Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ------>ZmHOX2a(2)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                                                     <---------ANAC55(1)                                                     --------->ANAC55(2)     --------->YAB1        ------->TEIL              --------->ANAC55(1)                      -------     <---------ICU4     <---------YAB1               <---------ANAC55(2)                      -------    <---------ATHB12<---------DAG2                <---------ARR14(2)                          ------- <---------AHL20(2) <----------DOF2               --------->ARR14(2)                   --------->LBD16 ----->ICU4      <-----------GT1     ----------->GT1<-------TEIL       ---------->DOF2<---------LBD16   tttttaatcaagactcaataaactttatgaatttttgaattgtaaatatacaaatacgtatgatcttggaaataaaagtaactccagaccgggaacaggc  22495400         ------>NtERF2         --------->LBD16        --------->LBD16        <---------LBD16       <---------LBD16   --------->GLK1(1)--------->ZAT2   --------->HSFB2a(1)   <---------GLK1(1)--------->At4g35610                                                          <---  ------->TEIL      <---------At4g35610                                                          ---- -->ANAC46        --------->MYB46(3)                                                      --------->ALFIN1 -->ANAC58    <------ZmHOX2a(2)      ----------->GT1                                    <---------ANAC46 -->ANAC58<------NtERF2              <---------ANAC46    <---------MYB46(3)     ---------->DOF2  ----   tacgaatttcccggcgatcaacagctcagaaacgtagtgatgtgaaatgtcgcaattggtgtttgaatttccttcaattacacaaagttgctgtggaagt  22495500                                                                                 ------>ZmHOX2a(2)                                                                                --------->At4g35610                                                                                <------ZmHOX2a(2)        ------->GAMYB                                                          --------->ARR14(2)        ----------->HVH21                                                      <---------ARR14(2)      --------->At4g35610                <---------YAB1                     ------>NtERF2      <---------At4g35610       ----------->GT1                          ------>NtERF2  <-----------HVH21          --------->YAB1                             ----------->HVH21           - <---------ZAT6             <---------AHL20(2)                          <---------DEAR3(1)          - ------ZAT14               --------->AHL20(2)                           <---------O2             ---- ----->ZAT14          <-----------HVH21 <-----------GT1                 --------->O2    --------->ARR14(2) ----->ZAT18 ----------->GT1<---------YAB1                              --------->DEAR3(1)       <---   ccagtgtcaactgaagggtatttcggtcatataatagtgaattttcatttcgatggcagaaaaatcaaactgcgacgacgcgatctgaagtatcgtctca  22495600                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                               --------->ZAT2                                                               <---------ZAT2                                                              ------>MYB83                                                              ------>MYB46(1)                    ----                                                            <---------MYB59              ------------                                                            --------->MYB46(3)        --------->LBD16                                        <---------ANAC58   --------->ANAC46      <---------ZAT2  <---     <----------DOF2                    <---------ANAC58 <---------WRKY18(1)     <---------At4g35610 ------>TEIL   ------->TEIL             <---------ANAC46--------->WRKY12         --------->At4g35610 ------->P   --------->ZAT14        <---------At4g35610 --------->WRKY38(1)      <---------GLK1(1) ----->At4g35610             <----------DOF2            --------->WRKY45         --------->GLK1(1) ------At4g35610    ------------>CBF--------->At4g35610 ----------->HVH21        --------->ZAT2 <----   tctacctctttgctctgtaccctgcaatttccttttgcagcggcttgagtcagactcgttgacccaactcggatcggactcagagctccgaggcaattca  22495700                                                   <----------CDC5                                           <-----------HVH21                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                        --------->CCA1(2)                                       <---------ARR14(2)                                       --------->AGP1                                       --------->ARR11(3)           <------------CBF      --------->At4g35610                                    --------->HSFB2a(2)       --------->LBD16             <---------At4g35610                       <------MYB46(1) <---------ARR11(3)     --------->At5g28300         <---------ZAT2                       <------MYB83 >>>>>>>ZML2   --------->At4g35610                --------->ANAC46  ----------->ARR10   <---------AtMYB61<---------AGP1  --------->At4g35610          <---------LBD16 ----->ANAC46        <---------MYB52(1)--------->ARR14(2)    <---------ANAC46       --------->LBD16 >CBF               <-------GAMYB   <---------HSFC1(1) <---------ZAT2               ------>ZmHOX2a(1) ------LBD16 <---------ANAC58       --------->HSFC1(1) --------->ZAT2          <---------ANAC58 -----LBD16  <---------ANAC58       <---------HSFB2a(2)<---------At4g35610     <---------ANAC58    --   cgggaagagactgtttcgttcccgttggtctatttgttctagatctgtgagtcgctgagctcgccgtgaaaattgggaatggcttcctcggaagctgatt  22495800                                                   <---------ANAC46                                                   --------->O2                                                   <---------TGA1a                                                   ==============================================bZIP_DOF                                                   <---------bZIP60(2)                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------O2                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                   <---------ARR11(3)                         <---------TOE2(3)                                   --------->ARR14(3)   ----------->GT1      --------->MYB52(1)                                   --------->ARR14(2)   <---------ANAC46   <---------MYB52(2)                                   <---------ARR14(2)   <---------ANAC58  --------->At4g35610                                   --------->ARR11(3)   <---------ANAC58  --------->STY1(2)                         ====================================bZIP_DOF     <---------At4g35610                         <----------DOF2         <-----------HVH21        <---------STY1(2)             ----------->GT1       <---------ARR14(3)  <------NtERF2  --------->ZAT2  ---------->DOF2 ------->LBD16    --------->ZAT6 ----------->ARR10<------NtERF2 <<<<<<<<<TAC1<---------DOF5.7(2)    <   cccgattgagtcgagtcgtaacaccagctttagagaagatcgtcaagaacgcgtcgtggcgtaaacactcgaagctagctaacgaatgcaaagctgttat  22495900                             <---------ALFIN1                          <---------ALFIN1                          --------->DEAR3(1)     <---------At4g35610                          --------->AtMYB61   <---------At4g35610                 <---------WRKY12               <---------ZAT14             <---------ZAT2                         <---------WRKY38(1)               --------->ZAT14             --------->ZAT2                         <---------ZAT18<---               --------->At4g35610         <---------At4g35610                 --------->LBD16   <---               <---------At4g35610         --------->At4g35610                --------->LBD16    ----            --------->At4g35610  ------>ZmHOX2a(1)                    ------>ZmHOX2a(1)         -----   --------->At4g35610 <-----------GT1    <-----------RAV1(1)     <---------ARR14(2)    --------->MYB52(1)  ----------->GT1   <---------GLK1(1)   ------>ZmHOX2a(1) --------->LBD16    <---------LBD16 <------- ---------At4g35610 --------->GLK1(1)   <---------At4g35610       --------->ARR14(2) --------->ANAC46   cgagcggctaaattcgctgcagaaatcaccacctccttcgtcctctgctgctactgactccgagtctgaatcctctgttcccggtccacttaacgacggt  22496000                                                                               <------ZmHOX2a(2)                                                         <-----------RAV1(1)  <---------ARR11(3) ------MYB46(3)                                        ----------->RAV1(2)    --------->ARR11(3) ------DEAR3(2)              --------->GLK1(1)         <---------ANAC58     ----------->ARR10 ----->MYB55(2)       <---------GLK1(2)                <---------ANAC58--------->ANAC58 --------->TOE1(2) ---->ALFIN1          <---------ARR14(2)         <---------YAB1        --------->ANAC58--------->HSFB2a(1) --DEAR3(1)           --------->ARR14(2)<---------At4g35610           <------NtERF2   ------->TEIL   ggttcgatcgagtactcgctcgccgattcggaactcatcttcagccctctgatcaatgcctgtggcactggcctcgccaagatcatcgaacctgctattg  22496100                                                           --------->At4g35610                                                           <---------At4g35610                                                          <---------ANAC46                                                     <---------ANAC46                                                     --------->LBD16                                                    --------->MYB55(2)                                                    <---------MYB46(3)                                                   --------->SPL7                               <----                                                  <---------MYB52(1)                          <------                                              <------------------SPL14                        <------                                    --------->At5g28300--------->ALFIN1         <---------AHL20(2)                                <---------ANAC58 <-----------HVH21             <---------AHL20(2)                 <---------LBD16<---------ANAC58 <---------SPL7                --------->AHL20(2)        <---------GLK1(2)      <-------TEIL  <---------ARR14(2)            <----------DOF2    <------     --------->YAB1    ----------->GT1       --------->ARR14(2) --------->GLK1(1)       ------>ZmHOX2a(2)   actgcattcagaaacttatcgcgcatggttacattcgtggtgaatcggacccgtccggtggagcggagtcccttctcctttttaaattgatcgattccgt  22496200                                                                                       ==============                                                                                       <-------TEIL                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)         <---------YAB1                                                               ===============         --------->ICU4              <---------ANAC58     <---------At4g35610        --------->ARR14(2) -----MYB52(1)          ------->TEIL <---------ANAC58     --------->At4g35610        <---------ARR14(2) ---ANAC58         --------->At4g35610                 <---------MYB52(1)           <------ZmHOX2a(1) ---ANAC46         <---------At4g35610       ---------->DOF2                      <---------TOE2(3)<- ---ANAC58--------->ATHB12         <-----------GT1--------->GLK1(2)            <----------CDC5     <-   ttgtaaatgccatgatttgggagatgaatccattgaattacctgtgttaaagactctgttatctgccattaactccatctcgctgaggatccatggcaaa  22496300  Previous    Next  AGI:  At3g60860.1    Description:  guanine nucleotide exchange family protein. similar to EDA10 (embryo sac development arrest 10), guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT1G01960.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G35380.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G38200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24490.1); similar to hypothetical protein OsI_010474 [Oryza sativa (indica cultivar-group)] (GB:EAY89241.1); similar to guanine nucleotide-exchange protein GEP2 [Oryza sativa] (GB:AAM00191.1); contains InterPro domain Armad Range:  from: 22495779    to: 22502697    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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