Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ICU4         --------->ATHB51         <--------HAHB4                                                                   --------->ANAC58        <---------YAB1                                                   ------>ZmHOX2a(2)--------->ANAC58        --------->ICU4                    --------->DEAR3(1)         <---------YAB1       --------->DAG2      <---------------AGL15               --------->DREB2C(2)        --------->ICU4      --------->SPL7      --------------->AGL15               --------->At1g77200      --------->YAB1 --------->ARR11(3)     ----------------->AGL3               <---------ETT(1)        <------ZmHOX2a(2)      ---------->DOF2     ----------------->AGL2       --------->ANAC55(2)            <---------ARR11(3)   --------->TOE1(1)   <------ZmHOX2a(1)              <---------ANAC55(2)           ================HOX2a_HOX2a      ---- ------->ZAT14                   <---------ICU4                 ===================HOX2a_HOX2a   <--- ------->ZAT18                  --------->ICU4                  <------ZmHOX2a(1) <---------ARR11(3) --------ZAT14             ----------->GT1--------->DEAR4(1)---------->DOF2 <------ZmHOX2a(2)<------- ------>ALFIN1            --------->At4g35610 ----------->RAV1(1)--------->ARR11(3)   --------->TOE2(1)   gtgcaggaccataattagtcaaaacgacagcgtaataagtaacaccgacaacaccaagaaccaaaaggatcatgatcgatccaagacctcgtaaggcagt  22480200                                                                                          --------->HSFB2a(2)                                                                                          <---------HSFB2a(2)                                    <------ZmHOX2a(2)                             ------>ZmHOX2a(2)                                   <---------ARR11(3)                           --------->ARR14(2)                                   <-----------ARR10           ---------->DOF2  <---------ARR11(3)                                   <---------AGP1   --------->ANAC58            <---------ARR14(2)                           <---------REM1(1) ----------->GT1<------ZmHOX2a(2)   <---------AGP1                          --------------->AtSPL8    --------->ANAC58            <-----------ARR10                  --------->ANAC58 --------->AGP1 ---------->DOF2               --------->ARR11(3)                  --------->bZIP60(2)------>ZmHOX2a(2)    ------->GAMYB        <---------CCA1(2) --------->ARR11(3)------>NtERF2   <---------ARR14(2)    <---------MYB52(2)  <---------HSFB2a(2) ----->ZAT14      --------->ANAC58 --------->ARR11(3)    --------->MYB46(3)  --------->HSFB2a(2) ---- ------ZAT14      --------->ANAC46 --------->ARR14(2)  --------->MYB52(1)   <---------LBD16--------->LBD16 --------AtSPL8 <---------ALFIN1  <---------CCA1(2) --------->ANAC46     <----------DOF2 <---------LBD16   acagaacttgaatacgttccacgccattgttgtaccagatctatgcatagtcaaaagcaacgatcgaaagaaaacctttctggatcttccttccggagta  22480300                                                                                       ----------->GT1                                ----------->GT1                                       <---------HSFB2a(2)                       --------->ANAC58                --------->GLK1(1)        --------->AHL20(2)               <---------WRKY38(1)              <---------LBD16  --------->ARR11(3)   --------->HSFB2a(2)  ---------->DOF2      --------->ANAC58       <---------LBD16    <---------ARR11(3)  <---------LBD16 ------>DOF2  --------->WRKY18(1)--------->AHL20(2)   --------->ARR11(3)      <----------DOF2     ---   aaaggaaagacgcgtagtcaaggccaaggaagaaatgaaataagtgtttctggggagatttcgaagaggtcttagggtttctttaaatctggaaacaaaa  22480400                                                                                  <---------ANAC58                                                                                  <---------ANAC58                       <---------AHL20(2)                                        <---------ZAT2                       --------->AHL20(2)                                        --------->ZAT2                       --------->YAB1                                           <---------ARR14(2)                    --------->YAB1                                              --------->ARR14(2)                   --------->ICU4                                           <---------LBD16                <------ZmHOX2a(1)                                       --------->ICU4              <---------TOE2(3)               --------->At4g35610    <------ZmHOX2a(1)           <---          <----------DOF2  <---------YAB1----------->GT1          <------ZmHOX2a(1)     <------ZmHOX2a(1) ------>YAB1  <---------TOE1(3)   ----------->GT1<-------TEIL----------->HVH21--------->LBD16    <---   tcaaaacaaggggtttaaggaataataatatgagagtgctaaattgtaagatgcagagaccccatgaaggaggaatgatgcggagcttgaggaatgagac  22480500                          <----------DOF2                        ------>ZmHOX2a(1) <---------ARR11(3)                       <---------------AGL15                      ----------------->AGL1                       <----------DOF2               ----                      <-----------------AGL3                       --------->TOE2(3)     <----------DOF2               <-------TEIL             --------->ANAC58           *TSS           <---------AHL20(2)             <---------GLK1(2)          --------->ANAC58        <-----------GT1  --------->AHL20(2)      ------>ZmHOX2a(1)--------------->AGL15                <----------DOF2      <---------AHL20(2)  <-----------GT1     <-----------------AGL1        --------->ANAC58             --------->AHL20(1)-- ------DAG2  <---------ARR14(2)  --------->At4g35610--------->ANAC58             <---------AHL20(1)<- -------DOF2 --------->ARR14(2)  <---------At4g35610--------->ANAC46       ----------->GT1     ------   tttttctccttcttggattcgttttcctcttttggagctaacaagaaatttcagacgaaacacttttaactttagatttgtaatttaatgacttttagtc  22480600          --------->At4g35610          <---------At4g35610        --------->HSFB2a(2)                                                                  <-------        <---------HSFB2a(2)                                                                 <-------GAMYB   <---------ATHB12                        ------->TEIL                <-----------GT1     --------->LBD16 --------->WOX13(1)                     --------->ANAC55(2)<-----------HVH21              --------->LBD16 ----->WOX13(1)                         <---------ANAC55(2)<-----------TGA1              <---------LBD16 ---------->CBF                     --------->AHL20(2)    <---------ANAC58               --------->LBD16 --------ATHB12                    <---------AHL20(2)     <---------ANAC58      <---------MYB52(1)  - ------>CBF                  ----------->GT1     <-----------GT1    ----------->GT1     <---------LBD16   aatcaatctttcagaagcccaaactcaaactgtgtaaataatatgtattttttactactagcgtcagaaaatgttacatttcggtaatttccccggttga  22480700                                                                                          <---------AHL20(2)                                                                                          <---------YAB1              --------->ARR11(3)                                                         <---------AHL20(2)             --------->YAB1                                                              <---------AHL20(1)           --------->ANAC46                                                              --------->AHL20(1)           --------->ANAC58                                                              --------->AHL20(2)           --------->ANAC58                                                           --------->YAB1        ------->GAMYB                                                                 --------->AHL20(2)      --------->ANAC58                                                               <---------YAB1      -------->P                                                                    <---------AHL20(2)  --------->ANAC58              <----------DOF2                                    --------->YAB1  --------->ANAC46   --------->LBD16                                       --------->HSFB2a(2)  --------->ANAC58  <---------ANAC46                                       <---------HSFB2a(2) ------ -P   --------->ANAC58--------->At5g28300                          --------->TOE2(3)--------->AHL20(2) --------->DOF2    <---------LBD16   --------->ARR11(3)         <-----------GT1   <---------YAB1   --   ttcaaagcaacccaagcatcttgcggtgaacatactttacatcttgaaaattccaaatttttgttttaaccttggttttggaagattataatataatcgg  22480800                                       <---------ANAC46                                       <---------ANAC58          <-----------GT1   --------->AHL20(1)         --------->AHL20(2)        --------->GLK1(2)          --------->YAB1   <---------AHL20(2)         <---------AHL20(2)    --------->YAB1                 -------->HAHB4   --------->AHL20(2)   --------->ANAC58    ----------->GT1   <---------YAB1      --------->ICU4  --------->AHL20(2)    --------->ANAC58 <---------ANAC46   --------->YAB1<----------ID1 ----->GT1          --------->YAB1     <---------ANAC58<---------GLK1(2)--------->YAB1 ------->ICU4      <-------TEIL   <---------YAB1--------->AHL20(2)   --------->WOX13(1)   aaaaattaattgagaaattgattcataagcatttttatgcttcgtgtggataaattagaatctcataataccaattacaacaaaatgatggtgaacatat  22480900                                                                                                 ----                                                                            --------->TOE2(3) -------                                                                       <---------YAB1     --------->AHL20(2)                         <---------ANAC58                           <---------AHL20(2)   --------->AHL20(2)                         <---------ANAC58 --------->At5g28300       <---------YAB1     --------->YAB1                       <-----------GT1   ----------->GT1         --------->AHL20(2)   <---------YAB1                  <---------AHL20(2)   --------->SPL7            <---------AHL20(2) --------->YAB1---    ------->TEIL  --------->AHL20(2)  --------->MYB52(1)       ------->TEIL --------->TOE1(3)<------- <---------ATHB12--------->AHL20(2)  <---------SPL7         <---------YAB1  --------->YAB1<---------AHL20(2)   acaatgaatttgatataaaaaaaattttcgtttcatggtcgaacggtgaatagtcgaagatgatgaattttttattaatcttaaaatcataataaataat  22481000                                                    <---------ANAC46                              ---                                                  ----------->GT1                                 ---                                                  <---------MYB46(3)                             <---                                           <---------YAB1 <---------TOE2(3)                      <---                                          <---------AHL20(1)                    ----------->GT1  ----                                          --------->AHL20(1)         --------->GLK1(1)          -----    ----------->GT1 ----------->GT1       --------->AHL20(2)         <---------GLK1(1)          ----- ------>DOF2       <---------TOE1(3)      <---------AHL20(2)   --------->MYB52(2)               ----- -->YAB1           <---------TOE2(3)     --------->AHL20(2) --------->TOE2(3)  ----------->GT1------- ------>DAG2--------->AHL20(2)           <---------AHL20(2)<---------YAB1     <---------TOE2(3)------ --AHL20(2) <---------AHL20(2)           --------->YAB1  --------->YAB1  <----------DOF2   <---------   aaagtaatgtaaatttaaattaaggtttaaaatgttagcaaaattatattagtggtttataatgttagtggaattctttagaggtttaaaatgttaccaa  22481100  Previous    Next  AGI:  At3g60800.1    Description:  zinc finger (DHHC type) family protein. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT4G22750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80505.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 22478148    to: 22480567    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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