Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ARR14(2)        <---------ANAC46        <---------ANAC58        <---------ANAC58      --------->LBD16      ------>NtERF2     <---------LBD16     <---------RAP2.6(2)    <---------LBD16 --------->KAN4(2) ---------HSFC1(2) -------->HSFC1(2) ---------HSFB2a(1)                             --------->At5g28300 -------->KAN4(1)                          --------->ARR14(2) ---------KAN4(1)                          <---------ARR14(2) ----------TaMYB80                        <------NtERF2               --------->ARR11(3) -------->HSFB2a(1)                      <---------ATERF1(1)     <------ZmHOX2a(1) --------KAN4(2)     --------->ARR14(2)  <------NtERF2<---------HSFC1(2) -------->TaMYB80    <---------ARR14(2)  --------->LBD16     --------->ALFIN1 ---ZmHOX2a(1)      <------ZmHOX2a(1)  <---------LBD16--------->HSFC1(2)      ---------->DOF2--------   gaatattccggcgtatcagagaggatttgagtaatgttatggccggagacggtagaagctacggtgaggagagataatgtgaaagcgaagagagtgaaag  22511800         <------NtERF2        ------>NtERF2       --------->ETT(2)       <---------ETT(2)                                        ---------->DOF2    --------->bZIP60(1)                                    <----------ID1    <---------bZIP60(2)                                  --------->At4g35610    <---------REM1(1)    <------MYB83              --------->DAG2                         >>>>>>>>>TBF1    <---------bZIP60(1)  <------MYB46(1)--------->ALFIN1 <---------At4g35610        --------->YAB1 -->DOF2>>>>>>>>>>>>>>>>>LFY  <---------ANAC46    ---------->DOF2            ----------->GT1     ----   ctcgtgatgtcgccattggaatttggaaggttgagttgaactgtggagaagagaaagtgagaagacaaagagagtgatgaagttaataagaagaagaaga  22511900                                                                 <----------DOF2                                                           --------->At4g35610                                                           <---------At4g35610                                                       --------->ALFIN1                                                      ------->MYC3                                                      <-------MYC2                                                      ------->MYC2                                                      <-------MYC4                                                      ------->MYC4                                                      <-------MYC3                                 --                                                      <-------PIF4                                ---                                                      ------->PIF5                              <----                                                      <-------PIF5                      --------->ANAC58                                     ----------->GT1  ------->PIF4                      <---------ANAC55(2)                                    <---------TOE2(3)--------->ANAC55(2)                --------->ANAC46                           ----------->GT1           <---------ANAC55(2)                --------->ANAC58     --------->TOE2(3)     <---------ZAT6           ------------>OsbHLH66             --------->YAB1 ------->GT1  ----------->GT1       <---------YAB1 <------------OsbHLH66  ---------->DOF2       <----   ggttaaatgttaaccatggttatattgaagagttaactatggttaatttgagaacacgtgctgcttccttttgctaaaaagcctgtaatcacgaaaatgg  22512000                                                     ------>MYB46(1)                                                     --------->MYB52(1)                                                   <---------MYB59                                                  --------->DEAR3(2)                                                --------->MYB52(1)                                                ------>MYB46(1)                                              <---------MYB59                                              ------->GAMYB                                             --------->MYB46(3)                                            -------->P                     <-----------GT1                                        --------->ANAC46                  <---------AHL20(2)                         <-------TEIL   --------->ANAC58             <---------YAB1        <---------At4g35610    ------>ZmHOX2a(1)------>MYB83      --------->ICU4          <---------ZAT6   <----------DOF2   <---------YAB1 --------->HSFB2a(2)         --------->YAB1--------->YAB1 ------->ZAT18       <---------TOE2(3)  --------->ANAC58  <---------MYB52(1)<-----------GT1 ------>ALFIN1       <---------TOE1(3)---------->DOF2------>MYB83 <---------YAB1<---------YAB1 -----ANAC58     <----------DOF2    <---------HSFB2a(2) ----------->GT1   --------->AHL20(2) -----ANAC58 <----------DOF2---------->ID1 --------->MYB52(1)  <---------YAB1<---------YAB1   gtgggctttgagcttctttctttatggttcgtcctcttccaaaagcaaccgaaccgaaccgttatatcattatcaatttatcatccttgttagagttaac  22512100                                                                                                 <---                                                                                                 <---            --------->MYB52(1)                                                                  <----          <---------MYB59                                                                       -----         <---------At4g35610                                                                   <<<<<<         --------->At4g35610             <---------YAB1                         --------->At4g35610  --------->WRKY18(1)             <---------TOE2(3)                    --------->ANAC46  <------ZmHOX2a(1) <-----------HVH21       <---------At4g35610         --------->YAB1  ---------->DOF2 ---------->DOF2   catggtcaagtagctaactaaaatttgagcttatttatggatgctcattagataatcatccaaaattttgtaaaaggcactcagataaaaaggatttaga  22512200       ----------->HVH21     --------->ANAC55(2)     <---------ANAC58                                                                        <-------     <---------ANAC58                                                                        --------   <-----------GT1                                                                     ----------->GT1 ------CCA1(1)                       --------->ZAT14                                   <------MYB83 ------RVE1(1)           <---------MYB52(1)                                    <---------WRKY38(1) -- -----ARR11(3)          --------->TOE2(3)         <---------ANAC55(2)         --------->WRKY18(1)  <- ---->ARR11(3) ----------->GT1       <---------ZAT18   <---------ANAC46       ------------>CBF  <---- <<<RAP2.2    *TSS   --------->ARR11(3)   --------->YAB1           --------->AHL20(2)  <------MYB46(1)   tatttttacttgacaactagtaatatcgttagtacttagtagactcataaataagtgtcgttatcagttttaaatacttggtcaatagttggtaacatct  22512300                              <---------ALFIN1                             <---------REM1(2)                            ----------->RAV1(1)                            <-----------HVH21          <---------YAB1                           --------->ANAC58           <---------AHL20(2)                           <---------ETT(1)         <---------YAB1                           --------->ANAC58       -------->ATHB1                           ----------->HVH21      --------->YAB1              --------->HSFB2a(1)                 <---------ICU4                         --------->ZAT14        ---------->DOF2    --------->ANAC46      <---------AHL20(2)                      <---------ZAT14 --ARR11(3)   <---------HSFB2a(1)      --------->YAB1 <---------AHL20(1)           <---------ANAC55(2) ->ARR11(3)   <---------HSFC1(2)  --------->ZAT14--------->AHL20(2)         --------->YAB1 ------->HSFB2a(2)    <---------WOX13(1)  ---------->DOF2                  <---------ATHB12 --------HSFB2a(2) <---------YAB1 <---------ZAT14<---------ATHB51   <----------ID1 --------->ANAC55(2) ------DOF2   --------->HSFC1(2)--------->ANAC46 --------->ICU4--------->YAB1     <-------TEIL   <---   tttagaaatggaaagaaggttctaattgcccgacacagcactgataaagaaattattattttttataaaaacgacaaatcaaaatacgtagtttactact  22512400        <---------ARR14(2)        --------->ARR14(2)        --------->GLK1(2)                                                                          --        --------->ARR11(3)                                                                    <------        <---------ARR11(3)                  --------->AHL20(2)                          <---------AHL20(2)       --------->RVE1(1)          ----------->GT1    --------->TOE1(3)              --------->ICU4 <- --------->AtLEC2        --------->ATHB12   <---------AHL20(2)     --------->ZAT14  --------->AHL20(2) <---------ANAC55(2)    <---------YAB1      --------->AHL20(1)     <---------ZAT14  <---------AHL20(2) ----------->GT1      <-----------GT1  --------->AHL20(2)     <---------ATHB12  --------->LBD16  <--- --------HVH21 ---------->DOF2--------->ATHB12       --------->TOE2(3)         <---------ANAC46<-----   gtcatgtaaaaatctgcaaaagttttatcatttgattagaaaaaaataaaataaaccttcacaaatcagtaaactattactccgtattaattaatgggcg  22512500                                                                <-----------GT1                                                              <-----------HVH21                                                            <-------PIF5                                                            ------->MYC2                                                            <-------MYC4                                                            ------->MYC4                                                            <-------MYC2                                                            <-------PIF4                                                            ------->MYC3                                                            <-------MYC3                                                            ------->PIF4                                                            ------->PIF5                                            --------->YAB1 --------->TGA1a                <----------                                --------->YAB1             <---------ANAC55(2)         <---------ANAC55(2)                                <---------ICU4             --------->ANAC55(2)         --------->ANAC55(2)       <----------DOF2         <---------ATHB12            <---------TGA1a       --------->ICU4 ------->At4g35610  =================================================bZIP_DOF    <---------YAB1 ---LBD16       ------>ZmHOX2a(1)           <-----------GT1<---------O2    <-----------HVH21 --------At4g35610  <----------DOF2  ----------->GT1       --------->O2  <---------At4g35610 ---NtERF2     <---------ANAC58--------->ICU4            <------------OsbHLH66 --------->ANAC55(2) ----DEAR3(1)  <---------ANAC58<---------ATHB51    --------->ALFIN1      --------->At4g35610      ---   gagatgaggctttaattccttactttgagcccaattatgaggctaataacaatgtgtgagcacgtgtcactcttcagcttcacatgattatgtattgggc  22512600                                                                --------->GLK1(2)                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                            <------NtERF2                                                           --------->At4g35610                                                           <------NtERF2                                                           <---------At4g35610                                                           --------->LBD16                                                           ------>NtERF2                                                          ----------->RAV1(1)                                                          --------->DEAR3(1)   ======================                                                          --------->RRTF1(2)   <----------DOF2                                                          --------->RAP2.3(2) ------>ZmHOX2a(2)                                                         --------->RRTF1(1) --------->ARR14(2)                                                         --------->RAP2.3(1)<---------ARR11(3)                                                        --------->LBD16     <---------ARR11(1)                                                        <---------ATERF1(1) <---------ARR14(2)                                                        ------>NtERF2       --------->ARR11(3)                                                        --------->At4g35610<---------ARR14(1)                                                       --------->DEAR3(1)  <---------CCA1(2)                                  --------->MYB52(1)   <---------ALFIN1  ------>ZmHOX2a(2)                        ----------->GT1                --------->ANAC46  *TSS<------ZmHOX2a(2) --------->YAB1      --------->At4g35610         --------->DAG2<---------ARR14(2)                   < --CBF               <---------At4g35610        ---------->DOF2<---------GLK1(2)              ======= -------->GT1        <---------ZAT2  ------->GAMYB    <---------LBD16   <------ZmHOX2a(2)     -------   ctgtaataagcccaaacttcgtaagctggtcaaaaacaacgacgaagagaaaaagctccgccgcagaatctgagatcggatctttagagagagagagaaa  22512700  Previous    Next  AGI:  At3g60900.1    Description:  FLA10 (fasciclin-like arabinogalactan-protein 10). Identical to Fasciclin-like arabinogalactan protein 10 precursor (FLA10) [Arabidopsis Thaliana] (GB:Q9LZX4;GB:Q94JM1); similar to FLA8 (Arabinogalactan protein 8) [Arabidopsis thaliana] (TAIR:AT2G45470.1); similar to fasciclin-like arabinogalactan protein 13 [Gossypium hirsutum] (GB:ABV27484.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 22510335    to: 22512214    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g60910.1    Description:  catalytic. similar to catalytic [Arabidopsis thaliana] (TAIR:AT3G17365.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40747.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 22512673    to: 22514347    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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