Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 ----                                                                                            <-------GAMYB                                                                                           ----------                                                                                           <------MYB46(1)                                                                                           <---------MYB46(3)               <---------ARR14(2)         --------->ANAC55(2)                    <----------DOF2-----               ------->TEIL ---------->DOF2    <---------YAB1                 ------->TEIL <------MYB83               --------->ARR14(2)         <---------ANAC55(2)          <---------ZAT14  <------ZmHOX2a(1)    --------->TOE2(3)   ----------->GT1  --------->MYB52(1)            --------->ZAT14<---------TOE2(3) --------->YAB1--------->GLK1(2)  ----------->GT1         ----------->GT1    <---------CCA1(2)  <----   ctataatcttagacatgaatctggattagtaaaaggaggtaaatacctgatgactgaaacatgttaatccaagtgttctgaatcttttgaggatggttat  22333200                      <-------MYC3                      ------->MYC3               --------->At4g35610              <-----------RAV1(1)      --------->ZAT2  <-------MYC2      <---------At4g35610      --------->At4g35610     <-----------RAV1(1)                                                                     -------- ------ICU4  ------->MYC2                                                                    <------- ----->ATHB51------->MYC3                                                                    -------- ->GT1<---------ZAT2  ------->MYC2         --------->ANAC58                     ------>ZmHOX2a(1) ---->ICU4   <-------MYC2                  --------->ANAC58      --------->TOE2(3) <---------YAB1 -----YAB1   <-------MYC3          <-------TEIL               <-----------GT1   <----------DOF2   aattgctctgctgcatatgctgcatgtgtgatgaagatgcataagaagccagaggcattggatttaacctcgaagacgggtccttttgattaaaacctaa  22333300                                                         ---------->DOF2                                                     <---------LBD16                                                    ------->GAMYB                            <-------                                <----------DOF2     ----------->RAV1(1)                     ---------                            <---------CCA1(2)      --------->ANAC46                  --------->At4g35610                          <---------ICU4          -------->P                         <---------At4g35610 ->TOE1(3)             --------->WOX13(1)     <-----------GT1           --------->GLK1(1)   <-------- --MYB59             <---------ATHB12       <-----------GT1     ---------->DOF2      --------->ZAT18 ->TOE2(3)        <---------ALFIN1    <---------ATHB12 --------->LBD16  <---------GLK1(1)   <--------   actcaagctcaaacttagccccaatccatcatctctttcactcatttttctcaaccccagaaagaagaaagaagaattctgtctgggtgctcaagatttt  22333400                                                                                             --------                                                                                --------->ZAT14                                                                            --------------->AtSPL3                                                                           <---------At4g35610     <-                                                                           --------->At4g35610-------                                                                        <---------ZAT18      <-------                                                                 <---------ALFIN1            <-------     <------ZmHOX2a(1)                       --------->ARR11(3) <---------REM1(2)            -------- --RVE1(1)                                   <---------ARR11(3) --------->ZAT14 <---------ZAT14    <- >ARR11(3)                               ---------->DOF2        <---------ZAT14 <---------ZAT18    <- -GLK1(2)--------->ICU4<----------DOF2--------->TOE2(3)<---------At4g35610----------->RAV1(1)-------- -ARR11(3)   --------->AHL20(2)    <----------DOF2    <---------ALFIN1  --------->ZAT18  ---------->DOF2   taagcgaggaaatgaataaatgactctttctctctctctttcttaaagatgttgtgccactgcctctacacttgtgcagcagtacagtttcaaaagatat  22333500                                                             *TSS                                                       <---------ANAC46                                                       --------->ALFIN1       <---------AHL20(2)                            <---------MYB46(3)       --------->AHL20(2)                           <---------AtMYB61 ->ARR14(2)                                         --------->ALFIN1                   <-----------HVH21 --------ANAC46                                    <-------GAMYB                  <---------ANAC58 -->CCA1(2)                                  --------->CCA1(2)                    <---------ANAC58 --ARR11(3)                                 --------->ARR14(2)                    <---------ANAC46 --ARR14(2)                                 <---------ARR14(2)               <---------ICU4 ->ARR11(1)<---------AHL20(2)               --------->ARR11(1)               --------->YAB1 --------ANAC58                             <---------ARR11(3)              <---------ATHB12 --------ANAC58      ---------->DOF2        --------->ARR11(3)              --------->ICU4 ->ARR11(3)--------->AHL20(2)         ---------->DOF2--------->ALFIN1   ------------>CBF   ggcttatatttatttatatatgcaaaagagttttttcagacaaagagatatggggttgtggggaggcttagggtttcaatgatgacttgtgtcagagaga  22333600               <---------YAB1             --------->YAB1             <---------ICU4            --------->ICU4            <---------ATHB12                                                                   <-----        ------------>CBF                                                                <------ZmHOX2a(1)       --------->TOE1(3)                                                             <-----------RAV1(2)       --------->TOE2(3)                                   <-----------GT1     --------->AHL20(2) <--   <---------MYB52(1)                                    <---------AHL20(2)<---------YAB1  --------->ICU4  <-----------HVH21   <-----------GT1              <----------DOF2    ----------->GT1<---------LBD16   cctctgttacctcaatgatgatatatactgcataaaaacctgcttccttctctctttattttaacttaaccatggttaaaattaaaaccaggagttatta  22333700                                                                                              -------                                                                                              <------MYB83                                                                                              <------MYB46(1)                                                                                              <------                                    --------->AHL20(2)                                       --------                                   <---------WOX13(1)                                        --------   --------->At4g35610   ----------->GT1  <---------YAB1                                    <--------   <---------At4g35610--------->YAB1<---------AHL20(2)                                     <---------MYB52(1)   --------->ANAC46  --------->MYB46(3) --------->YAB1                                   <---------ANAC58 <-----------GT1     <---------ATHB12  <---------YAB1                             --------->YAB1 ------GT1    <----------DOF2    --------->ATHB12     --------->DAG2             <---------ATHB12 --------DOF2 <---------DAG2   <---------WOX13(1)    ---------->DOF2     <----------DOF2 <---------ANAC58   ctttcacctcacatcccttttcaaccatggttaattgatttattataagaaaaaaaaaagtccaagtctcttgttctttctctatcattttccgtttggt  22333800                                                                    <---------YAB1                                                                 --------->GLK1(2)                                                                <---------GLK1(2)                                                          <---------YAB1                                                         --------->AHL20(1)                                                         <---------AHL20(1) ---->GT1               <-----------GT1                  <---------AHL20(2)                      <--- ---ANAC46           <---------ICU4                      --------->AHL20(2)                      ---- ->MYB46(2)       --------->TOE2(3)                    <---------YAB1                       --------- ->MYB59        <---------YAB1     --------->TOE2(2)  --------->AHL20(2)      --------->YAB1--------- -MYB55(1) <-----------GT1         --------->TOE1(2)  --------->AHL20(1)     <---------YAB1 ---------   atattgtaagttgtcactattcttaattacaaaataacctatgagcgtttttcaaatattatattagattcttatacatatgataaactcattcacccaa  22333900                                  --------->At4g35610                            >>>>>>>>>GATA-1                                                   -------                          ----------->GT1                                                     <------                   --------------->AGL15                                               <---------ANAC46                  ----------------->AGL3                    ---------->DOF2      <---------AHL20(2)   <---------ATHB12<---------------AGL15               --------->ARR11(3)        <---------YAB1------ ------ARR14(2)   =================================================================================== ----->ARR14(2)   ----------------->AGL2               <---------ARR11(3)       --------->AHL20(1)  < >ANAC58          <-----------------AGL2           ---------->DOF2              <---------AHL20(1)  < >ANAC46          <-----------------AGL3       --------->TOE2(3)      <---------MYB46(3)      <------ >ANAC58        <-----------GT1---------->DOF2 <----------DOF2--------->ICU4    --------->AHL20(2)<--   atccattcatgtgaggttttactaaatatagataaaagctgagtttctactttaaaagatactaaagattagtagttgacaatataattgagtagagatt  22334000       --------->LBD16                                                    <---------DAG2   ------->TEIL                                                      <---------WOX13(1)            -- --------->ZAT14                                                   --------->ATHB51              <--- <---------ZAT18                                                   --------->ATHB12              ---- -->ARR11(3)                                                      <---------YAB1                 ---- ---ARR11(3)                                                      --------->ICU4        <---------ANAC58 --->GLK1(2)                                          --------->ANAC46    <----------DOF2        <--- =============================MADS_MADS  <----------DOF2        --------->YAB1          <---------ANAC46 ---------ANAC58           ----------->GT1            --------->ANAC58   <---------ANAC58   --------- ---------ANAC58   ---------->DOF2    --------->ARR11(3)      --------->ANAC58          <---------ANAC58 ---GLK1(2)   --------------->AGL15   <---------ARR11(3)      --------->ANAC58     <-----------RAV1(1) -------ANAC46---------->DOF2  ---------->DOF2        --------->ANAC58   <---------ANAC58<----------DOF2   ttgtgtacccgagtttcaaagtaaagaaaatgtaaaagaagctctttttcaaaaacacacaaacaagcataattggctttttgtaatgtggctttcatta  22334100  Previous    Next  AGI:  At3g60390.1    Description:  HAT3 (homeobox-leucine zipper protein 3); transcription factor. Identical to Homeobox-leucine zipper protein HAT3 (HAT3) [Arabidopsis Thaliana] (GB:P46602;GB:Q546G9;GB:Q9M220); similar to homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein 4 [Arabidopsis thaliana] (TAIR:AT2G44910.1); similar to homeobox-leucine zipper protein [Glycine max] (GB:CAA63222.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain HD-ZIP protein, N-terminal; (InterPro:IPR00 Range:  from: 22331570    to: 22333561    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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