Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ----------->GT1    ------->TEIL  <-------TEIL --->TOE2(3)                --------->ARR11(3) --->TOE1(3)       --------->LBD16             --------->YAB1                      --------->YAB1 ---->RAV1(2)    <---------LBD16        <---------YAB1    --------->AHL20(2)---------->DOF2   gaaatgcatcggaaaaaactcagggaaacagaacttgacattatacttataaaaactcaaaaaaataacttaagaactcaaagaatcacaatcgcaaatg  22534300                           --------->CCA1(2)                         --------->YAB1                        <---------YAB1                                                           ----                      <---------ICU4                                    --------->YAB1   --------->MYB46(3)                      --------->YAB1                             --------->ANAC46      --------->YAB1                     --------->ICU4                           <------ZmHOX2a(2)     --------->YAB1              --------->ANAC58          --------->ARR14(2)   <-----------HVH21   --------->YAB1------              --------->ANAC58 --------->ANAC46      ---------->DOF2   <---------ATHB12<-----------GT1   caaaacccatcaaattaagcaaaattatgatatacgaagcagtttccgattcacagaaagagcgatcacaccaataatccaaaacataataacaatcgaa  22534400                                                                         <---------------AGL15                          <------ZmHOX2a(2)                             <-----------------AGL2                          ===========================HOX2a_HOX2a      --------->ARR14(2)                         --------->ARR14(2)                           <---------ARR14(2)                       --------->ANAC46                      --------->GLK1(2)                     <-----------GT1                         --------->ARR14(2)             ----------->GT1                    --------->GLK1(1)   <---------MYB52(1)    ---------->DOF2  --------->ANAC46           <---------GLK1(1)  <---------DEAR3(2)  <---------YAB1---------->TaMYB80            <------ZmHOX2a(1)   <---------TOE1(2) ------->GT1------>ZmHOX2a(2)              --------->YAB1   <---------GLK1(2) ---->DOF2 <------ZmHOX2a(2)        ----------->GT1   --------->REM1(1) <-----------------AGL3   agttattaaagcgatcggtatatacacgatccatcggatggataatcaggaaatctacatcagaatcgtcggtatctgtaaatggagagagagagagaga  22534500                                                                             --------->YAB1                                 <----------DOF2                      <---------LBD16      <---------ANAC58 --------->At4g35610                         --------->GLK1(2)      <---------ANAC58 <---------At4g35610                         <---------ARR11(3)             <-- <---------At4g35610  --------->ARR11(3)              ------->TEIL --------->ARR11(3)             --- --------->At4g35610  <---------ARR11(3)            <-------TEIL  <---------GLK1(2)  <---------TOE2(3)   ttgagcttacttgagcgagatagagagcttccaagctttcttctcagactgaaatgcatcggaaaacaaaatctcggaatcagatttaagaaatcgacac  22534600                                                                           *TSS                                                                          <----------DOF2         <--                                                                        <---------MYB46(3)        ---                  --------->ARR11(3)                         --------->AHL20(2)  <---------At4g35610                  --------->GLK1(2)                          <---------AHL20(2)  --------->At4g35610<                  <---------ARR11(3)          --------->TOE2(3)        <---------AtMYB61          <--                 --------->RVE1(1)            --------->TOE1(3)     --------->ALFIN1             ---- -------ZAT14 --------->YAB1     <----------ID1    <---------WOX13(1)<---------MYB46(3)          <--- ------>ZAT14--------->AHL20(2)--------->MYB52(1)<---------WRKY18(1)<---------AtMYB61            ----   tataccgattaacaaataaaaatctttaaaaaaaaacgaagaataaaaccttgactgatgcataaaaatggtggtggtttatgtgctgaagacgatggtg  22534700                                                        <---------At5g28300                                                        <-----------GT1                                                       <-----------GT1                                                     --------->GLK1(1)                                                    <-----------ARR10                <---------ARR11(1)                                                    --------->ARR14(2)              ------>MYB46(1)                                                    <---------ARR14(2)              ------>MYB83                                                 <---------TOE2(3)            --------->MYB46(3)                             <---------ANAC58    --------->ANAC55(2)         --------->TCP15(2)                             <---------ANAC58    <---------ANAC46           --------->PCF2                  --------->ALFIN1               <---------ANAC55(2)        <---------TCP15(1)                 <---------------AtSPL3         <---------LBD16             --------->ZAT18 --------DOF2    <---------------AtSPL8        <-----------GT1   <---------ANAC58 <---------MYB111(1) ------------>AGL15    <---------ALFIN1     <---------ICU4       <---------ANAC58 --------->AtMYB61 -----------TBP  --------------->AtSPL8    --------->ICU4   <----------DOF2 <---------ZAT18 -------------AGL15<---------ZAT14        <---------ANAC58  <---------DAG2  <---------PCF5 ------------->AGL2--------->ZAT14        <---------ANAC58 <---------DAG2   <---------TCP16(1) --------------AGL3<---------ZAT18       <-------TEIL<----------TaMYB80    <-----------TCP11(1) ------------->AGL3--------->ZAT18  ----------------------->TaNAC69(2) ---------->DOF2   ctttatatagaaggaagagagtgtaccaccttcgtgctcgaggtgcttattacggatttacccttttccgtttcaaagggcccaccaaatctatatttct  22534800                                                    --------->ANAC55(2)                                                    --------->ANAC46                                         --------->ATHB12           --------->AHL20(1)                    <XXXXXXXXXXXXXXXXXXXXMIR1888   <---------LBD16 --------->AHL20(2)              <---------AHL20(2)        <---------YAB1          --------->YAB1             <---------YAB1 --------->YAB1         <---------At5g28300        ----------->GT1            <---------AHL20(2)         ----------------------->TaNAC69(2)  <---------ZAT6          <---------AHL20(2)<---------ICU4         --------->RAP2.6(3) <---------YAB1    --------->AHL20(2)     <---------ATHB12       <-----------GT1  --------->YAB1 --------->AHL20(2)<   cccaatttttatatttttattttttataaatcataacttatcttcattgtatttacggcattggattaataatattagtgtagataaattagccaaaaga  22534900                                                                          ------>ZmHOX2a(2)                                        --------->YAB1              --------->At4g35610         <----                                       <---------YAB1               <---------At4g35610      <-------GAMYB                         <-----------RAV1(1)              --------->HSFB2a(1)               <--------                   --------->AHL20(2) --------->ARR11(3)  <---------HSFB2a(1)         <---------AHL20(2)         <---------At5g28300 <---------ZAT18              <---------HSFC1(2)      --------->AHL20(2)        <-----------GT1 <---------TOE2(3)     <---------TOE2(2)  <---------MYB52(1)   <---------ICU4 ---------TOE2(3)  <---------AHL20(2) <---------ARR11(3)  --------->HSFC1(2)      <---------AHL20(2)   ttaatgctatttaccatctaaatatttatgttgcacttaatatcatcgtagataactagaaacttccattagctgatcgaccatataaatatttctgttg  22535000                                           --------->ANAC55(2)                                           --------->O2                                           --------->ANAC58                                       <-----------HVH21                               --------->ANAC46                               --------->ANAC55(2)                               <---------RAP2.6(2)                               <---------ANAC55(2)                              --------->RAP2.6(3)                      ---------->DOF2     --------->AHL20(2)       <---------LBD16                      --------->ZAT6     <---------AHL20(2)       <---------At5g28300                <-----------GT1    --------->ARR14(2) --------->AHL20(2)          <-----------GT1             --------->ANAC46    ----------->GT1 -----ZAT18                  <---------ICU4--------->ANAC58  --------->WOX13(1)<--------P    -------- ---RAV1(1)              --------->AHL20(2)<---------ANAC55(2)  --------->AHL20(2)  <---------ARR14(2)   cacttaattaatgacatcgatttgcacttaattacggcattggtcacgttattgtctattcgccaattaactctaaagaaggttagtatatggcgatgta  22535100                                      --------->ARR11(3)      <---------AHL20(2)                                      <---------GLK1(2)       --------->AHL20(1)                                    ----------->ARR10         <---------AHL20(1)                                 <---------ANAC46             --------->AHL20(2)                   <-                                 <---------ANAC58            --------->AHL20(2)              --------    <-------GAMYB          <---------YAB1                    <---------ATHB12             -----------   ----------->GT1      --------->AHL20(1)               ------------>CBF            <---------TGA1a   <---------MYB46(3)   <---------AHL20(2)               <---------ATHB12            --------->TGA1a ------->MYC3           <---------AHL20(1)      <---------AHL20(2)                   <---------O2  -- <-------MYC3--------->TOE2(3)   <---------ANAC58        --------->ICU4              --------->O2 <-- --->GT1    --------->ANAC46--------->ATHB12    --------->AHL20(2) <-----------GT1  xxxxxxxxxxxxxxxxx   acatgtggttaactacgtcaaactaatatatcattgcttagattttgtatttaaatgtaatcaataaatttactcttagatgatcactcgtgtgataaaa  22535200  Previous    Next  AGI:  At3g60940.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61028.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17351.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 22532421    to: 22534675    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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