Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ARR11(3)                                                                                  --------->YAB1                                                                          --------->ICU4                                                                        --------->YAB1    --------->At4g35610                                                                       <---------YAB1--------->YAB1 -                                                                  <---------AHL20(2)<---------YAB1 <-     <---------ANAC58                                            --------->AHL20(2)--------->ARR11(3)     <---------ANAC58  <---------AHL20(1)                    <---------YAB1  <---------YAB1  <-------TEIL -MYB46(3)             <---------ARR11(3)------->TEIL     <----------DOF2 <---------YAB1  <---------At4g35610   agacatttcttgtctagtttgacaatatatacacacatatatgtatatgatatatgcatgcttttgatttaatatgatgatgaatgatcatcagctacat  22373200                    <---------ARR14(2)                    --------->ARR11(3)                    <---------ARR14(3)                    --------->ARR14(2)                    <---------AGP1           --------->ALFIN1          ------->MYC3          <-------PIF4          <-------MYC4          ------->MYC2          ------->PIF4          <-------MYC2          <-------MYC3          <-------PIF5          ------->PIF5          ------->MYC4 ----------->HVH21         <---------TGA1a         --------->TGA1a <---------At5g28300         <---------ANAC55(2)         <---------O2 ------>ZmHOX2a(2)         --------->ANAC55(2)         --------->O2<------ZmHOX2a(2)         <---------bZIP60(2)  <---------ZAT14                                <---------YAB1        ------------>OsbHLH66 --------->ZAT14                             --------->ICU4   ================bZIP_DOF--------->DEAR3(1)                        <---------AtLEC2   ---------->DOF2  <-----------ARR10                       --------->At5g28300----------->GT1     <- -------->CCA1(2)   --------->ARR14(3)               <---------AHL20(2) --------->YAB1         <----- --------ARR11(3)   <---------ARR11(3) <------ZmHOX2a(2)   ----------->GT1<---------YAB1    ---------   agatataaagcacgtggcacaagatctcaccgtctactgcgatctaaatctgtattatatgctgtaaatatgcatgatgatgagtaaattacacacataa  22373300                                                                                                =====                                                                                                -----                                                                                              <------                                                                                          --------->GLK1(2)                                                                               <---------ANAC58 =====                                                                       ----------->HVH21--------->HSFC1(2)                                           ----------------------->TaNAC69(2)  <---------ANAC58 -----     <---------ANAC46                    <---------ZAT6            --------->ZAT14 <---------HSFB2a(2)   <-------MYC3                          --------->ALFIN1          <---------ZAT14 --------->HSFB2a(2)   ------->MYC3          <---------ANAC55(2)  ---------->DOF2 ------->PIF5   --------->ARR11(3) ----- ------TEIL      <XXXXXXXXXXXXXXXXXXXXMIR835-5P               <-------PIF5   <---------ARR11(3) ----- ----ICU4       ---------->DOF2   --------->TOE1(2)       <---------ZAT18---------->DOF2--------->HSFB2a(1) >ANAC46    <---------ZAT6        --------->TOE2(2)     <---------TOE2(3)============================   gtacatgtggtatagagataaagaaatatgtaagaacatacgagtgttgaaagcgattaaggcacttgctgcagtgaaagagcttgtcgaagaatcccac  22373400        --------->AtLEC2        --------->ANAC58        --------->ANAC46       <-------MYC2       ------->MYC3       <-------MYC3       ------->MYC2    <---------ALFIN1            --------->MYB46(3)  <---------ALFIN1             --------->CCA1(2) --------->ANAC46              =========================HOX2a_HOX2a =====================MYC_MYB  <------ZmHOX2a(2)            --------->At4g35610 ---->ANAC46                  --------->ARR11(3)         --------->At4g35610 ---ALFIN1   <---------ALFIN1 <---------ARR14(2)   --------->AHL20(2)              <------ZmHOX2a(1) =================================bZIP_DOF       <---------------AGL15     --------->ARR14(2) ---->bZIP60(2)        <----------DOF2           ------>ZmHOX2a(1)         <---------ARR14(2) ---->TGA1a----------->RAV1(1)--------->ARR14(2) --------------->AGL15     --------->GLK1(2) ---->O2--------->ANAC58      --------->AGP1    --------->TOE1(3)     ----------->GT1 =====bZIP_DOF------->GAMYB   <---------ARR11(3)--------->TOE2(3)  --------->MYB52(1)   <------ZmHOX2a(1)   atcaccacacatgcaacacactcttctttcaagatccaccatttttgtttccttaaattagcagaagacagacggagaatatgaaggagaggaagagttg  22373500                                                                                          <---------HSFB2a(2)                                                                           --------->CCA1(2)                                                                          <---------ARR11(3)                                                                      ---------->DOF2     --------->HSFB2a(2)                                    --------->DAG2              ----------->GT1<---------AHL20(2)                                --------->AHL20(2)             <------ZmHOX2a(1)  <------------CBF                               --------->AHL20(2)       ---------->DOF2   --------->ARR11(3)                   ----------->GT1 ---------->DOF2    *TSS    ----------->GT1  --------->AHL20(2)   gaagagaatgagagagagagagagataaacaaaataaaaaagggaagaattgattctataaagaaggagaaaaaaagatatataaattggttatggaaaa  22373600                   <-------TEIL  --------->YAB1                                 <---------YAB1      <                <------MYB83  <---------ICU4                           --------->YAB1             <--                <---------DEAR3(2)     <---------AHL20(2)       --------->AHL20(2)    ----------->GT1               <---------DREB2C(2) --------->ICU4              --------->AHL20(2)     <---------ANAC46        --------->ANAC46     --------->ICU4                    <---------AHL20(2)--------->YAB1   <--   <---------AHL20(2)        <---------YAB1               <<<<<<<<<MYB98    ----------->GT1      ----   --------->AHL20(1)      --------->YAB1               ----------->GT1--------->AHL20(2)       <----   <---------AHL20(1)     <---------AHL20(2)     --------->ANAC58   --------->YAB1    <---------ANAC58  --------->AHL20(2)    --------->YAB1 --------->AHL20(2)----------->GT1   --------->DAG2    --------  --------->YAB1<------MYB46(1)  --------->AHL20(2)    --------->AHL20(1) ---------->DOF2    <------- <---------YAB1--------->MYB59--------->YAB1     --------->ANAC58  <---------AHL20(2) <---------ANAC58   cttattatattcgcaagtcggtccataaataataataatatttaaaaaaccaagaaatatgttaaataaataataaaaaagtataatagcgtaataaggc  22373700                                                  ----------->GT1                                                 --------->ALFIN1                                               <---------ANAC46                                               <------MYB83                                               <------MYB46(1)                    --------->ZAT14           <---------AtMYB61             <---------AHL20(2) --------P       <----------DOF2              --------->MYB111(1)       --------->YAB1 ----MYB46(1)<--------P                       --------->MYB111(2)       --------->AHL20(2) ----MYB83 --------->ZAT2               <---------ANAC58            --------->AHL20(2) ----->MYB111(1)<---------ANAC58        <---------ANAC58         --------->TOE2(3) -------RAV1(2) <---------ANAC58       <---------ZAT2          ------->TEIL--------->YAB1 ->DAG2  <-----------RAV1(2)           --------->ZAT2     ---------->DOF2 <---------YAB1 --TOE2(3)<---------TOE2(2)      <-------GAMYB<---------DEAR3(1) --------->TOE1(3)   aggtagagaccgcaggttgctttgcagtcgttttcagttggagcttgggaggtggagaaacaaagaaccttaaattataaaaatcgactatttgtaaatg  22373800                                                                                                  <--                                          <---------DAG2                                          ---                                       <---------TOE1(2)                                       <-----                                    <---------ANAC58                                           ------                                    <---------ANAC58 <---------------AGL15                     <-----                                 <----------DOF2     <----------DOF2  ---------->DOF2          ------                                <---------ANAC58     --------------->AGL15                     <-----                                <---------ANAC58    <-----------------AGL1                    <------                              <-----------GT1 <-----------GT1<------ZmHOX2a(1)                <------                           ----------->GT1<----------DOF2  <---------TOE2(3)               <-------TEIL   actattttgcccttgtttttttgtttgggatgttactttcgtagcttttttctgtcttttttaggaatttgagaaagagagaaacttgtgggatgcatat  22373900    <---------DAG2    <----------DOF2 --------DOF2 ------------------>WRI1                               --------->ICU4 ----ARR11(1)                            <------MYB46(1) --->ARR11(3)                            <------MYB83  <---------YAB1 ----ARR11(3)                            ----------->GT1                                           <- --->ARR14(2)        <---------ANAC58    <---------MYB46(3)                                        -- ----ARR14(2)        <---------ANAC58  <---------MYB55(1)    <-----------GT1              <---------- ---GLK1(1)   <---------MYB52(1)      <---------MYB52(1)<---------ICU4                  --------->YAB1 ---CCA1(2)  <-------GAMYB<---------WOX13(1)        <-------TEIL                        --------->AHL20(2)   ctttgactttatctccgttgagagcgtgatagacactcccgtttggttagaaggctcataattttacaaatagcattttcttctaactaattatacaatt  22374000                                                                                  <---------TOE2(3)                                                                                  <---------TOE1(3)                                                                                  <---------YAB1                                                                                --------->YAB1                                                                                <---------ICU4                                                                                -------->HAHB4                                                                               <---------ATHB51              ---------->ID1                                                   <---------YAB1       --------->AHL20(2)                                                      --------->ICU4       <---------AHL20(1)                                                    --------->YAB1    --------->AHL20(2)                                                      <---------YAB1   --------->AHL20(2)         <---------GLK1(2)        <-----------GT1      <---------AHL20(2) --------AHL20(2)     <------MYB83      ------>ZmHOX2a(2)               ----------->GT1 ------->AHL20(2)     <------MYB46(1)  --------->GLK1(1)            --------->ATHB12          ------- -GT1  <---------AHL20(2) ---------->DOF2    <---------ANAC46      <---------ATHB12----------->GT1   tttaaataaaaaatttgttgtatttggtgaaagaaactctgatctcttcgtgaaaataaactgcttcaaatgatttgtataattatggttaaaacaaaaa  22374100  Previous    Next  AGI:  At3g60520.1    Description:  zinc ion binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02070.1); similar to unknown [Populus trichocarpa] (GB:ABK95332.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 22372505    to: 22373554    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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