Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <----------DOF2                                                   <---------YAB1                                                  --------->AHL20(2)                           <-----                                            <-----------GT1                                --------->ICU4                   --------->STY1(2)        --------->YAB1                            <---------ANAC55(2)                   <---------STY1(2)    <---------AHL20(2)       ---------->DOF2      --------->ANAC55(2)       ----------->HVH21             ----------->GT1  <-----------GT1    ----------->GT1 <---------ICU4   tatagcaagatgacagagagtagctagagtattgtagagaagttaattacaatattatactttacataaaagagagagtaagaagaatacataattagga  22401800                                          <---------ANAC55(2)                                          <---------ANAC58                                          --------->ANAC55(2)    <---------ANAC55(2)                                          <---------ANAC58       --------->ANAC55(2)                                 ------>ZmHOX2a(1)               ----------->GT1                                --------->TOE2(3)         --------------->AGL15    <---------WOX13(1)          --------->TOE1(3)         <---------------AGL15  --------->ATHB12        <---------WOX13(1)   <---------ANAC55(2) <---------YAB1        <---------YAB1   <-----------GT1  ----------------->AGL3               ------- --------->ICU4     --------->ZAT6  <---------YAB1       ----------------->AGL2     ----------->GT1 -ZmHOX2a(1) <---------ATHB12  ------>ZmHOX2a(2)     <---------AHL20(2)           ---------->DOF2   gacatgattgatcaaatcatttactctaattgatccttaatattacgttacatatataatccaaaataagtaatatagaatttagaaagtgaatataaga  22401900                                                                               --------->YAB1                                                                              <<<<<<<<<ARR1                                                                          ------------>CBF                                                                    <----------ID1                                                                    ----------->GT1                                                                  ---------->DOF2      ------------>CBF              --------->TOE2(3)   <----------DOF2        <---------HSFB2a(2)  <<<<<<<<<ARR2    --------->YAB1      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <----------ID1  <---------YAB1   <---------ATHB12   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->DOF2   <---------ATHB12    <-- -->ANAC46 <-----------GT1    <---------At4g35610        --------->HSFB2a(2)--------->WOX13(1)  <----   aactaatcaaaattaacctttgtttgaacggtagcggttttagttatagtttttggtttctaaaaagaaaaagaaaaacaatcatagtttccaataagct  22402000                           <------ZmHOX2a(1)         <---------AHL20(2)--------->YAB1                                       <----------DOF2  <---------TOE1(3)    --------->TOE1(2)                                  <------------CBF  <---------TOE2(3)    --------->TOE2(2)                                 --------->YAB1 ---------->DOF2    <---------CCA1(2)                                    --------->ATHB51       ----- ---------TBP    ------>ZmHOX2a(1)                                      <---------YAB1   xxxxxxxxxxxx ------DOF2     --------->TOE2(3)                                       <---------AHL20(2)    -------   ttttaaagttttttatttcctcaaatctaggataactataagtcttaaaaaaaaaaaaaaacaactagaagtctataattgtctttttagtagaaaccta  22402100                                                                      --------->AHL20(2)                         ------->GAMYB                                <---------AHL20(2)                        <---------MYB55(2)          ----------->GT1   ----------->TBP                        <---------MYB111(1)      ---------->DOF2    --------->AHL20(2)                        --------->MYB46(3)   --------->TOE2(3)      ----------->TBP    --------->GLK1(2)                        <---------MYB111(2)  --------->TOE1(3)     <---------AHL20(1)  --------->ARR11(3)         <---------MYB52(1)            --------->YAB1             --------->AHL20(2)   <---------ARR11(3) ----->DOF2    <---------AHL20(2)      --------->AHL20(2)       --------->AHL20(2)    --------->CCA1(1) xxxxxxxxxxx>smallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->AHL20(1) --------->RVE1(1) -->TOE2(3)----------->GT1-------->P   <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   aagctatttcagtttgttaaattctaacaaccagaaactaattaaaaccttgaaagctaaaaacaaaaatatatatataagctctaaaaaatctctaccc  22402200                              <---------CCA1(2)                 <---------ICU4     --------->GLK1(2)     ------>ZmHOX2a(1)        <---------YAB1  <----------DOF2   ---------->DOF2    <---------GLK1(2) <---------ANAC58              <---------TOE2(3)   <----------DOF2    <---------ARR11(3)<---------ANAC58         <----------DOF2<-----------GT1    <---------YAB1   attcaagattctaaatcaaacatggcttcctcatctctcaaatgtttttcttttatcgttgttcttacaactttctttgcaatctcattgaagccatgtt  22402300                                     <-------MYC2                                     ------->MYC3                                     ------->MYC2                                     <-------MYC3                                     ------->PIF5                                     <-------PIF5                                    <---------TGA1a                                    <---------O2                                    --------->TGA1a                                    <---------bZIP60(2)                                    --------->ANAC55(2)                                    <---------ANAC46                                    <---------ANAC55(2)                                    --------->O2                                <-----------HVH21                             <---------ATERF1(1)                             --------->LBD16                             ------>NtERF2                            --------->RRTF1(2)                            --------->DEAR3(1)                            --------->RAP2.6(2)                            --------->RAP2.3(2)                            --------->DREB2C(2)                      <-----------RAV1(2)                            <---------ATERF1(2)                    <---------ALFIN1                            --------->RRTF1(3)                     --------->AtMYB61                            --------->RAP2.3(3)          --------->ARR11(3)                            --------->ATERF1(2)         <---------HSFB2a(1)                           <---------LBD16              --------->HSFB2a(1)                           --------->ATERF1(1)          <---------HSFC1(2)                           --------->RAP2.3(1)     <---------HSFB2a(2)                          ------>NtERF2        ------>NtERF2 ------>ZmHOX2a(1)                          <---------ATERF1(1) <---------ANAC58    --------->ANAC58               ------>MYB46(1)<------NtERF2   <---------ETT(2)    --------->ANAC58      --------->AHL20(2)               ------>MYB83--------->ERF1     --------->ETT(2)    <------NtERF2         <---------AHL20(2)        --------->AHL20(2)--------->ABI4(1)   <---------ANAC58  --------->PCF2        <----------DOF2        ======================================bZIP_DOF  --------->HSFC1(2)           --------->TOE1(3)        ---------->DOF2  --------->DEAR3(1)   <---------RAP2.6(2)------>NtERF2       --------->TOE2(3)  ----------->RAV1(1) <---------ALFIN1  <---------SPL7 ----------->ARR10     --------->WOX13(1)   attgccacaataaaacccactggaacaccgccggcatcacgtggtatggcgaccgagaaggtcctggcaccacaggtattaatcaaacctttaattgttc  22402400                                                                                      --------->CCA1(2)                                                                              <---------ANAC58                                                      ----------->GT1         <---------ANAC58                                                 --------->ANAC58          <------ZmHOX2a(1)                                                 --------->ANAC58        --------->ALFIN1                                      --------------->AGL15             <------ZmHOX2a(1)                                     <-----------------AGL1          <-----------RAV1(2)                                   <-----------GT1   <-------TEIL <---------ZAT14    --------->ARR14(2)                                <---------ICU4  ------->TEIL      --------->ZAT14    <---------ARR14(2)      --------->YAB1      <-----------GT1 --------->ARR14(2)      --------->ZAT18 <---------ANAC46   caatacacttataaaactcgaaaacattttcccatatttacctatatatgcacggttcgtaaaatatgtacacaggaggagcttgtggatatggtgatgc  22402500                                       <---------ARR14(2)                                       <---------ARR11(3)                 <---------ANAC46                                       --------->ARR11(3)               <---------PCF2                                       --------->ARR14(2)            --------->ALFIN1                                      <------ZmHOX2a(1)              <---------ANAC46   <------MYB83                                    --------->SPL7                 <---------MYB46(3)   <------MYB46(1)                                   <------NtERF2                  --------->ALFIN1     <---------MYB46(3)                                  --------->LBD16           ---------->DOF2            --------->MYB55(2)                                <---------LBD16          --------->ANAC58 <---------ANAC58    -------              --------->SPL7   --------->At4g35610       --------->ANAC58 <---------ANAC58    <------             --------->SPL1(1) <---------At4g35610  ---------->DOF2--------->ALFIN1   --------->ALFIN1   agtggcaaaacacccgtacagatgtatggtttcagccggaggaccttcattgttcaaagacggaaagggttgtggggcttgttacagggtgggtatttat  22402600                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                              -------                                                                                              <------                                                                                              <------                          <---------YAB1                                                      -------                         --------->ARR11(3)                                               <---------MYB52(1)                         <---------ARR11(3)                                           ------>MYB46(1) <-----------GT1        --------->YAB1                                                ------>MYB83 -->AHL20(2)           <---------YAB1          <-----------GT1                      --------->AtMYB61 ---AHL20(2)  --------->ATHB12     <---------REM1(1)-------->P                     --------->MYB46(3)   atataacaatatcagttcattgaatatgatatttgtaatgtagaactatatactaaccatgtttatatgttatagcttaaatgcgaccatccgttgtgca  22402700  Previous    Next  AGI:  At3g60570.1    Description:  ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5). Identical to Expansin-B5 precursor (EXPB5) [Arabidopsis Thaliana] (GB:Q9M203); similar to ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4) [Arabidopsis thaliana] (TAIR:AT2G45110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70608.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IP Range:  from: 22402222    to: 22403438    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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