Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <-----------GT1                        --------->At5g28300    --------->YAB1                   <---------REM1(2)     <---------TOE2(3)                   --------->ZAT14       --------->ANAC55(2)                   --------->SPL7        <---------ANAC55(2)                   <---------ZAT14       <---------ANAC46         --------------->AtSPL8                 --------->LBD16    <---------ICU4--------->YAB1 <---------ANAC46               --------------->AtSPL3   <---------LBD16         --------->ATHB12             <---------ARR14(2)    --------->AHL20(2)         <---------WOX13(1)             --------->ARR14(2)    <---------AHL20(2)        >>>>>>>>>ARR2       --------->AtLEC2----------->GT1 <-----------GT1      --------->ATHB12 -----GT1    ------------------>SPL14  --------->MYB52(1)  <---------YAB1                           -   caactcttcatgcactatccgtacacagtaaaaccaaaaaattacggattaataacaaattttgattgtttggacctctatccattttgtatttttggac  22345000                      --------->TOE2(3)                   <---------AHL20(2)               <---------ICU4               --------->ATHB51                                              <---------ANAC55(2)               --------->AHL20(2)                                            --------->ANAC55(2)           --------->AHL20(2)                                              --------->AHL20(2)           <---------AHL20(2)                                           <---------ICU4         --------->ANAC55(2)                                            --------->YAB1         <---------ANAC55(2)                                           --------->AHL20(2)      ------    --------------->AtSPL8                     <----------DOF2------->TEIL <-----------GT1     <-----    <---------------AtSPL8                  ---------->ID1 --------->ANAC55(2)--------------->AGL15   <---------YAB1  <-----------GT1  --------->ANAC55(2)    <---------ANAC55(2)<---------------AGL15 <---------ICU4<---------AHL20(2) <-----------GT1   --------->ANAC55(2)--------->ICU4  ---------->DOF2 -------->ICU4--------->ICU4<---------AHL20(1) ------>ZmHOX2a(1)  --------->AtLEC2----------->GT1   tacttattagtacttaattatttacattagtatattttacatattggtccttttatgtattatgtatcatgcattaattacatattgtagaaagagattt  22345100                ---------->DOF2             <---------MYB59          >>>>>>>>>>WRKY6          >>>>>>>>>>WRKY11         --------->WRKY38(1)         --------->WRKY12                                        --------->AHL20(2)   <---------AHL20(2) --------->AtSPL8          >>>>>>>>>TBF1              <---------MYB46(3)              --------->AHL20(2) ----------AtSPL8   ---------->DOF2                  <---------AtMYB61       <---------O2   gtactaactagttgacctaaaagaaagaagaagaagagagagtcgtctatatcgagtggttttggtattaattcttatcacgttggatttatatagatgt  22345200                                                                                 ------>ZmHOX2a(1)                                                                               <-----------------AGL1                                                                       --------->ANAC46                         <---------ANAC58                       --------->HSFC1(2)                         <---------ANAC58               <---------ANAC58       ----------------->AG                    <---------YAB1                      <---------ANAC46       <-----------------AG                  --------->YAB1                        <---------ANAC58       ----------------->AGL1                  <---------ICU4                    <---------ANAC58   --------->ANAC58                 <---------ATHB12                   <---------ANAC46   --------->ANAC58   ---------->DOF2                 --------->ICU4                     <---------ANAC58  ------>ZmHOX2a(1) <------ZmHOX2a(1)            --------->YAB1        ---------->DOF2<----------DOF2<---------HSFC1(2)    <---------TOE2(3)         --------->YAB1  <---------ANAC46     <-----------GT1   --------->At4g35610<xxxxxxxxxxxxxxxxsmallRNA(i)   aaacttcgtagtaataacaatgatgagtcgtgttttaaaagaattttgttactttcttgtgtgataagcttcctcgcaatttcctactgaggaaaagaaa  22345300                                                                                                    <                                                                                        <---------HSFB2a(2)                                                                                  <---------------AGL15                                                                                 ----------------->AGL2                                                                                 ----------------->AGL3                                                                --------->ARR14(2)--------------->AGL15                                                                <---------ARR14(2)<---------ALFIN1 *TSS                                                         <---------ANAC58       ------>MYB83       --                                                         <---------ANAC46       ------>MYB46(1)    <-      <-----------GT1                                    <---------ANAC58  <-----------GT1        ---     <-----------GT1              <----------ID1     <------------CBF  --------->AHL20(2)      ------   --------->YAB1         ----------->GT1       <---------ARR11(3)     ----------->TBP  --------->HSFB2a(2)   tgcaattttaacttccttcaaaagtttatagtaaaaaaaacaaaactcaacatctcattgcttgcatatatgtataaatacctcccacttctagtaacaa  22345400                                     --------->ATHB12                                     --------->YAB1                          --------->At4g35610     --------->AtMYB61      --------->ICU4                          <---------At4g35610  --------->RAP2.6(2)   <-----------TGA1             --------->ANAC58       <---------ATHB12                 <-----------HVH21     <-----------------AGL1       --------->WOX13(1)                --------->ANAC55(2) ------ZmHOX2a(2)       --------->ZAT18      <------NtERF2          <---------ANAC58            ----- ------->ARR11(3)       <---------DEAR3(1)  ------>NtERF2           <---------ANAC58          <------ --------ARR11(3)      --------->ATERF1(1)  <---------ATERF1(1)------>ZmHOX2a(1)              <------ ------>YAB1 --------->ANAC58   <---------ATHB12------>NtERF2  ========================HOX2a_HOX2a ---->DOF2---------->DOF2 <------NtERF2 <---------DEAR3(1)   ----------->RAV1(2)------>ZmHOX2a(2)  <-   agatcacaccgagaaaggcaatggagtcggctaaatcaatcatcggtggccaccaaaatgtcatcctgatgcgtcatggtgatcgactcgacaatttcga  22345500                                  --------->MYB46(3)                                  ------>ZmHOX2a(2)                                  <---------ABI4(2)                                  ===============================HOX2a_HOX2a                                 <------ZmHOX2a(2)                                 ================================HOX2a_HOX2a                                --------->ARR14(2)                           --------->TOE1(2)                 ------>ZmHOX2a(2)                --------->At4g35610         <-----------------AGL1 <----------DOF2 ---->ANAC46    <---------At4g35610<---------ALFIN1        <---------ARR14(2)        <---------ARR14(2) ---ANAC58      <---------ZAT2  <---------ARR14(2)         --------->ARR14(2)        --------->ARR14(2) ---ANAC58    --------->MYB46(3)--------->PCF2            <------ZmHOX2a(1)          --------->GLK1(2) --------ALFIN1 --------->ZAT2 <---------PCF2     --------->RAP2.6(3)        <-----------HVH21   gccactctggacttcaacagctgcgagaccgtgggatccaccgcttgctcaagacggtaaggatcgggcctttagaactggtcagagaatccggtctcaa  22345600                                                                                 <---------At4g35610                                                                                 --------->ZAT2                                                                                 --------->At4g35610                                                                        ------>NtERF2<------NtERF2                                                                        <---------ATERF1(1)                                                                        <---------RAP2.6(3)                                                                       <---------ATERF1(2)                                                                       --------->DEAR3(1)                                                                       --------->ATERF1(2)                                                                       --------->RAP2.6(2)                                                                      --------->ATERF1(1)                                                      <---------At4g35610<------NtERF2                                        --------->LBD16               <---------RAP2.6(2)             <---------At5g28300        <---------At4g35610      <---------MYB46(3)--------->DEAR3(1)            <-----------GT1             --------->At4g35610 --------->LBD16  <-----------HVH21    <---------ARR14(2)               ------>ZmHOX2a(1)--------->At4g35610--------->ATERF1(1)    --------->ARR14(2)          <----------DOF2 <---------HSFB2a(2)   --------->RAP2.3(1)   <---------GLK1(1)           <---------DAG2   --------->HSFB2a(2)  <---------ATERF1(1)       <-----   cttggggttccgattcaccgtgtcttcgtctcccctttcctccgctgcatccagaccgcttccgaagtcgttgccgccctctcagccgtcgatttcgatc  22345700                                                                           <---------AHL20(2)                       <---------ANAC58                      --------->RVE1(1)                       <---------ANAC58                    <---------GLK1(2) <---------AHL20(2)                   <---------ANAC58                     --------->YAB1   <---------AHL20(2)                   <---------ANAC58          <------ZmHOX2a(2)          <---------AHL20(1)           --------->At4g35610              --------->ARR11(3)<---------ARR11(3)           <---------At4g35610        --------->YAB1 --------->WOX13(1) <---------ARR11(3)       <-----------HVH21<----------DOF2     <---------ARR11(3)--------->ARR11(3) -ZmHOX2a(2)  ---------->DOF2  <---------ETT(2)   <-----------HVH21     --------->AHL20(1)         <-   ccattgctatgtcatctaaagacgtgctttccatcgacaatactaagatcaaggtcagtcagaatatctctctatatattttttgagaccagggtttgta  22345800                            <-----------HVH21                          --------->LBD16                         <---------ANAC58                                                      ------                         <---------ANAC58                                              <---------GLK1(2)                         <---------ANAC46                                             <--------ATHB1                         <---------ANAC55(1)                                          -------->HAHB4                         --------->ANAC55(2)                                          <---------ICU4                     <---------MYB46(3)                                              <---------ATHB12                     <------MYB46(1)       <---------YAB1                            --------->ICU4                     <------MYB83      --------->TOE2(3)                             <---------YAB1                    <---------AtMYB61 --------->ANAC55(2)                           <---------TOE2(3)                   <--------P         --------->ANAC46            <---------ZAT18  --------->YAB1                 <---------ZAT6    --------->TOE2(2)              --------->ZAT18 <---------AHL20(2)           <---------YAB1<---------ANAC55(2)               --------->ARR11(3)    <---------YAB1------ --------ZAT14   <-----------RAV1(1) <-------TEIL          --------->AHL20(1) --------->ICU4   ------   gtctagtggttttatgctagtgttggtccgtgtcatacatacgttataaaaaaaaaaaacatatattgtggactatggaaatttttaatgattctctaag  22345900  Previous    Next  AGI:  At3g60420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70569.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078); contains InterPro domain PRIB5 (InterPro:IPR012398) Range:  from: 22345399    to: 22346762    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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