Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->GLK1(2)                          <---------TOE1(3)                          <---------TOE2(3)                       --------->DOF5.7(2)                    <---------TOE2(3)                                   <---------ARR11(3)                    <---------TOE1(3)                               ---------->DOF2                  ----------->TGA1 --------->ARR14(2)           ---------->DOF2                ------    ---------->DOF2<---------DOF5.7(2)     <---------TOE2(3) <-----------HVH21         --------->ANAC46  <---------YAB1  --------->WRKY12 ---------->TaMYB80       ------>ZmHOX2a(1)        <-----------GT1 --------->YAB1<------MYB83        <---------ARR14(2)   --------->GLK1(2)      <---------TOE2(3) <--- -ICU4         <------MYB46(1)     <---------KAN4(2)   <---------GLK1(2)--------->ARR11(3)    -------   caatattaaaggctgataggttgacgttaaggttgagaatatgcaaaggttgacacagattcctgtcaaagaaagacatttaagaatttacgaaaaatga  22411000                                                                                          -----------                                                                                         >>>>>>>>>TBF1                                                                             <-----------HVH21                                                                            =================bZIP_DOF                                                                            <---------bZIP60(1) --->YAB1                                                                   --------->TGA1a  >>>>>>>> ------YAB1                 <---------ICU4  ----------->GT1                 --------->bZIP60(1) -->ICU4        ---------->DOF2         --------->ZAT6            <-----------GT1 ---------->DOF2----   tgaaaatgtttctcttaagaaagtagagcataatgtcgaataagactagtttatatggttttgtatttttactaagtcatgtcagaaagaagaagaaaaa  22411100                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC46                                                                                 --------->ANAC55(2)                                                                        ---------->DOF2                                                                    ---------->DOF2<---------MYB52(1) >GT1                  --------->ANAC55(2)                   --------->At5g28300 --------->ANAC46 >>GT-3b               --------->ANAC46    <------MYB83     ----------->GT1    <-----------GT1    <-- ----->AHL20(2)  --------->TOE2(3)         <------MYB46(1) --------->ZAT6 ----------->GT1----------->GT1   tatatgtactgtgttatagccttataagtaataggtttttgcatttggtgagtacttggtaacagtaaaaaaaagaaagttatacgttacgttgtgaaat  22411200                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                      <---------ANAC46                 --------->KAN4(2)                             <<<<<<<<CAMTA3    <----------DOF2               ------->TEIL                                   <-------MYC3      <------NtERF2         <---------YAB1                                       ------->MYC3     ------>NtERF2        <---------AHL20(2)<----------DOF2                    --------->ANAC46 <---------ANAC46       --------->YAB1<----------DOF2                       <---------ALFIN1   <---------ANAC58     --     <---------GLK1(2)    --------->TOE2(3)            <---------At4g35610    <---------ANAC58------- -------YAB1----------->GT1  --------->MYB52(2)        --------->At4g35610   <---------ZAT18 <-------   atgatcagattataatgtatattctttactttagttgaattgttgttgttgtaattcatctccacgcgtttgcgattagggcgcgtttgcgtttttatca  22411300                                                                                                    < --------->AHL20(2)                                                                                 - <---------AHL20(2)  <---------YAB1                  --------->PCF2                                 - ------->YAB1      <-----------GT1          ---------->DOF2           *TSS                          < ----->CBF----------->HVH21           --------->ANAC58           --------->ATHB12               ----- ----GT1<------------CBF              --------->ANAC58  <---------ALFIN1                    <--------   attttaaatgaattgacagtattacccttgagaaatgaacaagacaaatagcgatgtcccactctattcattagctctgtctaatctctctcgatcgacg  22411400                                  --------->ANAC58                                  --------->ANAC58                             --------->ANAC55(2)                             --------->ANAC58                             --------->ANAC58                             --------->TGA1a                             --------->ANAC46                             <---------O2                             --------->O2                             <---------TGA1a                             <---------ANAC55(2)------>NtERF2                                       -                  --------->ARR14(2) ------->TEIL<------NtERF2                                    <--                  ----------->HVH21  <-----------ARR10   <---------MYB52(1)                      ----              <---------LBD16======================================MYC_MYB                       <--- ---------ZAT14   <---------ARR14(2) --------->GLK1(2)<------------MYB.PH3(1)                -------- -------->At4g35610       ----------->HVH21    <---------LBD16                               ------>NtERF2 -------->ZAT14 --------->LBD16----------->HVH21--------->LBD16                             <-------- ---------At4g35610  <---------DEAR3(1)        --------->LBD16                             <---------LBD16 ->NtERF2    ------->TEIL<-----------HVH21    <---------LBD16         <---------LBD16   <---------GLK1(1) -ETT(2)  ----------->HVH21 <---------LBD16--------->MYB46(3)    <-----------GT1       ------->TEIL--   actgctctctctctgaaccggagacggtgtcacgggacgaatctaatcgccgggaaaccgttttttttttctctcggaaaatcgatttgaatctccggcg  22411500                                                    <---------LBD16                                                    ------>ZmHOX2a(2)                                                ----------->HVH21                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------ARR14(2)                                          --------->LBD16    <---------LBD16                      --------->ANAC46    ------>ZmHOX2a(2)                   <------------AtMYB77                                   ------ ---------->HVH21                      <---------At5g28300                     --------->DEAR3(1) ----ZmHOX2a(2)                       <---------ARR14(2)                     <---------At5g28300 ----->ARR14(2)          --------->ATHB12------->GAMYB                 <---------GLK1(2)     <------- ------ARR14(2)         <---------YAB1--------->MYB52(1)              <---------ZAT2         -------- ->LBD16               ------>ZmHOX2a(2)--------->MYB46(3)            <---------At4g35610    -------- -DEAR3(1) ----------->GT1 <---------WOX13(1)--------->ARR14(2)     <---------ZAT18          <------- ---->ZmHOX2a(2)     <---------AGP1   --------->ARR14(2)      --------->MYB52(1)<-----------HVH21   atctgatcgggatgagtaacatcgatctgattgggatgagtaaccgcgatctgatcgggatgagtaacagcgagcttctcaccgtcgagcctctcgatct  22411600                                                                       <---------TOE1(3)                                                             ------>ZmHOX2a(2)                                                           <---------AGP1                                                           --------->ARR11(3)                                                           --------->AGP1                                                           <---------ARR11(3)                                                           <---------ARR14(2) >ZmHOX2a(2)                                               --------->ARR14(2) --ARR11(3)                                             <---------ALFIN1 ->ARR14(2)                 <----------DOF2<---------CCA1(2)<------ZmHOX2a(2) ->ARR11(3)         --------->YAB1        <---------TOE1(2)<-----------ARR10              <---------REM1(1) --ARR14(2)   <----------DOF2            <---------AtLEC2 <---------CCA1(2)              <---------TOE2(3)   tcaattcccttgtaagctttattcataactctttcaatatttcgcatgtcttattgccccagatctatgtgttaagcttcttctctgatttgatgtagtt  22411700              ------>ZmHOX2a(2)             <------ZmHOX2a(2)                              <----------DOF2             --------->GLK1(1)                            <---------ANAC46             <---------GLK1(1)                            ----------------->AGL1            <---------AGP1                           <-----------RAV1(1)            <---------ARR14(3)                      <---------TOE2(3)            <-----------ARR10                      --------->YAB1            --------->ARR14(2)                     <---------ICU4     --------->ICU4            --------->ARR11(3)                    <---------ATHB51    <---------YAB1       <---------            <---------ARR11(3)                  --------->YAB1   ----------->GT1       <---------DAG2            <---------ARR14(2)               ----------->RAV1(1)<---------TOE2(3)      --------->TOE2(3)           <---------CCA1(2)                --------->DREB2C(2) <---------TOE1(3)   <-----------GT1   gaattgaagaagcagatctcttgctctctctatttgacgaacaagaccgacaataatgttgcctttaaggttataattctcttatttagccttatcaatt  22411800                   <---------ANAC58                   <---------ANAC55(1)                         --------->GLK1(2)                   <---------ANAC46             <---------TOE1(3)     ---------->DOF2                   <---------ANAC58             --------->MYB59<---------ARR14(2)      ----------->GT1                           <---------TOE2(3)  --------->LBD16     <---------HSFB2a(2)                   --------->ATHB12    ------->TEIL    <---------ZAT6    ----------->GT1--------->ANAC55(2)    --------->ICU4       --------->ARR14(2)  --------->MYB59 --------AGL1      <---------ANAC55(2)    <---------YAB1 <----------ID1--------->DAG2   ttggaatcgagaaaaattgtttcgtgtttctgaggcttctcgtgatgatttaggttaagacgacgaatccgaaaaagtattgtgttaggcctaatactgg  22411900  Previous    Next  AGI:  At3g60600.1    Description:  VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1); protein binding. similar to vesicle-associated membrane protein, putative / VAMP, putative [Arabidopsis thaliana] (TAIR:AT2G45140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24545.1); contains InterPro domain VAMP-associated (InterPro:IPR016763); contains InterPro domain PapD-like (InterPro:IPR008962); contains InterPro domain Major sperm protein; (InterPro:IPR000535) Range:  from: 22411370    to: 22413677    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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