Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->MYB52(1)       <---------ARR14(2)      <------ZmHOX2a(1)                                                                    --------->ARR11(3) <------NtERF2                                                                             --------->AHL20(1) -------->LBD16                                                                      ----------->GT1 ------->DEAR3(1)                                                                    --------->LBD16 ------>ATERF1(1)                                                                   <---------HSFB2a(2) -------LBD16                                                                       ----------->GT1<- ----NtERF2                                                                         --------->HSFB2a(2) -->NtERF2                                                                         <---------LBD16 -- ------RAP2.3(1)                                                                   ------>ZmHOX2a(2) ---->ETT(2)                                                                 <----------DOF2    ----- -----DEAR3(1)                                      --------->MYB52(1)    --------->ARR11(3)    ----- -----HVH21                          ------------------------>ANAC81      <---------ARR11(3)--------- ->ALFIN1                          ---------->DOF2  <-----------GT1 --------->HSFB2a(2)    <---------AHL20(1) ----RAV1(1)--------->ALFIN1  ----------->GT1      --------->ICU4   <---------HSFB2a(2)   --------->AHL20(2)   gccggagaggaacggtggagagattaaactggaagtgaaaaggaatcgaagtaataacgaaatttcaggtctcgaagagctttgatcgggaaatatatag  22586200                                                                                       --------->MYB46(3)                                                                                     --------->AtMYB61                                                                                    --------->MYB46(3)                                                                                   -------->P    ----                                                                                  ------->GAMYB  <---                                                                                 <---------MYB111(2)        <---------WOX13(1)                                                       <---------MYB52(2)       --------->ARR14(2)                                                        --------->MYB46(3)       <---------ARR14(2)                                                        <---------MYB55(2) --------->MYB46(3)           *TSS                                              <---------At4g35610 --------DOF5.7(2)        ------->GAMYB                                         --------->At4g35610 ------->MYB52(1)        --------->ANAC58                                     <---------WRKY12   ==== ---->ANAC55(2)          --------->ANAC58             ---------->DOF2  --------->TOE1(3)--------->AtMYB61 ---->ANAC46           --------->MYB52(1)           --------->YAB1     --------->TOE2(3)<---------ALFIN1 >CCA1(2)      --------->ATHB12              <------------CBF    <------------CBF<---------MYB111(1)   gtaacgacggattggcaagattgagcaacgaaattgttccaaacgagaattgaatcaaaagaaaacgaattgaccttaagtcaactaccaccaccatggc  22586300                                                                                  <---------AHL20(2)                                                                                 <---------AHL20(1)                                                                                 <---------AHL20(2)                                                                       --------------->AtSPL8                ------------>CBF                                       --------------->AtSPL3              --------->YAB1                                     <---------------AGL15             <---------ATHB12                                    --------------->AGL15         <---------MYB52(2)                       <---------YAB1----------------->AGL3 <---------AHL20(2)       <-----------GT1               --------->ZAT14   <---------AHL20(2)        --------->AHL20(2) ----------->AGL15                   <---------ZAT14   --------->AHL20(2)    --------->ICU4 ------------AGL15   <---------ARR11(3)          <-----------GT1----------------->AGL2<---------AHL20(2) ================================================================================MADS_MADS <---------AHL20(2)   tactagtagtaactaatcagcaatatgtttttttttcactgaagtccaaattttcatttttttaatcccaaatacagtactaattttttttatttttttt  22586400                                                --------->ANAC58                                                --------->ANAC46                                -----                                                --------->ANAC58                        ------>MYB83                    <---------ICU4         <---------ATHB12                             ------>MYB46(1)                    ---------->DOF2    --------->AHL20(2)                           ------>NtERF2 <--                 --------->YAB1        <---------AHL20(2)                          --------->RAP2.6(2)  <---------At4g35610               ----------->GT1                               --------->MYB46(3)  --------->At4g35610              ----------->GT1       --------->AtLEC2        --------->At4g35610  ----------->RAV1(2)        ---------->DOF2--------->YAB1                       <---------At4g35610   tgtcatctggtcattctattaataaaggcctaaaagagtgtttaaatcataagccagccttgcaacatcgcataggctacttcagccaccaaattagaca  22586500                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                               ------>MYB83       ---   <------MYB46(1)                                                             ------>MYB46(1)    ---   <------MYB83                                                              --------->DREB2C(2)  ---  --------->MYB46(2)             ---------->DOF2           ---------->DOF2   --------->MYB46(3)   ---  --------->MYB111(1)       <---------ANAC55(2)    ----------->GT1           --------->DEAR3(1)   ---  --------->MYB59          <-------TEIL           ----------->GT1 <---------TOE2(3)               <-- <--------P             <------ZmHOX2a(1)      --------->DAG2     *TSS      --------->DEAR3(2)    --- ----->DOF2           <---------TOE1(3)       --------->DAG2     <---------DOF5.7(2)            ----- -------TOE2(3)       <---------TOE2(3)      ---------->DOF2--------->DAG2<-----------GT1     -------   aaggtaggtctaaaacagagaattaaggatacataaaaagaggcataaaaagggggaaaaaaaaagtaaacgtttttcaccgactcatcgtattacaagc  22586600                                  <---------LBD16                               <---------At4g35610                               --------->At4g35610                             <------------------SPL14                            <---------MYB52(1)                            <------NtERF2                           <-----------HVH21                           <---------RAP2.6(3)                           <-----------TGA1                           ------>NtERF2                          --------->RRTF1(2)                          --------->RAP2.6(2)                          --------->RAP2.3(2)                          --------->RAP2.3(3)          --------->ANAC58--------->DEAR3(1)      --------->ANAC58   --------->ATERF1(1)      --------->ANAC58   <------NtERF2 --------->ATERF1(1)     --------->RAP2.3(1) <------NtERF2           --------->RRTF1(1) ----->NtERF2            --------->ERF1 -----------HVH21       <---------ATERF1(1) ---------ATERF1(1)     ------>NtERF2 ------->DEAR3(1)       --------->ABI4(1) --------DEAR3(1)      <---------DEAR3(1) --------O2            --------->DEAR3(1) ------->O2            --------->ANAC46 ------->RAP2.3(3)     --------->RAP2.3(3) ------->RAP2.3(2)     --------->RRTF1(3) ------>ATERF1(1)      --------->RAP2.3(2) ------>ORA47(2)      --------->ERF1 ------>RAP2.3(1)     --------->ATERF1(1) ------>RRTF1(1)      --------->DEAR4(2)                                          <---------ANAC46 ------>DEAR4(2)      --------->RAP2.3(1)                        <---------ARR14(2) ----NtERF2          <---------ATERF1(1) --------->ANAC58        --------->ARR11(3) ------>ERF1        --------->ANAC46     --------->ANAC58    --------->LBD16  <---------------------WRI1 -->GAMYB --------->ANAC58--------->RRTF1(3)         <----------DOF2<---------LBD16                -- -->ANAC46<---------ALFIN1--------->DREB2C(2)    <---------CCA1(2) ------>ZmHOX2a(2)     ---------->DOF2   gccgtcgcacacacacacttactcgccgccgtcatctacgggcacgatttcatctctttctcccgtcgatctcggaagtatgcgatgtgttcaaagggaa  22586700                           <---------SPL7         --------->SPL7                         <---------MYB52(1)       <-------TEIL <---------At4g35610                        <-------GAMYB         --------------->AtSPL8                       --------->MYB52(2)     --------------->AtSPL3                               <-                       <---------MYB46(3)   --------->ZAT18    <---------ZAT2--------->ANAC58      --                      --------->SPL7<---------ARR14(2)         --------->ZAT2--------->ANAC58   -----              <---------WRKY45      --------->ARR14(2)         --------->At4g35610 <-----------HVH21              <---------WRKY12      --------->GLK1(2)       --------->LBD16  --------->ANAC46   <----            <-----------HVH21       <-----------ARR10     <---------LBD16 ------>NtERF2       ------- <-----------HVH21  <-----------HVH21       <---------ZAT18--------->ANAC46<---------ALFIN1 <-------- ------->MYB59<---------WRKY38(1)  <---------GLK1(2)  <-------TEIL        <---------SPL7    ---------   ttgggtcatagacttgtcaacgcgtccgttgtaccgagaatctgagtgcccgtacattcatccgcagctcccttgccgcacgcatggtcatccagatagt  22586800         <---------HSFB2a(2)        <---------LBD16  <---------YAB1 --------YAB1                    <---------ZAT18 ------->ICU4                  --------->At4g35610                                                  < ---->ICU4            --------->TOE2(3)                                                 <------MYB46(1) -----YAB1            --------->TOE2(2)      <---------MYB52(1)                         <------MYB83- ---->GT1------>ZmHOX2a(1)     <---------At4g35610     <----------DOF2                 --------->MYB59 -ARR14(2)           ----------->RAV1(2)    --------->TOE2(3)                        <---------MYB52(1) >ARR14(2)          -------->P------>ZmHOX2a(1)--------->MYB52(2)           <---------YAB1      <----   gattatcagtcctggagatggcaacctgagtcctgctcacttacttcgttagtctctctttctctctcagtctcgattttgaatgccattaggttgtttc  22586900               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             --------->ARR14(2)       ------>ZmHOX2a(2)                                                      =======================     --------->ARR11(3)                                           <-------GAMYB     <---------ARR11(3)      <-------GAMYB                       <---------MYB46(3)  <---------WOX13(1)        <---------MYB46(3)                   --------->MYB55(2)     <----------DOF2 ---------MYB46(3)       <-----------RAV1(1)                     --------->MYB52(2)  ------->TEIL -------->ATHB12  <---------MYB52(1) ---------->DOF2             --------->MYB111(2)<---------CCA1(2) -----ANAC46 <---------ARR14(2)<---------MYB46(3)            <---------YAB1   <------ZmHOX2a(1)   ---   ggtgattgatcttcagatcggtttgctctgtcgttgttggaaagcttaagagggaagaagatgatgtttgttggaacagaggaaatgtatctttctctga  22587000                               <---------YAB1                             --------->AHL20(2)                             --------->YAB1                      --------->LBD16                         --------->DEAR3(1)        ------>ZmHOX2a(2)                     --------->HSFB2a(2)                    <---------At5g28300        <------ZmHOX2a(2) ====HOX2a_HOX2a     <---------HSFB2a(2)                  --------->MYB46(3)          --------->ARR14(2) --->ZmHOX2a(2) --------->GLK1(1)                     <------ZmHOX2a(2)               <---------ARR14(2)   tctgtcttcttcattcacaaatcccagaaaattataaatccatggattacctttggatcactcaccgtcttctctctcaaggtaattggatcccatctgt  22587100  Previous    Next  AGI:  At3g61010.1    Description:  glycosyl hydrolase family protein 85. similar to glycosyl hydrolase family 85 protein [Arabidopsis thaliana] (TAIR:AT3G11040.1); similar to iron-binding protein [Pyrus pyrifolia] (GB:ABD66597.1); contains InterPro domain Ferritin-like (InterPro:IPR009040); contains InterPro domain Ferritin, N-terminal; (InterPro:IPR001519); contains InterPro domain Ferritin-related (InterPro:IPR012347); contains InterPro domain Glycoside hydrolase, family 85 (InterPro:IPR005201); contains InterPro domain Ferritin and Dps; (InterPro:IPR008331); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 22582467    to: 22586230    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61020.1    Description:  pseudogene, similar to P0034A04.28, several hypothetical proteins - Arabidopsis thaliana; blastp match of 43% identity and 2.2e-46 P-value to GP|29837187|dbj|BAC75569.1||AP004333 P0034A04.28 {Oryza sativa (japonica cultivar-group)} Range:  from: 22586566    to: 22588472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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