Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ------>ZmHOX2a(1)                                             <----                                 --------->TOE2(3)                                             <-----                              --------->ARR14(2)                                        -------------                              <---------ARR14(2)                               --------->AHL20(2)----       --------->TOE2(3)      --------->ARR11(3)                               --------->YAB1<-------     <XXXXXXXXXXXXXXXXXXXXMIR395A/D/E                               --------->ZAT14   <-----------GT1 ---->TOE2(3)                 <---------ARR11(3)           <---------CCA1(2)--------->WOX13(1)<------ ---->TOE1(3)         --------->LBD16                      <---------At4g35610<<<<<<<<<ARR2 --------- ---ARR11(3)        <---------LBD16                     <-------TEIL<---------ZAT14  <-----------GT1   ttcaagtttccataaacacttctgcgcataaaaatcctcagcaatacacaaatcgcgattcatctctctgagcacagacaatcaaattttccaattttat  22585800                              ------->GAMYB                              --------->TOE2(3)      --------->YAB1          --------->YAB1                                                 <-------     <---------ATHB12 <---------ARR11(3)                                                    <--------  ------>ZmHOX2a(1)   --------->ARR11(3)                                               --------->ANAC58 -----YAB1           --------->CCA1(1)                                                 --------->ANAC58 ------GT1           --------->RVE1(1)                                                 --------->ANAC46 -->AGL15            --------->GLK1(1)                                               <---------DOF5.7(2) ----->YAB1          <---------GLK1(1)                                             --------->DOF5.7(2) --AHL20(2)         --------->ARR11(3)       <---------MYB46(3)                   --------->TOE1(3) -----GT1           <---------ARR11(3)    --------->TOE1(2)                       --------->TOE2(3) >AHL20(2)    <-------TEIL   --------->MYB46(3)    ----------->GT1                <----------DOF2   catcctaatcagcaaattcatagatatctcaaccaaaatcgaaacgttggatgttgaaaaattcaaaagttttgagcatacttactttaacgccatcatc  22585900                                                                                               <-----                                                                                              ------>NtERF2                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                           --------->LBD16                                                                                       <---------ARR14(2)                                                                                       --------->GLK1(2)                                                                                       --------->ARR14(2)                            <------ZmHOX2a(1)                                         --------->GLK1(1)                  --------->At4g35610                                                 <---------GLK1(1)                  --------->ZAT2                                                  --------->ANAC58                  <---------ZAT2--------->ALFIN1                                  --------->ANAC58                  <---------At4g35610                                          <---------GLK1(2)    --------->At4g35610  <------ZmHOX2a(1)    <------ZmHOX2a(1)                <---------ARR14(2) --ICU4          ----------->RAV1(1) ----------------->AGL1                    --------->ARR14(2) -ATHB12        <-----------RAV1(2)--------->ZAT18  ----------->GT1     --------->ANAC46 <---------LBD16   cctatgagcagtattggtccagcagaaggaggaagagtggccagagaaggagagaagtaaacaaaaatgtccatccgaaacgattcgcaaatccggcgtc  22586000                                                                                                    -                                                                                                   --                                                        ------>NtERF2                             ---                                                       --------->ZAT18                           <---                                                      <---------ANAC58                 <---------At4g35610                                                      <---------ANAC46            --------->ANAC58<--                                                      <---------ANAC58            --------->ANAC58<--                                                     <------NtERF2              <--------P      <----    <---------ALFIN1                             <---------ANAC58              <---------MYB52(1)----  <-----------GT1                                <---------ANAC58            --------->MYB59    ----- -NtERF2                                    --------->YAB1                 --------->GLK1(2)  <------ --ANAC46                    ------>ZmHOX2a(1)<---------CCA1(2)    <---------MYB52(1)  --------->At4g35610 --DEAR3(1)               ---------->ID1 <----------DOF2<------NtERF2     --------->ARR14(2) <------- ->DEAR3(1)      <-----------GT1      ------>ZmHOX2a(1)<---------ZAT18    <---------ARR14(2) --------   gttttcacacccttatatatatccacttgtcctcttcatcctcctttcatatcgtggcggactaaatcccttgggcgattcggtaagtcatcggagtgtc  22586100       --------->MYB52(1)       <---------ARR14(2)      <------ZmHOX2a(1)                                                                    <---------AHL20(1) <------NtERF2                                                                             --------->ARR11(3) -------->LBD16                                                                      ----------->GT1 ------->DEAR3(1)                                                                    --------->LBD16 ------>ATERF1(1)                                                                   ----------->GT1-- ------RAP2.3(1)                                                                    --------->HSFB2a(2) ----NtERF2                                                                         <---------HSFB2a(2) -------LBD16                                                                      <---------LBD16 <- -----DEAR3(1)                                                                     ------>ZmHOX2a(2) -->NtERF2                                                                   <----------DOF2    ----- ---->ETT(2)                                        <-----------GT1       --------->ARR11(3)    ----- -----HVH21                          ------------------------>ANAC81<---------HSFB2a(2)    --------->AHL20(1) ----RAV1(1)                       ---------->DOF2  --------->MYB52(1)    <---------ARR11(3)--------- ->ALFIN1   --------->ALFIN1  ----------->GT1      --------->ICU4   --------->HSFB2a(2)   --------->AHL20(2)   gccggagaggaacggtggagagattaaactggaagtgaaaaggaatcgaagtaataacgaaatttcaggtctcgaagagctttgatcgggaaatatatag  22586200                                                                                       --------->MYB46(3)                                                                                     --------->AtMYB61                                                                                    --------->MYB46(3)                                                                                   -------->P    <---                                                                                  ------->GAMYB  ====                                                                                 <---------MYB52(2)        <---------WOX13(1)                                                       <---------MYB111(2)       <---------ARR14(2)                                                        <---------MYB55(2)       --------->ARR14(2)                                                        <---------MYB111(1) --------->MYB46(3)           *TSS                                              --------->At4g35610 ------->MYB52(1)         ------->GAMYB                                         <---------At4g35610 --------DOF5.7(2)       --------->ANAC58                                     <---------WRKY12   ---- ---->ANAC55(2)          --------->ANAC58             ---------->DOF2  --------->TOE2(3)<---------ALFIN1 ---->ANAC46           --------->MYB52(1)           --------->YAB1     --------->TOE1(3)--------->AtMYB61 >CCA1(2)      --------->ATHB12              <------------CBF    <------------CBF--------->MYB46(3)   gtaacgacggattggcaagattgagcaacgaaattgttccaaacgagaattgaatcaaaagaaaacgaattgaccttaagtcaactaccaccaccatggc  22586300                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(1)                                                                       --------------->AtSPL3                ------------>CBF                                       --------------->AtSPL8              --------->YAB1                                     --------------->AGL15             <---------ATHB12                                    <---------------AGL15         <---------MYB52(2)                       <---------YAB1----------------->AGL3 <---------AHL20(2)       <-----------GT1               --------->ZAT14   <---------AHL20(2)        <---------AHL20(2) ------------AGL15                   <---------ZAT14   --------->AHL20(2)    --------->ICU4 ================================================================================MADS_MADS <---------AHL20(2) ----------->AGL15   <---------ARR11(3)          <-----------GT1----------------->AGL2<---------AHL20(2)   tactagtagtaactaatcagcaatatgtttttttttcactgaagtccaaattttcatttttttaatcccaaatacagtactaattttttttatttttttt  22586400                                                --------->ANAC58                                                --------->ANAC58                                -----                                                --------->ANAC46                        ------>MYB46(1)                    <---------ICU4         <---------ATHB12                             ------>MYB83                    ---------->DOF2    <---------AHL20(2)                           ------>NtERF2 <--                 --------->YAB1        --------->AHL20(2)                          --------->RAP2.6(2)  --------->At4g35610               ----------->GT1                               --------->MYB46(3)  ----------->RAV1(2)              ----------->GT1       --------->AtLEC2        <---------At4g35610  <---------At4g35610        ---------->DOF2--------->YAB1                       --------->At4g35610   tgtcatctggtcattctattaataaaggcctaaaagagtgtttaaatcataagccagccttgcaacatcgcataggctacttcagccaccaaattagaca  22586500                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                               ------>MYB83       ---   <------MYB83                                                                ------>MYB46(1)    ---   <------MYB46(1)                                                           --------->DREB2C(2)  ---  --------->MYB46(2)             ---------->DOF2           ---------->DOF2   --------->DEAR3(1)   ---  --------->MYB59           <---------ANAC55(2)    ----------->GT1           --------->MYB46(3)   ---  --------->MYB111(1)      <-------TEIL           ----------->GT1 <---------TOE2(3)               <-- <--------P             <------ZmHOX2a(1)      --------->DAG2     *TSS      --------->DEAR3(2)    --- ----->DOF2           <---------TOE1(3)       --------->DAG2     <---------DOF5.7(2)            ----- -------TOE2(3)       <---------TOE2(3)      ---------->DOF2--------->DAG2<-----------GT1     -------   aaggtaggtctaaaacagagaattaaggatacataaaaagaggcataaaaagggggaaaaaaaaagtaaacgtttttcaccgactcatcgtattacaagc  22586600                                  <---------LBD16                               --------->At4g35610                               <---------At4g35610                             <------------------SPL14                            <------NtERF2                            <---------MYB52(1)                           <-----------HVH21                           <---------RAP2.6(3)                           <-----------TGA1                           ------>NtERF2                          --------->DREB2C(2)                          --------->RRTF1(2)                          --------->RAP2.6(2)                          --------->RAP2.3(3)          <---------ALFIN1--------->RRTF1(3)      --------->ANAC58   --------->ATERF1(1)      --------->ANAC58   <------NtERF2 --------->ATERF1(1)     --------->RAP2.3(1) <------NtERF2           --------->ERF1 ---------ATERF1(1)      --------->RRTF1(1) -----------HVH21       <---------ATERF1(1) ----->NtERF2           --------->ABI4(1) --------DEAR3(1)       ------>NtERF2 ------->RAP2.3(3)     --------->ANAC46 ------->DEAR3(1)      <---------DEAR3(1) ------->RAP2.3(2)     --------->RRTF1(3) ------->O2            --------->DEAR3(1) --------O2            --------->RAP2.3(3) ------>ERF1           --------->RAP2.3(2) ------>ORA47(2)      --------->ATERF1(1) ------>RAP2.3(1)     --------->ERF1 ------>RRTF1(1)      --------->DEAR4(2)                                          <---------ANAC46 ------>ATERF1(1)     --------->RAP2.3(1)                        <---------ARR14(2) ----NtERF2          <---------ATERF1(1) --------->ANAC58        --------->ARR11(3) ------>DEAR4(2)    --------->ANAC46     --------->ANAC58    --------->LBD16  <---------------------WRI1 -->GAMYB --------->ANAC58--------->RAP2.3(2)        <----------DOF2<---------LBD16                -- -->ANAC46--------->ANAC58--------->DEAR3(1)     <---------CCA1(2) ------>ZmHOX2a(2)     ---------->DOF2   gccgtcgcacacacacacttactcgccgccgtcatctacgggcacgatttcatctctttctcccgtcgatctcggaagtatgcgatgtgttcaaagggaa  22586700  Previous    Next  AGI:  At3g61010.1    Description:  glycosyl hydrolase family protein 85. similar to glycosyl hydrolase family 85 protein [Arabidopsis thaliana] (TAIR:AT3G11040.1); similar to iron-binding protein [Pyrus pyrifolia] (GB:ABD66597.1); contains InterPro domain Ferritin-like (InterPro:IPR009040); contains InterPro domain Ferritin, N-terminal; (InterPro:IPR001519); contains InterPro domain Ferritin-related (InterPro:IPR012347); contains InterPro domain Glycoside hydrolase, family 85 (InterPro:IPR005201); contains InterPro domain Ferritin and Dps; (InterPro:IPR008331); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 22582467    to: 22586230    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61020.1    Description:  pseudogene, similar to P0034A04.28, several hypothetical proteins - Arabidopsis thaliana; blastp match of 43% identity and 2.2e-46 P-value to GP|29837187|dbj|BAC75569.1||AP004333 P0034A04.28 {Oryza sativa (japonica cultivar-group)} Range:  from: 22586566    to: 22588472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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