              ----------->RAV1(1)   <---------ZAT14                       <------ZmHOX2a(1) ------CBF  <----------DOF2 --------->At4g35610             ---------->DOF2      --------->HSFB2a(2)   gctatcgttatgggctttagtttgagcaacagcttcactctaattaagtacacttgttgacaaaaagaaaaccccatttttctctaggactcaaaagtca  22604800                                                                 ------------>CBF                <---                                                                ----------->RAV1(1)          <-------                                                               --------->MYB46(3)            --------                                                         --------->YAB1                      --------                                                         <---------ICU4                 <---------YAB1               ------>ZmHOX2a(2)<----------ID1       <---------AHL20(2)            ----------->GT1 <-       <---------AHL20(2)   ---------->DOF2          --------->AHL20(2)--------->ANAC55(2)  ---------  ------------>CBF    ---------->DOF2   ----------->GT1 --------->ICU4 <---------ANAC55(2)  <--------   aatgtacaatttatcgatcgtttgaaaagctaaagaaacaaaatgtgatatgtttttaattatcaacaacaatatgtgatatgtctagttataaataatt  22604900                          <---------AHL20(2)                          --------->AHL20(2)                         <---------AHL20(2)                   --------->TGA2(1)                   ----------->GT1                   <---------bZIP60(1)                   <---------TGA2(1)                   --------->bZIP60(1)                   <---------ANAC46                   <---------ANAC55(2)                   --------->ANAC55(2)                 <---------TGA2(2)     <---------ARR11(3)  --------->AHL20(2)           <---------RVE1(1)     --------->ARR11(3)  <---------AHL20(1)          --------->ARR11(3)    --------->YAB1----------->STF1                   <---------ARR11(3) --------GT1    ----------->TGA1              --------->AHL20(2) --AHL20(2)     ----------->HVH21            --------->AHL20(2)                    ------>MYB83 ->AHL20(1)  <---------AHL20(1)              <---------AHL20(2)                    ------>MYB46(1) ->AHL20(2)  <---------AHL20(2)         ------>ZmHOX2a(2)      --------->ATHB51  <---------MYB59 --------YAB1--------->AHL20(1)       <---------ARR11(3)       <---------ICU4----------->HVH21     -- >AHL20(2)--------->AHL20(2)          --------->ARR11(3)    --------->YAB1   <---------YAB1        -- -AHL20(2)<---------AHL20(2)      <---------At4g35610<---------GLK1(2) <---------TOE2(3)         <---   tacgaatgatattaatatatgacgtaatttaattttagatgatctatataaattagattttttcataatttcaaaggttatgaccgaaccagatagaaac  22605000                                                                                   <---------RAP2.6(2)                                                         <---------ANAC58      <---------MYB46(3)        <---------SPL7                                   <---------ANAC58<---------ANAC55(2)       <---------RAP2.6(2)                           ------->MYC3   --------->ANAC58      --------->RAP2.6(3)                            <-------MYC3   --------->ANAC58 ---->MYB46(1)                                      --------->ANAC55(1)  --------->ANAC55(2) <------- ---->MYB83             --------->GLK1(1)           <---------ANAC55(2) <-------TEIL   <----------DOF2 ------MYB59<------NtERF2                <<<<<<<<<<<<WRKY18 --------->ATHB12--------->MYB52(1)   cgaactataccggccgagaactacagaaatcgaaattgatgtcaattgtcaaacacgtttcttgataggcacgatacataatggttcggctttgtgcaag  22605100  Previous    Next  AGI:  At3g61035.1    Description:  cytochrome P450 family protein. similar to CYP76C2 (cytochrome P450, family 76, subfamily C, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G45570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24427.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 22603227    to: 22604624    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61040.1    Description:  CYP76C7 (cytochrome P450, family 76, subfamily C, polypeptide 7); oxygen binding. similar to CYP76C4 (cytochrome P450, family 76, subfamily C, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G45550.1); similar to CYP76C3 (cytochrome P450, family 76, subfamily C, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G45580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24417.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 22604948    to: 22607100    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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