Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------WOX13(1)                                                               <---------WRKY18(1)                                                            <---------ANAC58                                                            <---------ANAC58                                                         <------NtERF2                                                         <---------MYB52(1)                                    --------->LBD16     <-----------HVH21                                    ----------->GT1    --------->DEAR3(1)                                 ------->TEIL        --------->At4g35610                                 --------->MYB52(1)  <---------At4g35610       <---------YAB1        --------->SPL7       <---------MYB52(1) -------MYB52(1)           --------->TOE1(2)      --------->DOF5.7(2)                               < ---->LBD16              ------>ZmHOX2a(2)       <-----------HVH21                                 <- ------>GT1         <---------TOE2(2)         --------->LBD16<----------DOF2                   <----- ---LBD16           <---------TOE1(2)       --------->DEAR3(2)----------->HVH21     <---------GLK1(1)   gttaattttgtcattgtcttcgtatgatccctacgaaccggataaaaccggcgttagccgtcgcttgactgattcagtctatattgaaatctctgatttt  22348400                                                                    --------->ATHB51                                                                    --------->AHL20(2)                                                                   --------->ICU4                                                                   <---------MYB52(1)                                                           --------->YAB1                                                           <---------ICU4                                                          <---------YAB1                                                     <---------RVE1(1)                                                     <---------CCA1(1)                                                    --------->AHL20(1)              --------->ARR14(2)                    <---------ARR11(3)              --------->GLK1(2)                     --------->ARR11(3)              <---------ARR14(2)                ---------->DOF2 <---------YAB1  --------->TOE2(3) ---------AHL20(2)                             --------->AHL20(2)  <---------YAB1 --------AHL20(2)                    <---------AHL20(2)  <-----------GT1  <<<<<<<<<GATA-1           - ----AHL20(2)<---------GLK1(2)      --------->AHL20(2)  --------->YAB1   <-----------GT1           <-   ttttattttggttcagaatttgccttcacttagtaattttaaattcaaataaaagatattatcatcaccattatttatctattctcaattgtttcaaatt  22348500           <------MYB46(1)           <------MYB83          <---------AtMYB61          --------->MYB59        <---------MYB52(1)     <---------ANAC58     <---------ANAC58     <---------RAP2.6(2)                              --------->TOE2(3)     <---------ANAC46                              <-----------GT1    <---------LBD16                            <---------AHL20(2)                                   -  <---------WOX13(1)                           --------->AHL20(2)                                  -- <---------ANAC58                             --------->AHL20(1)         <---------ANAC55(2)      <-- <---------ANAC58                             <---------AHL20(1)        <-------TEIL  <---------At4g35610 -------->ATHB12           <-----------GT1    <---------AHL20(2)   --------->AHL20(2) --------->At4g35610 --------YAB1   <-----------RAV1(1)           --------->AHL20(2)<----------DOF2    <--------P   -----   tttgattgcggtttggttttgttgtcgattaacctctgattttctaaatttatttacatcaacatacttttaaatacataaactggttagctaagtctca  22348600             ----------->GT1     --------->ANAC58                          =================================HOX2a_HOX2a     --------->ANAC58          <---------ARR14(2)                                    --------->LBD16   ---------->DOF2             --------->ARR11(3)                        ------>ZmHOX2a(2) -------->WOX13(1)             --------->ARR14(2)             <---------ALFIN1     <---------LBD16 ------->AHL20(2) <---------YAB1               <------ZmHOX2a(1)       <---------ARR11(3) -------ATHB12 --------->ICU4  --------->GLK1(2)         --------->ARR14(2)      <---------ARR14(2) ---->WOX13(1)<-------GAMYB    <---------ARR11(3) ----------->RAV1(1)  --------->ARR11(3)   <--------   atcaattaagcaatgtggttattagtcatggagtatctttcaaattcaaggaccacaaaaatccccaatccatgatcttgtagtttccggtttagccggt  22348700                                                                                   ---------->DOF2                                                                                --------->AHL20(2)                                                                               --------->AHL20(2)                                                                       --------->AHL20(2)                                                                    *TSS   --------->AHL20(2)              ----------->GT1    <---------YAB1                   --------->AHL20(2)              <---------YAB1    <-----------TBP             ----------->GT1<---------AHL20(2) ---------->ID1         --------->DAG2                <---------------AtSPL8--------->AHL20(2) -LBD16 <---------YAB1 ---------->DOF2         ---------->DOF2    <---------AHL20(2)--------->DAG2   tttgtccattacgatgatgttaaaaaaaagttgtttttataaaacatagaaaagagaaggaacagaaattaaaaaaaataaataaaaaagcgccatgtat  22348800                                              --------->MYB46(3)                                          --------->At4g35610                                         --------->RAP2.6(2)                                       --------->At4g35610                                       <---------At4g35610                                       --------->ZAT2                                    --------->ZAT2                                    --------->At4g35610                                    <---------At4g35610                                   ----------->RAV1(1)                                 <---------ZAT2   --------->YAB1                                 --------->ZAT2--------->WOX13(1)                             -------    <---------ATHB12             --------->At4g35610                 --------->At4g35610   --------->At4g35610  --------->YAB1                 <---------At4g35610    ----------->RAV1(1)                <---------At4g35610  --------->WOX13(1)       <-----------HVH21----------->RAV1(1)      <---------At4g35610<---------MYB52(1) --------->MYB46(3)    ---------->DOF2----------->RAV1(1)          --------->ZAT18    --------->LBD16   acaacaatcacttccaacgtagtctcaaaggtcacagcagcagcagcaacaatcagagcaacaatggagtctgctaaatcaaaaaatcccgatagctacc  22348900                ----------->HVH21               <-----------HVH21                                                ------>ZmHOX2a(2)               <-----------TGA1                                                =============HOX2a_HOX2a              <---------ANAC58                                                 <------ZmHOX2a(2)              <---------ANAC58                                                <---------ARR14(2)              <---------ANAC55(2)                             --------->At4g35610    ------>ZmHOX2a(1)  <---------ARR11(3)                                 <---------ANAC58         --------->ARR14(2)  --------->ARR11(3)                                 <---------ANAC46 <---------ARR11(3)  --------->AHL20(1)                                 <---------ANAC58 --------->ARR11(3) --------->CCA1(1)        ------>ZmHOX2a(2)  <---------ALFIN1 <---------ZAT2  <---------ARR11(3) --------->RVE1(1)   --------->At5g28300   <------ZmHOX2a(2)  --------->ZAT2  --------->ARR11(3)----- ->P          --------->ANAC55(2)         --------->ARR14(2)  <---------At4g35610 ------>ZmHOX2a(1)   aaaatatcttgatgatgcgtcacggtgatcgcattgacaaaatcgatccactctggcttgatacagctgcgagaccttgggatcctcctctcgttcaaga  22349000                                      ------>ZmHOX2a(2)                               --------->ARR14(2)                          --------->MYB52(1)           <---------ANAC58    <---------GLK1(2)           <---------ANAC58    <---------ARR14(2)          <---------At5g28300          <---------TOE1(2)<---------At4g35610     <-----------GT1       <---------ANAC58  <---------WRKY38(1)<------ZmHOX2a(2)       <---------ANAC46  <---------WRKY12  --------->ARR14(2)       <---------ANAC58  <---------WRKY45  <---------ARR14(2)      <-------TEIL      --------->WRKY18(1)--------->AGP1 <-----------GT1     <----------DOF2       - ---->RAP2.6(3)        <-----------HVH21  --------->At4g35610          <---------CCA1(2)            <   cggtatggttcgtgcgtttcaaactggtcaacggattcgatctcagatccaatttccgattcaccgtgtcttcgtctctccttttatccgatgtatacag  22349100                                                                            <---------ATHB12                               <------NtERF2                      <-----------TGA1                              ------>NtERF2                       <-----------HVH21                             --------->RAP2.3(2)                 --------->TGA1a                             --------->RAP2.3(3)                 <---------O2                             --------->DEAR3(1)                  --------->O2                            --------->ATERF1(1)                  <---------ANAC55(2)                            --------->RAP2.3(1)                  --------->ANAC46                           ------>NtERF2                         --------->ANAC58                           --------->LBD16                       <---------bZIP60(1)                  --------->ZAT14              --------->ANAC46  --------->bZIP60(2)                  --------->At4g35610          --------->ZAT6    --------->TGA2(1)                  <                  <---------At4g35610          --------->ANAC58  --------->bZIP60(1)            <----                  --------->ZAT2         <------ZmHOX2a(2)       <---------TGA1a              <------      --------->LBD16      <---------ATERF1(1) --------->ANAC58  <---------TGA2(1)            <------ -------->At4g35610       --------->DEAR3(1) --------->MYB52(1)  --------->ANAC58         --------->TOE1(3) ---------At4g35610       --------->ANAC46  ------>ZmHOX2a(1)   <-----------STF1         --------->At4g35610   actgcttccgaagtcatcgctgctctctccgccgtcgatttcgatcctaacgctacttcgtccaaagacgtcacttcaatcgataaatataagcttaagg  22349200                                                                     --------->ATHB12                                                    --------->ARR14(2)                                                ------->MYC3       <---------MYB52(1)                                                <-------MYC3      <-------GAMYB<---------------AGL15 ---------At4g35610                  <---------AtMYB61      ------->TEIL       --------------->AGL15 -------HVH21                     <----------DOF2   <---------ARR14(2) <---------WOX13(1)       <---- ---TOE1(3)                    <---------ARR11(3)   ------->TEIL <-----------RAV1(1)            ----- ---TOE2(3)                    --------->ARR11(3)  <---------CCA1(2)<---------YAB1    <---------TOE2(3)   tcagataatcgctgtaatcgccttcgattttgaaatcttttggtgttccatgtgtatctgtgaatctctgttgattgaattctagtttaagaatgttgag  22349300  Previous    Next  AGI:  At3g60440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70569.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078); contains InterPro domain PRIB5 (InterPro:IPR012398) Range:  from: 22348768    to: 22350421    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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